RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 SPATA12Q7Z6I5 190 aa7.87□□□□□ -1.15
RFX1-204ENST00000588885 WFDC10BQ8IUB3 73 aa7.87□□□□□ -1.15
RFX1-204ENST00000588885 SLC25A29Q8N8R3 303 aa7.87□□□□□ -1.15
RFX1-204ENST00000588885 RHODO00212 210 aa7.86□□□□□ -1.15
RFX1-204ENST00000588885 Q6ZSN1 163 aa7.86□□□□□ -1.15
RFX1-204ENST00000588885 C1orf196B1AJZ1 125 aa7.85□□□□□ -1.15
RFX1-204ENST00000588885 FUSP35637 526 aaKnown RBP eCLIP7.85□□□□□ -1.15
RFX1-204ENST00000588885 KRTAP10-2P60368 255 aa7.85□□□□□ -1.15
RFX1-204ENST00000588885 MRAP2Q96G30 205 aa7.85□□□□□ -1.15
RFX1-204ENST00000588885 TMA7Q9Y2S6 64 aaKnown RBP7.85□□□□□ -1.15
RFX1-204ENST00000588885 TRAV9-2A0A087WT02 112 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 F5H697 171 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 NPYP01303 97 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 CKS2P33552 79 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 IQCJQ1A5X6 159 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 ZFP2Q6ZN57 461 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 ORMDL3Q8N138 153 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 MAPKAPK5-AS1Q8N8E1 139 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 NRACQ8N912 160 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 RPL39LQ96EH5 51 aaKnown RBP7.84□□□□□ -1.15
RFX1-204ENST00000588885 PRADC1Q9BSG0 188 aa7.84□□□□□ -1.15
RFX1-204ENST00000588885 ALKBH7Q9BT30 221 aaPredicted RBP7.84□□□□□ -1.15
RFX1-204ENST00000588885 HIST1H2BKO60814 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BJP06899 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BOP23527 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BBP33778 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BDP58876 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 RAB5BP61020 215 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BCP62807 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 RHOHQ15669 191 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST2H2BEQ16778 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.83□□□□□ -1.16
RFX1-204ENST00000588885 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BHQ93079 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 PRELID3AQ96N28 172 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BNQ99877 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 HIST1H2BMQ99879 126 aa7.83□□□□□ -1.16
RFX1-204ENST00000588885 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 GAGE12JA6NER3 117 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 M0QY20 66 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 BTF3P20290 206 aaKnown RBP7.82□□□□□ -1.16
RFX1-204ENST00000588885 GAGE1Q13065 139 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 GAGE4Q13068 117 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 GAGE5Q13069 117 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 GAGE13Q4V321 117 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 OR10J3Q5JRS4 329 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 SH2D6Q7Z4S9 175 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 Q9UF83 564 aa7.82□□□□□ -1.16
RFX1-204ENST00000588885 EREGO14944 169 aa7.81□□□□□ -1.16
RFX1-204ENST00000588885 CIDEAO60543 219 aa7.81□□□□□ -1.16
RFX1-204ENST00000588885 CDK2AP2O75956 126 aa7.81□□□□□ -1.16
RFX1-204ENST00000588885 TNFRSF6BO95407 300 aa7.81□□□□□ -1.16
RFX1-204ENST00000588885 PPBPP02775 128 aa7.81□□□□□ -1.16
RFX1-204ENST00000588885 DNAH10OSP0CZ25 163 aa7.81□□□□□ -1.16
RFX1-204ENST00000588885 C18orf32Q8TCD1 76 aa7.81□□□□□ -1.16
RFX1-204ENST00000588885 TRAV8-6A0A0B4J262 113 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 IGHV3-38A0A0C4DH36 116 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 IGHV3-30P01768 117 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 IGHV3-30-3P0DP02 117 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 IGHV3-30-5P0DP03 117 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 NFE4Q86UQ8 179 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 ATP6V0E2Q8NHE4 81 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
RFX1-204ENST00000588885 LOC389332A0A1B0GUA5 103 aa7.79□□□□□ -1.16
RFX1-204ENST00000588885 H7C1H1 209 aa7.79□□□□□ -1.16
RFX1-204ENST00000588885 TIRAPP58753 221 aa7.79□□□□□ -1.16
RFX1-204ENST00000588885 LINC00310P59036 64 aa7.79□□□□□ -1.16
RFX1-204ENST00000588885 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
RFX1-204ENST00000588885 GTSF1LQ9H1H1 148 aa7.79□□□□□ -1.16
RFX1-204ENST00000588885 MAP1LC3AQ9H492 121 aa7.79□□□□□ -1.16
RFX1-204ENST00000588885 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
RFX1-204ENST00000588885 LELP1Q5T871 98 aa7.78□□□□□ -1.16
RFX1-204ENST00000588885 URB1-AS1Q96HZ7 61 aa7.78□□□□□ -1.16
RFX1-204ENST00000588885 SMIM2Q9BVW6 85 aa7.78□□□□□ -1.16
RFX1-204ENST00000588885 KRTAP4-9Q9BYQ8 210 aa7.78□□□□□ -1.16
RFX1-204ENST00000588885 Q9HAA7 133 aa7.78□□□□□ -1.16
RFX1-204ENST00000588885 A0A087WTM6 91 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 LINC00694P0DN24 101 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 NDUFA6P56556 154 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 SUMO2P61956 95 aaKnown RBP7.77□□□□□ -1.17
RFX1-204ENST00000588885 Q0VG73 95 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 C10orf126Q8N4M7 172 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 ST20Q9HBF5 79 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 NIT2Q9NQR4 276 aa7.77□□□□□ -1.17
RFX1-204ENST00000588885 SDHAF1A6NFY7 115 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 K7EP13 123 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 PSCAO43653 123 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 SERF1AO75920 110 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 PPP1R17O96001 155 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 IFI27P40305 119 aaPredicted RBP7.76□□□□□ -1.17
RFX1-204ENST00000588885 RNASEKQ6P5S7 137 aaKnown RBP7.76□□□□□ -1.17
RFX1-204ENST00000588885 BAGE3Q86Y29 109 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 DNAJC30Q96LL9 226 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 C20orf78Q9BR46 151 aa7.76□□□□□ -1.17
RFX1-204ENST00000588885 RPL32P62910 135 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms