RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 H7C1H1 209 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 CTRLP40313 264 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 NKX2-5P52952 324 aaPredicted RBP6.59□□□□□ -1.35
RETREG3-209ENST00000590035 WDR73Q6P4I2 378 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 RASL11AQ6T310 242 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 C9orf62Q8N4C0 152 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 C15orf56Q8N910 161 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 OR2D3Q8NGH3 330 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 RNF185Q96GF1 192 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 TMEM243Q9BU79 118 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
RETREG3-209ENST00000590035 A0A087WYN8 130 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 KANTRA0A1W2PQU2 76 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 RAB19A4D1S5 217 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 F2Z2F3 143 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 SSTP61278 116 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 NIT2Q9NQR4 276 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 PLAC8Q9NZF1 115 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 GNG13Q9P2W3 67 aa6.58□□□□□ -1.36
RETREG3-209ENST00000590035 IGHV3-64A0A075B6Q5 118 aa6.57□□□□□ -1.36
RETREG3-209ENST00000590035 hDV102S1A0JD36 115 aa6.57□□□□□ -1.36
RETREG3-209ENST00000590035 MGPP08493 103 aa6.57□□□□□ -1.36
RETREG3-209ENST00000590035 CHTF8P0CG12 524 aa6.57□□□□□ -1.36
RETREG3-209ENST00000590035 RAB5CP51148 216 aa6.57□□□□□ -1.36
RETREG3-209ENST00000590035 EIF5AP63241 154 aaKnown RBP6.57□□□□□ -1.36
RETREG3-209ENST00000590035 MEF2BQ02080 365 aaPredicted RBP6.57□□□□□ -1.36
RETREG3-209ENST00000590035 LYZL1Q6UWQ5 148 aa6.57□□□□□ -1.36
RETREG3-209ENST00000590035 DPH3P1Q9H4G8 78 aa6.57□□□□□ -1.36
RETREG3-209ENST00000590035 TRGC1P0CF51 173 aa6.56□□□□□ -1.36
RETREG3-209ENST00000590035 NTF3P20783 257 aa6.56□□□□□ -1.36
RETREG3-209ENST00000590035 GNG4P50150 75 aa6.56□□□□□ -1.36
RETREG3-209ENST00000590035 SULT1A2P50226 295 aa6.56□□□□□ -1.36
RETREG3-209ENST00000590035 GATD1Q8NB37 220 aa6.56□□□□□ -1.36
RETREG3-209ENST00000590035 PDE6DO43924 150 aa6.55□□□□□ -1.36
RETREG3-209ENST00000590035 NUDT10Q8NFP7 164 aa6.55□□□□□ -1.36
RETREG3-209ENST00000590035 NUDT11Q96G61 164 aa6.55□□□□□ -1.36
RETREG3-209ENST00000590035 TPPP3Q9BW30 176 aa6.55□□□□□ -1.36
RETREG3-209ENST00000590035 GVQW2A0A096LPI5 108 aaPredicted RBP6.54□□□□□ -1.36
RETREG3-209ENST00000590035 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.54□□□□□ -1.36
RETREG3-209ENST00000590035 XKRY2A2RUG3 117 aa6.54□□□□□ -1.36
RETREG3-209ENST00000590035 K7EN84 100 aa6.54□□□□□ -1.36
RETREG3-209ENST00000590035 IFNA1P01562 189 aa6.54□□□□□ -1.36
RETREG3-209ENST00000590035 BCL2P10415 239 aa6.54□□□□□ -1.36
RETREG3-209ENST00000590035 COTL1Q14019 142 aa6.54□□□□□ -1.36
RETREG3-209ENST00000590035 Q6ZNX1 250 aa6.54□□□□□ -1.36
RETREG3-209ENST00000590035 GAGE12HA6NDE8 117 aa6.53□□□□□ -1.36
RETREG3-209ENST00000590035 NCR2O95944 276 aa6.53□□□□□ -1.36
RETREG3-209ENST00000590035 AMTP48728 403 aa6.53□□□□□ -1.36
RETREG3-209ENST00000590035 GTSF1Q8WW33 167 aa6.53□□□□□ -1.36
RETREG3-209ENST00000590035 BIN3Q9NQY0 253 aa6.53□□□□□ -1.36
RETREG3-209ENST00000590035 AP5S1Q9NUS5 200 aa6.53□□□□□ -1.36
RETREG3-209ENST00000590035 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 FAM231BA6NCW3 169 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 H7C423 109 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 PHOX2AO14813 284 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 NDUFS6O75380 124 aaKnown RBP6.52□□□□□ -1.37
RETREG3-209ENST00000590035 RPS10P46783 165 aaKnown RBP6.52□□□□□ -1.37
RETREG3-209ENST00000590035 COX6A2Q02221 97 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 FOXI1Q12951 378 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 CHCHD10Q8WYQ3 142 aaPredicted RBP6.52□□□□□ -1.37
RETREG3-209ENST00000590035 RPL39LQ96EH5 51 aaKnown RBP6.52□□□□□ -1.37
RETREG3-209ENST00000590035 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.37
RETREG3-209ENST00000590035 MED9Q9NWA0 146 aa6.52□□□□□ -1.37
RETREG3-209ENST00000590035 TRBV6-5A0A0K0K1A5 114 aa6.51□□□□□ -1.37
RETREG3-209ENST00000590035 ESDP10768 282 aa6.51□□□□□ -1.37
RETREG3-209ENST00000590035 FOXA3P55318 350 aaPredicted RBP6.51□□□□□ -1.37
RETREG3-209ENST00000590035 PRR3P79522 188 aaKnown RBP6.51□□□□□ -1.37
RETREG3-209ENST00000590035 EIF5AL1Q6IS14 154 aaKnown RBP6.51□□□□□ -1.37
RETREG3-209ENST00000590035 CFAP161Q6P656 301 aa6.51□□□□□ -1.37
RETREG3-209ENST00000590035 OCC1Q8TAD7 63 aa6.51□□□□□ -1.37
RETREG3-209ENST00000590035 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
RETREG3-209ENST00000590035 RNASE7Q9H1E1 156 aaKnown RBP6.51□□□□□ -1.37
RETREG3-209ENST00000590035 TEX46H3BTG2 121 aa6.5□□□□□ -1.37
RETREG3-209ENST00000590035 UBE2L6O14933 153 aa6.5□□□□□ -1.37
RETREG3-209ENST00000590035 FGF6P10767 208 aa6.5□□□□□ -1.37
RETREG3-209ENST00000590035 TAGLN2P37802 199 aaKnown RBP6.5□□□□□ -1.37
RETREG3-209ENST00000590035 TWIST1Q15672 202 aa6.5□□□□□ -1.37
RETREG3-209ENST00000590035 TCTE3Q8IZS6 198 aa6.5□□□□□ -1.37
RETREG3-209ENST00000590035 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.49□□□□□ -1.37
RETREG3-209ENST00000590035 A0A096LNI7 61 aa6.49□□□□□ -1.37
RETREG3-209ENST00000590035 IGKV2-29A2NJV5 120 aaPredicted RBP6.49□□□□□ -1.37
RETREG3-209ENST00000590035 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
RETREG3-209ENST00000590035 H3BS24 57 aa6.49□□□□□ -1.37
RETREG3-209ENST00000590035 ZNF25P17030 456 aaPredicted RBP6.49□□□□□ -1.37
RETREG3-209ENST00000590035 HIGD2BQ4VC39 106 aa6.49□□□□□ -1.37
RETREG3-209ENST00000590035 FAM231DQ6ZW35 169 aa6.49□□□□□ -1.37
RETREG3-209ENST00000590035 OR5A1Q8NGJ0 315 aa6.49□□□□□ -1.37
RETREG3-209ENST00000590035 GAS8-AS1O95177 125 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 APCSP02743 223 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 KRTAP10-8P60410 259 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 TEX261Q6UWH6 196 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 SLC51BQ86UW2 128 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 LYPD6BQ8NI32 183 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 C7orf33Q8WU49 177 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 FAM210AQ96ND0 272 aa6.48□□□□□ -1.37
RETREG3-209ENST00000590035 LINC00959A0A1B0GUT2 108 aa6.47□□□□□ -1.37
RETREG3-209ENST00000590035 TMEM250H0YL14 139 aa6.47□□□□□ -1.37
RETREG3-209ENST00000590035 TSHBP01222 138 aa6.47□□□□□ -1.37
RETREG3-209ENST00000590035 POLR2KP53803 58 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms