RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 UBE2WQ96B02 151 aa9.2□□□□□ -0.94
SHKBP1-207ENST00000595631 TMEM70Q9BUB7 260 aa9.2□□□□□ -0.94
SHKBP1-207ENST00000595631 CHCHD7Q9BUK0 85 aa9.2□□□□□ -0.94
SHKBP1-207ENST00000595631 DNAH11Q96DT5 4516 aa9.2□□□□□ -0.94
SHKBP1-207ENST00000595631 A0A087WTM6 91 aa9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 PSCAO43653 123 aa9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 ANGP03950 147 aaKnown RBP9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 PMCHP20382 165 aa9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 CLPSL2Q6UWE3 100 aa9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 ATP5L2Q7Z4Y8 100 aa9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 SPATA12Q7Z6I5 190 aa9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 TMEM242Q9NWH2 141 aa9.19□□□□□ -0.94
SHKBP1-207ENST00000595631 TRAV8-3A0A0A6YYJ7 113 aa9.18□□□□□ -0.94
SHKBP1-207ENST00000595631 I3L3M4 83 aa9.18□□□□□ -0.94
SHKBP1-207ENST00000595631 TSHBP01222 138 aa9.18□□□□□ -0.94
SHKBP1-207ENST00000595631 S100A8P05109 93 aa9.18□□□□□ -0.94
SHKBP1-207ENST00000595631 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
SHKBP1-207ENST00000595631 ENHOQ6UWT2 76 aa9.18□□□□□ -0.94
SHKBP1-207ENST00000595631 CARHSP1Q9Y2V2 147 aaKnown RBP9.18□□□□□ -0.94
SHKBP1-207ENST00000595631 PKHD1P08F94 4074 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 IGLV4-60A0A075B6I1 120 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 IGKV2D-24A0A075B6R9 120 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 D6R8Y8 96 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 APCSP02743 223 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 CKS2P33552 79 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 PKIAP61925 76 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 WFDC2Q14508 124 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 ELOBQ15370 118 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 MAPKAPK5-AS1Q8N8E1 139 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 C20orf203Q8NBC4 194 aa9.17□□□□□ -0.94
SHKBP1-207ENST00000595631 C7orf77A4D0Y5 90 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 UBE2L6O14933 153 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 NPYP01303 97 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 CRPP02741 224 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 LINC00269Q8N2A0 174 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 CLRN3Q8NCR9 226 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 CTDSP1Q9GZU7 261 aa9.16□□□□□ -0.94
SHKBP1-207ENST00000595631 TRBV27A0A0K0K1C4 114 aa9.15□□□□□ -0.94
SHKBP1-207ENST00000595631 LECT2O14960 151 aa9.15□□□□□ -0.94
SHKBP1-207ENST00000595631 TNFRSF6BO95407 300 aa9.15□□□□□ -0.94
SHKBP1-207ENST00000595631 IMMP2LQ96T52 175 aa9.15□□□□□ -0.94
SHKBP1-207ENST00000595631 TM2D2Q9BX73 214 aa9.15□□□□□ -0.94
SHKBP1-207ENST00000595631 DYNC1H1Q14204 4646 aaKnown RBP9.14□□□□□ -0.95
SHKBP1-207ENST00000595631 C16orf90A8MZG2 172 aa9.14□□□□□ -0.95
SHKBP1-207ENST00000595631 RPS10P5Q9NQ39 176 aa9.14□□□□□ -0.95
SHKBP1-207ENST00000595631 BIRC6Q9NR09 4857 aa9.14□□□□□ -0.95
SHKBP1-207ENST00000595631 A0A1B0GUV1 79 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 VCYO14598 125 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 EREGO14944 169 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 PPP1R17O96001 155 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 APOC3P02656 99 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 ESDP10768 282 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 Q0VG73 95 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 BAALCQ8WXS3 180 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 RMI2Q96E14 147 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 PRR34Q9NV39 138 aa9.13□□□□□ -0.95
SHKBP1-207ENST00000595631 IGLV10-54A0A075B6I4 117 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 TRBV24-1A0A075B6N3 115 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 FGF6P10767 208 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 REG3AQ06141 175 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 RHEBQ15382 184 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 AMMECR1LQ6DCA0 310 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 RNASEKQ6P5S7 137 aaKnown RBP9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 ORMDL3Q8N138 153 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 C20orf78Q9BR46 151 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 C1orf43Q9BWL3 253 aa9.12□□□□□ -0.95
SHKBP1-207ENST00000595631 PPBPP02775 128 aa9.11□□□□□ -0.95
SHKBP1-207ENST00000595631 FCER1GP30273 86 aa9.11□□□□□ -0.95
SHKBP1-207ENST00000595631 MIAQ16674 131 aa9.11□□□□□ -0.95
SHKBP1-207ENST00000595631 SMIM2Q9BVW6 85 aa9.11□□□□□ -0.95
SHKBP1-207ENST00000595631 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 IGKV3OR2-268A0A0C4DH90 116 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 H7C423 109 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 HLA-DQA1P01909 254 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 S100PP25815 95 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 KRTAP26-1Q6PEX3 210 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 Q8N814 137 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
SHKBP1-207ENST00000595631 TCAPO15273 167 aa9.09□□□□□ -0.95
SHKBP1-207ENST00000595631 RPL32P62910 135 aaKnown RBP9.09□□□□□ -0.95
SHKBP1-207ENST00000595631 SVBPQ8N300 66 aa9.09□□□□□ -0.95
SHKBP1-207ENST00000595631 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
SHKBP1-207ENST00000595631 LOC389332A0A1B0GUA5 103 aa9.08□□□□□ -0.96
SHKBP1-207ENST00000595631 PHOX2AO14813 284 aa9.08□□□□□ -0.96
SHKBP1-207ENST00000595631 KIAA1644Q3SXP7 199 aa9.08□□□□□ -0.96
SHKBP1-207ENST00000595631 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.07□□□□□ -0.96
SHKBP1-207ENST00000595631 SNAPINO95295 136 aa9.07□□□□□ -0.96
SHKBP1-207ENST00000595631 RPL39P62891 51 aaKnown RBP9.07□□□□□ -0.96
SHKBP1-207ENST00000595631 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
SHKBP1-207ENST00000595631 PGPEP1Q9NXJ5 209 aa9.07□□□□□ -0.96
SHKBP1-207ENST00000595631 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
SHKBP1-207ENST00000595631 TGIF2-C20orf24A0A0A6YYL0 155 aa9.06□□□□□ -0.96
SHKBP1-207ENST00000595631 ZNF25P17030 456 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms