RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 BORCS7Q96B45 105 aa9.47□□□□□ -0.89
DDX39A-208ENST00000588692 GFRA4Q9GZZ7 299 aa9.47□□□□□ -0.89
DDX39A-208ENST00000588692 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
DDX39A-208ENST00000588692 FAM231BA6NCW3 169 aa9.46□□□□□ -0.9
DDX39A-208ENST00000588692 FAM229AH3BQW9 127 aa9.46□□□□□ -0.9
DDX39A-208ENST00000588692 UBE2L6O14933 153 aa9.46□□□□□ -0.9
DDX39A-208ENST00000588692 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
DDX39A-208ENST00000588692 SMR3BP02814 79 aaPredicted RBP9.46□□□□□ -0.9
DDX39A-208ENST00000588692 HAMPP81172 84 aa9.46□□□□□ -0.9
DDX39A-208ENST00000588692 OSTCQ9NRP0 149 aa9.46□□□□□ -0.9
DDX39A-208ENST00000588692 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
DDX39A-208ENST00000588692 LINC00862A6NCI5 91 aa9.45□□□□□ -0.9
DDX39A-208ENST00000588692 AMTP48728 403 aa9.45□□□□□ -0.9
DDX39A-208ENST00000588692 REG3AQ06141 175 aa9.45□□□□□ -0.9
DDX39A-208ENST00000588692 CLLU1Q5K131 121 aa9.45□□□□□ -0.9
DDX39A-208ENST00000588692 CLPSL2Q6UWE3 100 aa9.45□□□□□ -0.9
DDX39A-208ENST00000588692 TSKUQ8WUA8 353 aa9.45□□□□□ -0.9
DDX39A-208ENST00000588692 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
DDX39A-208ENST00000588692 HIGD1CA8MV81 97 aa9.44□□□□□ -0.9
DDX39A-208ENST00000588692 USP17L23D6RBM5 183 aa9.44□□□□□ -0.9
DDX39A-208ENST00000588692 NCR2O95944 276 aa9.44□□□□□ -0.9
DDX39A-208ENST00000588692 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
DDX39A-208ENST00000588692 C20orf203Q8NBC4 194 aa9.44□□□□□ -0.9
DDX39A-208ENST00000588692 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
DDX39A-208ENST00000588692 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
DDX39A-208ENST00000588692 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
DDX39A-208ENST00000588692 KRTAP26-1Q6PEX3 210 aa9.42□□□□□ -0.9
DDX39A-208ENST00000588692 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
DDX39A-208ENST00000588692 FAT1Q14517 4588 aa9.41□□□□□ -0.9
DDX39A-208ENST00000588692 IGLV4-60A0A075B6I1 120 aa9.41□□□□□ -0.9
DDX39A-208ENST00000588692 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
DDX39A-208ENST00000588692 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
DDX39A-208ENST00000588692 TMEM191AQ9H0A3 160 aa9.41□□□□□ -0.9
DDX39A-208ENST00000588692 SRRM2Q9UQ35 2752 aaKnown RBP9.41□□□□□ -0.9
DDX39A-208ENST00000588692 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
DDX39A-208ENST00000588692 TRBV6-5A0A0K0K1A5 114 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 H7C423 109 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 APCSP02743 223 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 DGAT2L7PQ6IED9 249 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 CLRN3Q8NCR9 226 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 DEFB104AQ8WTQ1 72 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 ISOC2Q96AB3 205 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 SMDT1Q9H4I9 107 aa9.4□□□□□ -0.9
DDX39A-208ENST00000588692 IGLV10-54A0A075B6I4 117 aa9.4□□□□□ -0.91
DDX39A-208ENST00000588692 PRSS1P07477 247 aa9.4□□□□□ -0.91
DDX39A-208ENST00000588692 COMMD7Q86VX2 200 aa9.4□□□□□ -0.91
DDX39A-208ENST00000588692 V9GYV3 84 aa9.4□□□□□ -0.91
DDX39A-208ENST00000588692 DNAH8Q96JB1 4490 aa9.4□□□□□ -0.91
DDX39A-208ENST00000588692 I3L3M4 83 aa9.39□□□□□ -0.91
DDX39A-208ENST00000588692 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
DDX39A-208ENST00000588692 PEA15Q15121 130 aa9.39□□□□□ -0.91
DDX39A-208ENST00000588692 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
DDX39A-208ENST00000588692 SCXQ7RTU7 201 aa9.39□□□□□ -0.91
DDX39A-208ENST00000588692 MRAP2Q96G30 205 aa9.39□□□□□ -0.91
DDX39A-208ENST00000588692 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
DDX39A-208ENST00000588692 NAT8Q9UHE5 227 aa9.39□□□□□ -0.91
DDX39A-208ENST00000588692 PLA2G1BP04054 148 aaKnown RBP9.38□□□□□ -0.91
DDX39A-208ENST00000588692 RIGQ13278 110 aa9.38□□□□□ -0.91
DDX39A-208ENST00000588692 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
DDX39A-208ENST00000588692 NAT8BQ9UHF3 227 aa9.38□□□□□ -0.91
DDX39A-208ENST00000588692 ZNF25P17030 456 aaPredicted RBP9.37□□□□□ -0.91
DDX39A-208ENST00000588692 PMCHP20382 165 aa9.37□□□□□ -0.91
DDX39A-208ENST00000588692 ADIRFQ15847 76 aa9.37□□□□□ -0.91
DDX39A-208ENST00000588692 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
DDX39A-208ENST00000588692 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
DDX39A-208ENST00000588692 C9JQL5 133 aa9.36□□□□□ -0.91
DDX39A-208ENST00000588692 FGF6P10767 208 aa9.36□□□□□ -0.91
DDX39A-208ENST00000588692 RAB4AP20338 218 aa9.36□□□□□ -0.91
DDX39A-208ENST00000588692 C9orf163Q8N9P6 203 aa9.36□□□□□ -0.91
DDX39A-208ENST00000588692 RNF185Q96GF1 192 aa9.36□□□□□ -0.91
DDX39A-208ENST00000588692 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
DDX39A-208ENST00000588692 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
DDX39A-208ENST00000588692 PPP1R17O96001 155 aa9.35□□□□□ -0.91
DDX39A-208ENST00000588692 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
DDX39A-208ENST00000588692 RNASEKQ6P5S7 137 aaKnown RBP9.35□□□□□ -0.91
DDX39A-208ENST00000588692 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
DDX39A-208ENST00000588692 TRBV27A0A0K0K1C4 114 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 POLR2KP53803 58 aaKnown RBP9.34□□□□□ -0.91
DDX39A-208ENST00000588692 CTAG1AP78358 180 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 SRSF3P84103 164 aaKnown RBP9.34□□□□□ -0.91
DDX39A-208ENST00000588692 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 SMIM27A0A1W2PRY6 76 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 GAS8-AS1O95177 125 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 TSHBP01222 138 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 ESDP10768 282 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 RPS10P46783 165 aaKnown RBP9.34□□□□□ -0.91
DDX39A-208ENST00000588692 TMEM101Q96IK0 257 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 BTF3L4Q96K17 158 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 AP5S1Q9NUS5 200 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 TMEM242Q9NWH2 141 aa9.34□□□□□ -0.91
DDX39A-208ENST00000588692 A0A1B0GW15 77 aa9.33□□□□□ -0.92
DDX39A-208ENST00000588692 CFAP161Q6P656 301 aa9.33□□□□□ -0.92
DDX39A-208ENST00000588692 DMBT1Q9UGM3 2413 aaPredicted RBP9.33□□□□□ -0.92
DDX39A-208ENST00000588692 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
DDX39A-208ENST00000588692 IGKV3OR2-268A0A0C4DH90 116 aa9.32□□□□□ -0.92
DDX39A-208ENST00000588692 GAGE12HA6NDE8 117 aa9.32□□□□□ -0.92
DDX39A-208ENST00000588692 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
DDX39A-208ENST00000588692 FLG2Q5D862 2391 aaPredicted RBP9.31□□□□□ -0.92
DDX39A-208ENST00000588692 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms