RNA–Protein interactions for RNA: ENST00000586315.1

ATP6V0A1-210, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-210	ENST00000586315	PSMG3	Q9BT73	122 aa	Predicted RBP	-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	SMIM3	Q9BZL3	60 aa		-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	MRPL40	Q9NQ50	206 aa	Known RBP	-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	LINC00312	Q9Y6C7	94 aa		-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	ZNF609	O15014	1411 aa		-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	C10orf71	Q711Q0	1435 aa		-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	LAMC1	P11047	1609 aa		-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	ANKHD1	Q8IWZ3	2542 aa	Known RBP	-0.5	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	MYCBP2	O75592	4640 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315		K7EQZ3	153 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	LRP6	O75581	1613 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	SNCG	O76070	127 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	LINC00694	P0DN24	101 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	NEFH	P12036	1026 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	RRAS2	P62070	204 aa	Predicted RBP	-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	MORN2	Q502X0	79 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	NBEAL1	Q6ZS30	2694 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315		Q6ZUT4	128 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	TP53AIP1	Q9HCN2	124 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	SAR1A	Q9NR31	198 aa		-0.51	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	ZNF236	Q9UL36	1845 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	PRDM2	Q13029	1718 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	ERCC6L2	Q5T890	1561 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	BCL9L	Q86UU0	1499 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	PIP	P12273	146 aa	Predicted RBP	-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	CBLN1	P23435	193 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	SPAG11A	Q6PDA7	123 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	ZNF818P	Q6ZRF7	136 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	SEC11C	Q9BY50	192 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	AGPAT4-IT1	Q9H0P7	198 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	SPANXC	Q9NY87	97 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	FAT1	Q14517	4588 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	ABCA13	Q86UQ4	5058 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	CHD8	Q9HCK8	2581 aa		-0.52	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	LRRC37A3	O60309	1634 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	EP300	Q09472	2414 aa	Predicted RBP	-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	OVOS2	A0A0J9YW53	1432 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	OVOS2	Q6IE36	1432 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	CASKIN1	Q8WXD9	1431 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	LOC730098	B7Z3J9	87 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315		K7ERU9	68 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	PPP1R17	O96001	155 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	CCL18	P55774	89 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	SPTSSA	Q969W0	71 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	TSC2	P49815	1807 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	NWD2	Q9ULI1	1742 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	ADGRB1	O14514	1584 aa		-0.53	□□□□□ -2.49
ATP6V0A1-210	ENST00000586315	STAB2	Q8WWQ8	2551 aa		-0.53	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	DISP2	A7MBM2	1401 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	DAPK1	P53355	1430 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	STARD9	Q9P2P6	4700 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	SPEF2	Q9C093	1822 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	HECTD4	Q9Y4D8	3996 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	CTXND1	A0A1B0GTU2	59 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315		I3L2K1	104 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315		M0R135	149 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315		M0R2Z0	102 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	SPRR2B	P35325	72 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	CKS1B	P61024	79 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	DCD	P81605	110 aa	Known RBP	-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	TAC4	Q86UU9	113 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	SPANXA1	Q9NS26	97 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	CNOT1	A5YKK6	2376 aa	Known RBP	-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	LPA	P08519	4548 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	MRC1	P22897	1456 aa		-0.54	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	TMEM2	Q9UHN6	1383 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	TEP1	Q99973	2627 aa	Known RBP	-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	TRBV6-1	A0A0K0K1D8	114 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315		J3QR89	54 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	NDUFB6	O95139	128 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	S100A3	P33764	101 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	CCL8	P80075	99 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315		R4GMQ9	66 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	HUWE1	Q7Z6Z7	4374 aa	Known RBP	-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	PI4KA	P42356	2102 aa		-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	PRG4	Q92954	1404 aa	Predicted RBP	-0.55	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	DOCK1	Q14185	1865 aa		-0.56	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	TSPAN19	P0C672	248 aa		-0.56	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	C10orf128	Q5T292	105 aa		-0.56	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	TSTD1	Q8NFU3	115 aa		-0.56	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	URB1	O60287	2271 aa	Known RBP	-0.56	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	PAPPA	Q13219	1627 aa		-0.56	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	ARAP2	Q8WZ64	1704 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	HCG22	E2RYF7	251 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	ARPC5	O15511	151 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	SCGB1A1	P11684	91 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	SPRR1B	P22528	89 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	RBM3	P98179	157 aa	Known RBP	-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	PIGY	Q3MUY2	71 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315		Q6JHZ5	121 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	KCNRG	Q8N5I3	272 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	SMIM4	Q8WVI0	70 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	FXYD6	Q9H0Q3	95 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	GSKIP	Q9P0R6	139 aa		-0.57	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	LRRC37A2	A6NM11	1700 aa		-0.58	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	GOLGA4	Q13439	2230 aa	Known RBP	-0.58	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	TRAV13-2	A0A0B4J235	113 aa		-0.58	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	SIX6	O95475	246 aa		-0.58	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	NCR2	O95944	276 aa		-0.58	□□□□□ -2.5
ATP6V0A1-210	ENST00000586315	B2M	P61769	119 aa		-0.58	□□□□□ -2.5

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms