RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TRBV25-1A0A075B6N4 114 aa7.22□□□□□ -1.25
VPS25-202ENST00000589219 ADARB2-AS1A8MUL3 147 aa7.22□□□□□ -1.25
VPS25-202ENST00000589219 H3BRM9 83 aa7.22□□□□□ -1.25
VPS25-202ENST00000589219 HTN1P15515 57 aa7.22□□□□□ -1.25
VPS25-202ENST00000589219 CFAP126Q5VTH2 177 aa7.22□□□□□ -1.25
VPS25-202ENST00000589219 CST9LQ9H4G1 147 aa7.22□□□□□ -1.25
VPS25-202ENST00000589219 TNFRSF18Q9Y5U5 241 aa7.22□□□□□ -1.25
VPS25-202ENST00000589219 IGLV4-69A0A075B6H9 119 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 MYMXA0A1B0GTQ4 84 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 C11orf86A6NJI1 115 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 CRYBA4P53673 196 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 RPL39P62891 51 aaKnown RBP7.21□□□□□ -1.26
VPS25-202ENST00000589219 UBE2V1Q13404 147 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 HIST2H2BDQ6DRA6 164 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 NFE4Q86UQ8 179 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 C1orf158Q8N1D5 194 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 TMEM263Q8WUH6 116 aaKnown RBP7.21□□□□□ -1.26
VPS25-202ENST00000589219 C1QTNF4Q9BXJ3 329 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 XCL2Q9UBD3 114 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 PYGO1Q9Y3Y4 419 aa7.21□□□□□ -1.26
VPS25-202ENST00000589219 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
VPS25-202ENST00000589219 G3V4G9 280 aa7.2□□□□□ -1.26
VPS25-202ENST00000589219 VAMP3Q15836 100 aa7.2□□□□□ -1.26
VPS25-202ENST00000589219 KPRPQ5T749 579 aaPredicted RBP7.2□□□□□ -1.26
VPS25-202ENST00000589219 RNASE8Q8TDE3 154 aaKnown RBP7.2□□□□□ -1.26
VPS25-202ENST00000589219 PRADC1Q9BSG0 188 aa7.2□□□□□ -1.26
VPS25-202ENST00000589219 MRPL16Q9NX20 251 aaKnown RBP7.2□□□□□ -1.26
VPS25-202ENST00000589219 P0DMU3 169 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 FAM231AP0DMU4 169 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 FAM231CP0DMU5 169 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 GCSHP23434 173 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 PTTG1IPP53801 180 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 SAMD5Q5TGI4 173 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 CEND1Q8N111 149 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 C16orf74Q96GX8 76 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 TM2D2Q9BX73 214 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 SPANXA1Q9NS26 97 aa7.19□□□□□ -1.26
VPS25-202ENST00000589219 IGLV4-3A0A075B6K6 122 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 IGHV3-73A0A0B4J1V6 119 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 TRAV4A0A0B4J268 109 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 TRBV10-1A0A0K0K1A3 114 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 C9orf118A6NHY6 69 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 CIDEAO60543 219 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 PF4P02776 101 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 Q6ZVH6 145 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 TTTY13Q9BZ97 58 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 C19orf73Q9NVV2 129 aa7.18□□□□□ -1.26
VPS25-202ENST00000589219 TRGV1A0A0A0MS02 117 aa7.17□□□□□ -1.26
VPS25-202ENST00000589219 ZNF815PA8K554 130 aa7.17□□□□□ -1.26
VPS25-202ENST00000589219 AZU1P20160 251 aa7.17□□□□□ -1.26
VPS25-202ENST00000589219 DAZ2Q13117 558 aaKnown RBP7.17□□□□□ -1.26
VPS25-202ENST00000589219 COTL1Q14019 142 aa7.17□□□□□ -1.26
VPS25-202ENST00000589219 MAPKAPK5-AS1Q8N8E1 139 aa7.17□□□□□ -1.26
VPS25-202ENST00000589219 LINC00482Q8N8I6 264 aa7.17□□□□□ -1.26
VPS25-202ENST00000589219 OR4C5Q8NGB2 326 aa7.17□□□□□ -1.26
VPS25-202ENST00000589219 PRKDCP78527 4128 aaKnown RBP7.17□□□□□ -1.26
VPS25-202ENST00000589219 TRBV7-3A0A075B6L6 115 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 IGHV3OR16-12A0A075B7B8 117 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 K7EQD1 137 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 SMIM13P0DJ93 91 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 FXYD2P54710 66 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 AMELXQ99217 191 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 HIST1H4GQ99525 98 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 VCX2Q9H322 139 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 NOTCH3Q9UM47 2321 aa7.16□□□□□ -1.26
VPS25-202ENST00000589219 AGRNO00468 2067 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 LEPROTO15243 131 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 CCL25O15444 150 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 PRM2P04554 102 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 INSL3P51460 131 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 SMAGPQ0VAQ4 97 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 OXLD1Q5BKU9 147 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 TMEM170BQ5T4T1 132 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 Q6ZSN1 163 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 GTF2H5Q6ZYL4 71 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 ZNRF2Q8NHG8 242 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 MRAPQ8TCY5 172 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 PLEKHB2Q96CS7 222 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 CHCHD7Q9BUK0 85 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 TIMM21Q9BVV7 248 aa7.15□□□□□ -1.26
VPS25-202ENST00000589219 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 TMEM223A0PJW6 202 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 A6NJY4 79 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 PRB2P02812 416 aaPredicted RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 ZNF22P17026 224 aaPredicted RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 LGALS3P17931 250 aaKnown RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 RPL36AP83881 106 aaKnown RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 RRN3P1Q2M238 152 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 DAZ4Q86SG3 579 aaKnown RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 WFDC9Q8NEX5 89 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 DEFB104AQ8WTQ1 72 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 RPL36ALQ969Q0 106 aaKnown RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 DAZ3Q9NR90 486 aaKnown RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
VPS25-202ENST00000589219 UBE2D4Q9Y2X8 147 aa7.14□□□□□ -1.27
VPS25-202ENST00000589219 A0A1B0GWB2 263 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms