RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 A0A1B0GXF2 115 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 SDHAF1A6NFY7 115 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 LECT2O14960 151 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 FAM104BQ5XKR9 115 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 NRACQ8N912 160 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 C20orf203Q8NBC4 194 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 BAALCQ8WXS3 180 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 TMEM243Q9BU79 118 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 PGPEP1Q9NXJ5 209 aa7.37□□□□□ -1.23
VRK3-210ENST00000596121 IGKV2D-24A0A075B6R9 120 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 TMEM218A2RU14 115 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 TSHBP01222 138 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 ANGP03950 147 aaKnown RBP7.36□□□□□ -1.23
VRK3-210ENST00000596121 POLR2KP53803 58 aaKnown RBP7.36□□□□□ -1.23
VRK3-210ENST00000596121 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 COTL1Q14019 142 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 ELOBQ15370 118 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 MRPL51Q4U2R6 128 aaKnown RBP7.36□□□□□ -1.23
VRK3-210ENST00000596121 MRPL54Q6P161 138 aaKnown RBP7.36□□□□□ -1.23
VRK3-210ENST00000596121 KRTAP26-1Q6PEX3 210 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 KCNIP4Q6PIL6 250 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 CLPSL2Q6UWE3 100 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 LINC00269Q8N2A0 174 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 Q8N814 137 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 MRAP2Q96G30 205 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 TMEM70Q9BUB7 260 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 TM2D2Q9BX73 214 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
VRK3-210ENST00000596121 EREGO14944 169 aa7.35□□□□□ -1.23
VRK3-210ENST00000596121 AMTP48728 403 aa7.35□□□□□ -1.23
VRK3-210ENST00000596121 UQCC3Q6UW78 93 aa7.35□□□□□ -1.23
VRK3-210ENST00000596121 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
VRK3-210ENST00000596121 FAT1Q14517 4588 aa7.34□□□□□ -1.23
VRK3-210ENST00000596121 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.34□□□□□ -1.23
VRK3-210ENST00000596121 IGKV2-29A2NJV5 120 aaPredicted RBP7.34□□□□□ -1.23
VRK3-210ENST00000596121 I3L3M4 83 aa7.34□□□□□ -1.23
VRK3-210ENST00000596121 PKIAP61925 76 aa7.34□□□□□ -1.23
VRK3-210ENST00000596121 Q0VG73 95 aa7.34□□□□□ -1.23
VRK3-210ENST00000596121 PNRC1Q12796 327 aaPredicted RBP7.34□□□□□ -1.23
VRK3-210ENST00000596121 COMMD7Q86VX2 200 aa7.34□□□□□ -1.23
VRK3-210ENST00000596121 TMEM242Q9NWH2 141 aa7.34□□□□□ -1.23
VRK3-210ENST00000596121 TRBV27A0A0K0K1C4 114 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 A0A1B0GUV1 79 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 A0A1B0GW15 77 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 PPP1R2P9O14990 202 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 MT-ND4LP03901 98 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 ESDP10768 282 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 PMCHP20382 165 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 HBBP68871 147 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 CDPF1Q6NVV7 123 aa7.33□□□□□ -1.24
VRK3-210ENST00000596121 F8W036 122 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 CDK2AP2O75956 126 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 APCSP02743 223 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 REG3AQ06141 175 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 MIAQ16674 131 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 ANAPC16Q96DE5 110 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 RMI2Q96E14 147 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 COX11Q9Y6N1 276 aa7.32□□□□□ -1.24
VRK3-210ENST00000596121 IGLV5-52A0A0A0MRZ9 124 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 D6R8Y8 96 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 UBE2L6O14933 153 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 CRPP02741 224 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 FGF6P10767 208 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 CKS2P33552 79 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 XGP55808 180 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
VRK3-210ENST00000596121 C10orf91Q5T1B1 145 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 NTN5Q8WTR8 489 aaPredicted RBP7.31□□□□□ -1.24
VRK3-210ENST00000596121 C1orf43Q9BWL3 253 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
VRK3-210ENST00000596121 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 IGLV10-54A0A075B6I4 117 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.3□□□□□ -1.24
VRK3-210ENST00000596121 TRBV24-1A0A075B6N3 115 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 VCYO14598 125 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 TNFRSF6BO95407 300 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 NPYP01303 97 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 GCSHP23434 173 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 ATP5L2Q7Z4Y8 100 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 SEC11CQ9BY50 192 aa7.3□□□□□ -1.24
VRK3-210ENST00000596121 H7C423 109 aa7.29□□□□□ -1.24
VRK3-210ENST00000596121 S100A8P05109 93 aa7.29□□□□□ -1.24
VRK3-210ENST00000596121 LINC01620Q4KN68 170 aa7.29□□□□□ -1.24
VRK3-210ENST00000596121 USP17L23D6RBM5 183 aa7.28□□□□□ -1.24
VRK3-210ENST00000596121 HLA-DQA1P01909 254 aa7.28□□□□□ -1.24
VRK3-210ENST00000596121 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
VRK3-210ENST00000596121 RNASEKQ6P5S7 137 aaKnown RBP7.28□□□□□ -1.24
VRK3-210ENST00000596121 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
VRK3-210ENST00000596121 FAM30AQ9NZY2 134 aa7.28□□□□□ -1.24
VRK3-210ENST00000596121 IGKV3OR2-268A0A0C4DH90 116 aa7.27□□□□□ -1.25
VRK3-210ENST00000596121 PPP1R17O96001 155 aa7.27□□□□□ -1.25
VRK3-210ENST00000596121 PRSS1P07477 247 aa7.27□□□□□ -1.25
VRK3-210ENST00000596121 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
VRK3-210ENST00000596121 HAMPP81172 84 aa7.27□□□□□ -1.25
VRK3-210ENST00000596121 TMEM136Q6ZRR5 245 aa7.27□□□□□ -1.25
VRK3-210ENST00000596121 FAM104AQ969W3 186 aa7.27□□□□□ -1.25
VRK3-210ENST00000596121 IMMP2LQ96T52 175 aa7.27□□□□□ -1.25
VRK3-210ENST00000596121 CARHSP1Q9Y2V2 147 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms