RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 Q9UF83 564 aa3.6□□□□□ -1.83
LINC01539-202ENST00000589293 IGLV10-54A0A075B6I4 117 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 TRAV8-4A0A0B4J246 113 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 IGHV1-24A0A0C4DH33 117 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 PFDN1O60925 122 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 P01737 135 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 S100A9P06702 114 aaKnown RBP3.59□□□□□ -1.83
LINC01539-202ENST00000589293 GZMBP10144 247 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 SULT1A2P50226 295 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.83
LINC01539-202ENST00000589293 SSTP61278 116 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 REG3AQ06141 175 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 GAGE6Q13070 117 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 AP1S3Q96PC3 154 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 MED28Q9H204 178 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 PKIGQ9Y2B9 76 aa3.59□□□□□ -1.83
LINC01539-202ENST00000589293 TRBV6-1A0A0K0K1D8 114 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 MAP1LC3B2A6NCE7 125 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 FAM74A7A6NL05 159 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 MGPP08493 103 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 RBX1P62877 108 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 ZNF674Q2M3X9 581 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 PRR27Q6MZM9 219 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 GTSF1Q8WW33 167 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 AQP10Q96PS8 301 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 TPPP3Q9BW30 176 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 MAP1LC3BQ9GZQ8 125 aa3.58□□□□□ -1.84
LINC01539-202ENST00000589293 A0A087WYN8 130 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 FXYD6-FXYD2A0A087WZ82 144 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 IFITM10A6NMD0 228 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 LTAP01374 205 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 FHITP49789 147 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 CRIP1P50238 77 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 RAB5CP51148 216 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
LINC01539-202ENST00000589293 CNBPP62633 177 aaKnown RBP3.57□□□□□ -1.84
LINC01539-202ENST00000589293 RPL7L1Q6DKI1 246 aaKnown RBP3.57□□□□□ -1.84
LINC01539-202ENST00000589293 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 SDIM1Q6ZPB5 146 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 OR10AG1Q8NH19 301 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 TMEM243Q9BU79 118 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 PRR34Q9NV39 138 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 DNAH8Q96JB1 4490 aa3.57□□□□□ -1.84
LINC01539-202ENST00000589293 IGKV2-24A0A0C4DH68 120 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 IGKV3OR2-268A0A0C4DH90 116 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 MUC21A0A0G2JKD1 596 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 MUC21A0A140T8X8 626 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 XKRY2A2RUG3 117 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 CXCL1P09341 107 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 UBE2V1Q13404 147 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 COTL1Q14019 142 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 IQCJQ1A5X6 159 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 MAJINQ3KP22 176 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 AMMECR1LQ6DCA0 310 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 COX8CQ7Z4L0 72 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 BAGE2Q86Y30 109 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 LINC00474Q9P2X8 69 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 VAX2Q9UIW0 290 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 ALG5Q9Y673 324 aa3.56□□□□□ -1.84
LINC01539-202ENST00000589293 PHOX2AO14813 284 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 NDUFS6O75380 124 aaKnown RBP3.55□□□□□ -1.84
LINC01539-202ENST00000589293 GIPP09681 153 aaPredicted RBP3.55□□□□□ -1.84
LINC01539-202ENST00000589293 OR5AL1P0C617 328 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 TRGC1P0CF51 173 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 RPS10P46783 165 aaKnown RBP3.55□□□□□ -1.84
LINC01539-202ENST00000589293 RPS20P60866 119 aaKnown RBP3.55□□□□□ -1.84
LINC01539-202ENST00000589293 CACNG7P62955 275 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 RPL24P83731 157 aaKnown RBP3.55□□□□□ -1.84
LINC01539-202ENST00000589293 ZNF726P1Q15940 193 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 STPG4Q8N801 248 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 LYPD6BQ8NI32 183 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 SPACA4Q8TDM5 124 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 SFT2D1Q8WV19 159 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 KIF25-AS1Q9Y6Z4 181 aa3.55□□□□□ -1.84
LINC01539-202ENST00000589293 LRP1Q07954 4544 aaKnown RBP3.54□□□□□ -1.84
LINC01539-202ENST00000589293 UBR4Q5T4S7 5183 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 A0A1B0GV50 99 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 TEX46H3BTG2 121 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 PANO1I0J062 215 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 SNAI2O43623 268 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 CHTF8P0CG12 524 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 NKX2-5P52952 324 aaPredicted RBP3.54□□□□□ -1.84
LINC01539-202ENST00000589293 IFITM3Q01628 133 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 COX6A2Q02221 97 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 CIRBPQ14011 172 aaKnown RBP3.54□□□□□ -1.84
LINC01539-202ENST00000589293 RNASEKQ6P5S7 137 aaKnown RBP3.54□□□□□ -1.84
LINC01539-202ENST00000589293 RASL11AQ6T310 242 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 NTM-AS1Q6ZSK4 140 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 SMIM15Q7Z3B0 74 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 KCNRGQ8N5I3 272 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 FER1L6-AS1Q8NA97 138 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 FAM213BQ8TBF2 198 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 BTF3L4Q96K17 158 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 BIN3Q9NQY0 253 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 PLAC8Q9NZF1 115 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
LINC01539-202ENST00000589293 UMAD1C9J7I0 102 aa3.53□□□□□ -1.84
LINC01539-202ENST00000589293 F2Z2F3 143 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms