RNA–Protein interactions for RNA: ENST00000585460.1

PRKAR1A-206, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-206	ENST00000585460	PGLYRP4	Q96LB8	373 aa		10.38	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.37	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	IFNA1	P01562	189 aa		10.37	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	GNG4	P50150	75 aa		10.37	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	RNF185	Q96GF1	192 aa		10.37	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	DPH3P1	Q9H4G8	78 aa		10.37	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	TRBV20OR9-2	A0A075B6H5	130 aa		10.36	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	XKRY2	A2RUG3	117 aa		10.36	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	TRGC1	P0CF51	173 aa		10.36	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	WDR73	Q6P4I2	378 aa		10.36	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	SPACA4	Q8TDM5	124 aa		10.36	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	SMIM12	Q96EX1	92 aa		10.36	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	GAGE12H	A6NDE8	117 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	AMT	P48728	403 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	COTL1	Q14019	142 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	C15orf56	Q8N910	161 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	NUDT10	Q8NFP7	164 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	NUDT11	Q96G61	164 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	MED9	Q9NWA0	146 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	PLAC8	Q9NZF1	115 aa		10.35	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	UBE2L6	O14933	153 aa		10.34	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	SULT1A2	P50226	295 aa		10.34	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	GATD1	Q8NB37	220 aa		10.34	□□□□□ -0.75
PRKAR1A-206	ENST00000585460	PDE6D	O43924	150 aa		10.33	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	MEF2B	Q02080	365 aa	Predicted RBP	10.33	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	COX6A2	Q02221	97 aa		10.33	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	TWIST1	Q15672	202 aa		10.33	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	CFAP161	Q6P656	301 aa		10.33	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	IGKV3OR2-268	A0A0C4DH90	116 aa		10.32	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	CTRL	P40313	264 aa		10.32	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	RPS10	P46783	165 aa	Known RBP	10.32	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	CNFN	Q9BYD5	112 aa		10.32	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	BIN3	Q9NQY0	253 aa		10.32	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	TRAV26-2	A0A0B4J265	109 aa		10.31	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	TEX46	H3BTG2	121 aa		10.31	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	PHOX2A	O14813	284 aa		10.31	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	PRSS3P2	Q8NHM4	247 aa		10.31	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	FOXA3	P55318	350 aa	Predicted RBP	10.3	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	HIGD2B	Q4VC39	106 aa		10.3	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	EIF5AL1	Q6IS14	154 aa	Known RBP	10.3	□□□□□ -0.76
PRKAR1A-206	ENST00000585460		Q6ZNX1	250 aa		10.3	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.3	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	OCC1	Q8TAD7	63 aa		10.29	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	RPL39L	Q96EH5	51 aa	Known RBP	10.29	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	RNASE7	Q9H1E1	156 aa	Known RBP	10.29	□□□□□ -0.76
PRKAR1A-206	ENST00000585460		K7EN84	100 aa		10.28	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	NDUFS6	O75380	124 aa	Known RBP	10.28	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	BCL2	P10415	239 aa		10.28	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	MAJIN	Q3KP22	176 aa		10.28	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	C7orf33	Q8WU49	177 aa		10.28	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	RPP21	Q9H633	154 aa	Known RBP	10.28	□□□□□ -0.76
PRKAR1A-206	ENST00000585460	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.27	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	IGKV2-24	A0A0C4DH68	120 aa		10.27	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.27	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	NCR2	O95944	276 aa		10.27	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	AMMECR1L	Q6DCA0	310 aa		10.27	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	RNASEK	Q6P5S7	137 aa	Known RBP	10.27	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	GTSF1	Q8WW33	167 aa		10.27	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.26	□□□□□ -0.77
PRKAR1A-206	ENST00000585460		H7C423	109 aa		10.26	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	FGF6	P10767	208 aa		10.26	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	FOXI1	Q12951	378 aa		10.26	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	STPG4	Q8N801	248 aa		10.26	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	FAM231B	A6NCW3	169 aa		10.25	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	LYPD6B	Q8NI32	183 aa		10.25	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	LINC01600	Q96MT4	127 aa		10.25	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	SDHAF1	A6NFY7	115 aa		10.24	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	TNXB	P22105	4242 aa		10.23	□□□□□ -0.77
PRKAR1A-206	ENST00000585460		A0A096LNI7	61 aa		10.23	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	APCS	P02743	223 aa		10.23	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	PRR3	P79522	188 aa	Known RBP	10.23	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	TEX261	Q6UWH6	196 aa		10.23	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	SMIM15	Q7Z3B0	74 aa		10.23	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	OR5A1	Q8NGJ0	315 aa		10.23	□□□□□ -0.77
PRKAR1A-206	ENST00000585460		I3L3M4	83 aa		10.22	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	GAS8-AS1	O95177	125 aa		10.22	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	PMCH	P20382	165 aa		10.22	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	TAGLN2	P37802	199 aa	Known RBP	10.22	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	XCL1	P47992	114 aa		10.22	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	ODF1	Q14990	250 aa		10.22	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	LINC00526	Q96FQ7	95 aa		10.22	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	LRP2	P98164	4655 aa		10.21	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	TRBV6-5	A0A0K0K1A5	114 aa		10.21	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	LINC00959	A0A1B0GUT2	108 aa		10.21	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	ESD	P10768	282 aa		10.21	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	SLC51B	Q86UW2	128 aa		10.21	□□□□□ -0.77
PRKAR1A-206	ENST00000585460	RNF213	Q63HN8	5207 aa		10.2	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	CCL25	O15444	150 aa		10.2	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	GATC	O43716	136 aa	Known RBP	10.2	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	ZNF25	P17030	456 aa	Predicted RBP	10.2	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	IGHV1-58	A0A0C4DH39	117 aa		10.19	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	TSHB	P01222	138 aa		10.19	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	KRTAP10-8	P60410	259 aa		10.19	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	TMEM101	Q96IK0	257 aa		10.19	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	BTF3L4	Q96K17	158 aa		10.19	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	LINC00474	Q9P2X8	69 aa		10.19	□□□□□ -0.78
PRKAR1A-206	ENST00000585460		A8MWL6	223 aa		10.18	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.18	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	FAM231D	Q6ZW35	169 aa		10.18	□□□□□ -0.78
PRKAR1A-206	ENST00000585460	TCTE3	Q8IZS6	198 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms