RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 VSIG2Q96IQ7 327 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 TRACP01848 142 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 HAMPP81172 84 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 LINC01548A6NM66 108 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 IGF1P05019 195 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 COX7B2Q8TF08 81 aa9.6□□□□□ -0.87
DNMT1-228ENST00000592705 FLNBO75369 2602 aaKnown RBP9.6□□□□□ -0.87
DNMT1-228ENST00000592705 ZFAND3Q9H8U3 227 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 CEP192Q8TEP8 1941 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 DEFB131BA0A096LNP1 70 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 H3BT86 120 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 C5orf38Q86SI9 138 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 LY6G6CO95867 125 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 MTORP42345 2549 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 PTPRSQ13332 1948 aa9.59□□□□□ -0.87
DNMT1-228ENST00000592705 HHLA3Q9XRX5 114 aa9.59□□□□□ -0.88
DNMT1-228ENST00000592705 TRAV4A0A0B4J268 109 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 B5MCH6 92 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 LGALS9O00182 355 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 CAMK2N2Q96S95 79 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 PRR14LQ5THK1 2151 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 EP400Q96L91 3159 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 USP9XQ93008 2570 aaPredicted RBP9.57□□□□□ -0.88
DNMT1-228ENST00000592705 A0A0B4J2C4 111 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 TIRAPP58753 221 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 OPRPNQ99935 248 aaPredicted RBP9.57□□□□□ -0.88
DNMT1-228ENST00000592705 DAND5Q8N907 189 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
DNMT1-228ENST00000592705 C20orf173Q96LM9 149 aa9.56□□□□□ -0.88
DNMT1-228ENST00000592705 POLQO75417 2590 aa9.56□□□□□ -0.88
DNMT1-228ENST00000592705 NDUFA7O95182 113 aa9.56□□□□□ -0.88
DNMT1-228ENST00000592705 RPL18AQ02543 176 aaKnown RBP9.56□□□□□ -0.88
DNMT1-228ENST00000592705 TCL1BO95988 128 aa9.56□□□□□ -0.88
DNMT1-228ENST00000592705 TRAV10A0A0B4J240 114 aa9.55□□□□□ -0.88
DNMT1-228ENST00000592705 LINC00310P59036 64 aa9.55□□□□□ -0.88
DNMT1-228ENST00000592705 CITED1Q99966 193 aa9.55□□□□□ -0.88
DNMT1-228ENST00000592705 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
DNMT1-228ENST00000592705 FAM110AQ9BQ89 295 aa9.55□□□□□ -0.88
DNMT1-228ENST00000592705 MIAQ16674 131 aa9.55□□□□□ -0.88
DNMT1-228ENST00000592705 IGKV2D-26A0A0A0MRZ7 120 aa9.55□□□□□ -0.88
DNMT1-228ENST00000592705 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 KIAA1549Q9HCM3 1950 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 C2CD3Q4AC94 2353 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 CLEC2BQ92478 149 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 ZFAND2AQ8N6M9 145 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 PTH2Q96A98 100 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
DNMT1-228ENST00000592705 SPANXB1Q9NS25 103 aaPredicted RBP9.54□□□□□ -0.88
DNMT1-228ENST00000592705 COX7A2LO14548 114 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 MIFP14174 115 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 C2orf91Q6ZV80 131 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 Q8N6K4 173 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 PRB2P02812 416 aaPredicted RBP9.53□□□□□ -0.88
DNMT1-228ENST00000592705 TMEM263Q8WUH6 116 aaKnown RBP9.53□□□□□ -0.88
DNMT1-228ENST00000592705 MAPKAPK5-AS1Q8N8E1 139 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 SS18L2Q9UHA2 77 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 DEFB114Q30KQ6 69 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
DNMT1-228ENST00000592705 FN1P02751 2386 aaKnown RBP9.52□□□□□ -0.88
DNMT1-228ENST00000592705 LYRM9A8MSI8 78 aa9.52□□□□□ -0.88
DNMT1-228ENST00000592705 K7EQG2 157 aa9.52□□□□□ -0.88
DNMT1-228ENST00000592705 COL5A1P20908 1838 aaPredicted RBP9.52□□□□□ -0.88
DNMT1-228ENST00000592705 Q6ZUT4 128 aa9.52□□□□□ -0.89
DNMT1-228ENST00000592705 CDSNQ15517 529 aa9.52□□□□□ -0.89
DNMT1-228ENST00000592705 LINC00482Q8N8I6 264 aa9.52□□□□□ -0.89
DNMT1-228ENST00000592705 Q8N976 141 aa9.51□□□□□ -0.89
DNMT1-228ENST00000592705 HCFC1P51610 2035 aa9.51□□□□□ -0.89
DNMT1-228ENST00000592705 CEMP1Q6PRD7 247 aaPredicted RBP9.51□□□□□ -0.89
DNMT1-228ENST00000592705 CPAMD8Q8IZJ3 1885 aa9.51□□□□□ -0.89
DNMT1-228ENST00000592705 IGLV10-54A0A075B6I4 117 aa9.51□□□□□ -0.89
DNMT1-228ENST00000592705 TMEM223A0PJW6 202 aa9.51□□□□□ -0.89
DNMT1-228ENST00000592705 RBX1P62877 108 aa9.51□□□□□ -0.89
DNMT1-228ENST00000592705 RS1O15537 224 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 NRACQ8N912 160 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 TNRC6BQ9UPQ9 1833 aaKnown RBP9.5□□□□□ -0.89
DNMT1-228ENST00000592705 ATOX1O00244 68 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 H3BQ85 93 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 USP9YO00507 2555 aaPredicted RBP9.5□□□□□ -0.89
DNMT1-228ENST00000592705 SRCAPQ6ZRS2 3230 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 CXCL5P42830 114 aa9.5□□□□□ -0.89
DNMT1-228ENST00000592705 FAM236AA0A1B0GUQ0 79 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 FAM236BA0A1B0GV22 79 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 ZNF22P17026 224 aaPredicted RBP9.49□□□□□ -0.89
DNMT1-228ENST00000592705 MIR7-3HGQ8N6C7 128 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 ZNF702PQ9H963 129 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 M0QY20 66 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 P0DMU3 169 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms