RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 C10orf91Q5T1B1 145 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 RASL11AQ6T310 242 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 SH2D6Q7Z4S9 175 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 ATP5L2Q7Z4Y8 100 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 AMN1Q8IY45 258 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 ATP6V0E2Q8NHE4 81 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 ZNRF2Q8NHG8 242 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 TMEM191AQ9H0A3 160 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 Q9UF83 564 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 MRPS16Q9Y3D3 137 aaKnown RBP4.41□□□□□ -1.7
VPS4B-205ENST00000591383 LINC00588Q9Y4M8 146 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 KMT2AQ03164 3969 aa4.41□□□□□ -1.7
VPS4B-205ENST00000591383 TRBV7-3A0A075B6L6 115 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 A0A1B0GXF2 115 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 M0QY20 66 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 LINC00315P59091 139 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 ESRGQ1W209 222 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 OR10J3Q5JRS4 329 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 WFDC10BQ8IUB3 73 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.4□□□□□ -1.71
VPS4B-205ENST00000591383 RPL39LQ96EH5 51 aaKnown RBP4.4□□□□□ -1.71
VPS4B-205ENST00000591383 BTF3L4Q96K17 158 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 FRAS1Q86XX4 4008 aa4.4□□□□□ -1.71
VPS4B-205ENST00000591383 A0A087WWC5 75 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 M0R2N4 97 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 UBE2D3P61077 147 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 UBE2D2P62837 147 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 MRPL51Q4U2R6 128 aaKnown RBP4.39□□□□□ -1.71
VPS4B-205ENST00000591383 NRACQ8N912 160 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 GATD1Q8NB37 220 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 DEFB104AQ8WTQ1 72 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 MRAP2Q96G30 205 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 RNF185Q96GF1 192 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 GTSF1LQ9H1H1 148 aa4.39□□□□□ -1.71
VPS4B-205ENST00000591383 TRAV9-1A0A075B6T8 112 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 D6R8Y8 96 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 GAS8-AS1O95177 125 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 RAB4AP20338 218 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 CKS2P33552 79 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 RPS10P46783 165 aaKnown RBP4.38□□□□□ -1.71
VPS4B-205ENST00000591383 TTC32Q5I0X7 151 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 LELP1Q5T871 98 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 FAM104BQ5XKR9 115 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 ATRAIDQ6UW56 229 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 LYPD5Q6UWN5 251 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 CBLN2Q8IUK8 224 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 DNAJC30Q96LL9 226 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 IMMP2LQ96T52 175 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 NIT2Q9NQR4 276 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 HYDINQ4G0P3 5121 aa4.38□□□□□ -1.71
VPS4B-205ENST00000591383 IGLV5-37A0A075B6J1 123 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 TGIF2-C20orf24A0A0A6YYL0 155 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 SDHAF1A6NFY7 115 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 SIVA1O15304 175 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 IGHV3-30P01768 117 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 IGHV3-33P01772 117 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 APCSP02743 223 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 IGHV3-30-3P0DP02 117 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 IGHV3-30-5P0DP03 117 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 COTL1Q14019 142 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 DAZ4Q86SG3 579 aaKnown RBP4.37□□□□□ -1.71
VPS4B-205ENST00000591383 FRZBQ92765 325 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 CHCHD5Q9BSY4 110 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 UPK3BQ9BT76 320 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 DAZ3Q9NR90 486 aaKnown RBP4.37□□□□□ -1.71
VPS4B-205ENST00000591383 TMEM242Q9NWH2 141 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 RYR3Q15413 4870 aa4.37□□□□□ -1.71
VPS4B-205ENST00000591383 TRBV25-1A0A075B6N4 114 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 TRBV6-8A0A0A6YYG3 113 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 IGHV1-24A0A0C4DH33 117 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 NBDYA0A0U1RRE5 68 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 UBE2L6O14933 153 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 NPYP01303 97 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 HLA-DQA1P01909 254 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 SLPIP03973 132 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 PMCHP20382 165 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 GAGE6Q13070 117 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 TMEM97Q5BJF2 176 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 TMEM136Q6ZRR5 245 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 ORMDL3Q8N138 153 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 PRELID3AQ96N28 172 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 TMEM243Q9BU79 118 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
VPS4B-205ENST00000591383 DNAH2Q9P225 4427 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 A0A087WX48 190 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 TRBV6-5A0A0K0K1A5 114 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 TMEM262E9PQX1 116 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 ATP6V1G1O75348 118 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 PPP1R17O96001 155 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 PPBPP02775 128 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 MT-ND6P03923 174 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 FCER1GP30273 86 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 ELOBQ15370 118 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 KIAA1644Q3SXP7 199 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms