RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 WFDC10BQ8IUB3 73 aa12.12□□□□□ -0.47
VAT1-208ENST00000590924 RPL39LQ96EH5 51 aaKnown RBP12.12□□□□□ -0.47
VAT1-208ENST00000590924 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
VAT1-208ENST00000590924 TRBV6-8A0A0A6YYG3 113 aa12.11□□□□□ -0.47
VAT1-208ENST00000590924 ATRAIDQ6UW56 229 aa12.11□□□□□ -0.47
VAT1-208ENST00000590924 GNB1LQ9BYB4 327 aa12.11□□□□□ -0.47
VAT1-208ENST00000590924 ST20Q9HBF5 79 aa12.11□□□□□ -0.47
VAT1-208ENST00000590924 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 PHOX2AO14813 284 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 DNAH10OSP0CZ25 163 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 ELOBQ15370 118 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 TMEM136Q6ZRR5 245 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 NRACQ8N912 160 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 C20orf78Q9BR46 151 aa12.1□□□□□ -0.47
VAT1-208ENST00000590924 A0A087WTM6 91 aa12.09□□□□□ -0.47
VAT1-208ENST00000590924 IGHV3-38A0A0C4DH36 116 aa12.09□□□□□ -0.47
VAT1-208ENST00000590924 NCR2O95944 276 aa12.09□□□□□ -0.47
VAT1-208ENST00000590924 HLA-DQA1P01909 254 aa12.09□□□□□ -0.47
VAT1-208ENST00000590924 RPS10P46783 165 aaKnown RBP12.09□□□□□ -0.47
VAT1-208ENST00000590924 POLR2KP53803 58 aaKnown RBP12.09□□□□□ -0.47
VAT1-208ENST00000590924 ORMDL3Q8N138 153 aa12.09□□□□□ -0.47
VAT1-208ENST00000590924 SMCO4Q9NRQ5 59 aa12.09□□□□□ -0.47
VAT1-208ENST00000590924 SMKR1H3BMG3 65 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 VCYO14598 125 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 MT-ND6P03923 174 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 PKIAP61925 76 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 RPL32P62910 135 aaKnown RBP12.08□□□□□ -0.48
VAT1-208ENST00000590924 IQCJQ1A5X6 159 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 LINC01556Q5JQF7 62 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 NTM-AS1Q6ZSK4 140 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 TMEM70Q9BUB7 260 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 LAMTOR2Q9Y2Q5 125 aa12.08□□□□□ -0.48
VAT1-208ENST00000590924 TRBV25-1A0A075B6N4 114 aa12.07□□□□□ -0.48
VAT1-208ENST00000590924 TRBV27A0A0K0K1C4 114 aa12.07□□□□□ -0.48
VAT1-208ENST00000590924 D6R8Y8 96 aa12.07□□□□□ -0.48
VAT1-208ENST00000590924 I3L3M4 83 aa12.07□□□□□ -0.48
VAT1-208ENST00000590924 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
VAT1-208ENST00000590924 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.48
VAT1-208ENST00000590924 SUMO2P61956 95 aaKnown RBP12.07□□□□□ -0.48
VAT1-208ENST00000590924 COTL1Q14019 142 aa12.07□□□□□ -0.48
VAT1-208ENST00000590924 C10orf126Q8N4M7 172 aa12.07□□□□□ -0.48
VAT1-208ENST00000590924 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
VAT1-208ENST00000590924 PMCHP20382 165 aa12.06□□□□□ -0.48
VAT1-208ENST00000590924 YPEL4Q96NS1 127 aa12.06□□□□□ -0.48
VAT1-208ENST00000590924 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
VAT1-208ENST00000590924 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
VAT1-208ENST00000590924 EPM2AB3EWF7 344 aa12.05□□□□□ -0.48
VAT1-208ENST00000590924 APCSP02743 223 aa12.05□□□□□ -0.48
VAT1-208ENST00000590924 NIT1Q86X76 327 aa12.05□□□□□ -0.48
VAT1-208ENST00000590924 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
VAT1-208ENST00000590924 TGIF2-C20orf24A0A0A6YYL0 155 aa12.04□□□□□ -0.48
VAT1-208ENST00000590924 TCAPO15273 167 aa12.04□□□□□ -0.48
VAT1-208ENST00000590924 XGP55808 180 aa12.04□□□□□ -0.48
VAT1-208ENST00000590924 NPYP01303 97 aa12.03□□□□□ -0.48
VAT1-208ENST00000590924 KIR2DL4Q99706 377 aa12.03□□□□□ -0.48
VAT1-208ENST00000590924 TMEM243Q9BU79 118 aa12.03□□□□□ -0.48
VAT1-208ENST00000590924 AMTP48728 403 aa12.02□□□□□ -0.49
VAT1-208ENST00000590924 KRTAP10-1P60331 282 aa12.02□□□□□ -0.49
VAT1-208ENST00000590924 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.49
VAT1-208ENST00000590924 A0A087WX48 190 aa12.01□□□□□ -0.49
VAT1-208ENST00000590924 H7C423 109 aa12.01□□□□□ -0.49
VAT1-208ENST00000590924 TSHBP01222 138 aa12.01□□□□□ -0.49
VAT1-208ENST00000590924 CBLN2Q8IUK8 224 aa12.01□□□□□ -0.49
VAT1-208ENST00000590924 SMIM2Q9BVW6 85 aa12.01□□□□□ -0.49
VAT1-208ENST00000590924 MRPL18Q9H0U6 180 aaKnown RBP12.01□□□□□ -0.49
VAT1-208ENST00000590924 TMEM262E9PQX1 116 aa12□□□□□ -0.49
VAT1-208ENST00000590924 A0A1B0GUV1 79 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 IBA57-AS1B1ANH7 110 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 ESDP10768 282 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 S100A1P23297 94 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 FABP9Q0Z7S8 132 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 TRAPPC1Q9Y5R8 145 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 FAT1Q14517 4588 aa11.99□□□□□ -0.49
VAT1-208ENST00000590924 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 IGHV3-33P01772 117 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 IGHV3-30-3P0DP02 117 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 GCSHP23434 173 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 FCER1GP30273 86 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 LAGE3Q14657 143 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 KIAA1644Q3SXP7 199 aa11.98□□□□□ -0.49
VAT1-208ENST00000590924 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
VAT1-208ENST00000590924 K7EMI3 77 aa11.97□□□□□ -0.49
VAT1-208ENST00000590924 UBE2L6O14933 153 aa11.97□□□□□ -0.49
VAT1-208ENST00000590924 PSCAO43653 123 aa11.97□□□□□ -0.49
VAT1-208ENST00000590924 ALKBH7Q9BT30 221 aaPredicted RBP11.97□□□□□ -0.49
VAT1-208ENST00000590924 GAGE6Q13070 117 aa11.96□□□□□ -0.49
VAT1-208ENST00000590924 Q5VSD8 79 aa11.96□□□□□ -0.49
VAT1-208ENST00000590924 Q8N8P6 123 aa11.96□□□□□ -0.49
VAT1-208ENST00000590924 DEFB104AQ8WTQ1 72 aa11.96□□□□□ -0.49
VAT1-208ENST00000590924 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.49
VAT1-208ENST00000590924 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.49
VAT1-208ENST00000590924 RAB5AP20339 215 aa11.95□□□□□ -0.5
VAT1-208ENST00000590924 RBX1P62877 108 aa11.95□□□□□ -0.5
VAT1-208ENST00000590924 SMAGPQ0VAQ4 97 aa11.95□□□□□ -0.5
VAT1-208ENST00000590924 MPV17L2Q567V2 206 aa11.95□□□□□ -0.5
VAT1-208ENST00000590924 INAFM2P0DMQ5 153 aa11.94□□□□□ -0.5
VAT1-208ENST00000590924 ZNF25P17030 456 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms