RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 RPS10P46783 165 aaKnown RBP6.38□□□□□ -1.39
UBBP4-201ENST00000583708 TMEM18Q96B42 140 aa6.38□□□□□ -1.39
UBBP4-201ENST00000583708 RPL39LQ96EH5 51 aaKnown RBP6.38□□□□□ -1.39
UBBP4-201ENST00000583708 TMEM243Q9BU79 118 aa6.38□□□□□ -1.39
UBBP4-201ENST00000583708 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
UBBP4-201ENST00000583708 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
UBBP4-201ENST00000583708 A0A087WX48 190 aa6.37□□□□□ -1.39
UBBP4-201ENST00000583708 RAB5AP20339 215 aa6.37□□□□□ -1.39
UBBP4-201ENST00000583708 FCER1GP30273 86 aa6.37□□□□□ -1.39
UBBP4-201ENST00000583708 NIT1Q86X76 327 aa6.37□□□□□ -1.39
UBBP4-201ENST00000583708 Q8N8P6 123 aa6.37□□□□□ -1.39
UBBP4-201ENST00000583708 ALKBH7Q9BT30 221 aaPredicted RBP6.37□□□□□ -1.39
UBBP4-201ENST00000583708 DNAH6Q9C0G6 4158 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 LYSTQ99698 3801 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 NBDYA0A0U1RRE5 68 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 COLCA2A8K830 154 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 SMKR1H3BMG3 65 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 UBE2L6O14933 153 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 ATP6V1G1O75348 118 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 NPYP01303 97 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 ESDP10768 282 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 ZNF25P17030 456 aaPredicted RBP6.36□□□□□ -1.39
UBBP4-201ENST00000583708 AMTP48728 403 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 RAB5BP61020 215 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 LAGE3Q14657 143 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 NTM-AS1Q6ZSK4 140 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 NFE4Q86UQ8 179 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 CBLN2Q8IUK8 224 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 CHCHD5Q9BSY4 110 aa6.36□□□□□ -1.39
UBBP4-201ENST00000583708 CSDC2Q9Y534 153 aaKnown RBP6.36□□□□□ -1.39
UBBP4-201ENST00000583708 TRAV8-3A0A0A6YYJ7 113 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 TMEM262E9PQX1 116 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 GAS8-AS1O95177 125 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 TSHBP01222 138 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 NPSP0C0P6 89 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 ORMDL2Q53FV1 153 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 Q6ZR54 194 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 MRPL52Q86TS9 123 aaKnown RBP6.35□□□□□ -1.39
UBBP4-201ENST00000583708 TIMM21Q9BVV7 248 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
UBBP4-201ENST00000583708 IGLV2-18A0A075B6J9 118 aa6.34□□□□□ -1.39
UBBP4-201ENST00000583708 IBA57-AS1B1ANH7 110 aa6.34□□□□□ -1.39
UBBP4-201ENST00000583708 Q0VG73 95 aa6.34□□□□□ -1.39
UBBP4-201ENST00000583708 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.39
UBBP4-201ENST00000583708 PRSS3P2Q8NHM4 247 aa6.34□□□□□ -1.39
UBBP4-201ENST00000583708 LINC01546A6NGU7 62 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 CCL25O15444 150 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 AMMECR1LQ6DCA0 310 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 RMI2Q96E14 147 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 TMEM101Q96IK0 257 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 TM2D2Q9BX73 214 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 SACSQ9NZJ4 4579 aa6.33□□□□□ -1.4
UBBP4-201ENST00000583708 TRAV8-4A0A0B4J246 113 aa6.32□□□□□ -1.4
UBBP4-201ENST00000583708 RBX1P62877 108 aa6.32□□□□□ -1.4
UBBP4-201ENST00000583708 KIAA1644Q3SXP7 199 aa6.32□□□□□ -1.4
UBBP4-201ENST00000583708 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
UBBP4-201ENST00000583708 DGAT2L7PQ6IED9 249 aa6.32□□□□□ -1.4
UBBP4-201ENST00000583708 SPANXA1Q9NS26 97 aa6.32□□□□□ -1.4
UBBP4-201ENST00000583708 PYGO1Q9Y3Y4 419 aa6.32□□□□□ -1.4
UBBP4-201ENST00000583708 LOC389332A0A1B0GUA5 103 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 LINC00614P0C842 121 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 FGF6P10767 208 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 GAGE6Q13070 117 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 MIAQ16674 131 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 C1orf134Q5TEV5 83 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 LINC00336Q6ZUF6 198 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 FA2HQ7L5A8 372 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 C6orf223Q8N319 242 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 C18orf32Q8TCD1 76 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 PRR34Q9NV39 138 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 CYSLTR1Q9Y271 337 aa6.31□□□□□ -1.4
UBBP4-201ENST00000583708 TRGC2P03986 189 aa6.3□□□□□ -1.4
UBBP4-201ENST00000583708 IFI27P40305 119 aaPredicted RBP6.3□□□□□ -1.4
UBBP4-201ENST00000583708 MRPS36P82909 103 aaKnown RBP6.3□□□□□ -1.4
UBBP4-201ENST00000583708 OR5A1Q8NGJ0 315 aa6.3□□□□□ -1.4
UBBP4-201ENST00000583708 CHCHD1Q96BP2 118 aaKnown RBP6.3□□□□□ -1.4
UBBP4-201ENST00000583708 AP5S1Q9NUS5 200 aa6.3□□□□□ -1.4
UBBP4-201ENST00000583708 IGHV3-30P01768 117 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 IGHV3-33P01772 117 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 CRPP02741 224 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 ANGP03950 147 aaKnown RBP6.29□□□□□ -1.4
UBBP4-201ENST00000583708 IGHV3-30-3P0DP02 117 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 IGHV3-30-5P0DP03 117 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 KMT2AQ03164 3969 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 MPV17L2Q567V2 206 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 RNASEKQ6P5S7 137 aaKnown RBP6.29□□□□□ -1.4
UBBP4-201ENST00000583708 CDC42SE2Q9NRR3 84 aa6.29□□□□□ -1.4
UBBP4-201ENST00000583708 KMT2CQ8NEZ4 4911 aaKnown RBP6.29□□□□□ -1.4
UBBP4-201ENST00000583708 SCO1O75880 301 aa6.28□□□□□ -1.4
UBBP4-201ENST00000583708 ZNF664Q8N3J9 261 aa6.28□□□□□ -1.4
UBBP4-201ENST00000583708 TMEM141Q96I45 108 aa6.28□□□□□ -1.4
UBBP4-201ENST00000583708 TIMM17AQ99595 171 aa6.28□□□□□ -1.4
UBBP4-201ENST00000583708 KLK12Q9UKR0 248 aa6.28□□□□□ -1.4
UBBP4-201ENST00000583708 UBE2D4Q9Y2X8 147 aa6.28□□□□□ -1.4
UBBP4-201ENST00000583708 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.27□□□□□ -1.41
UBBP4-201ENST00000583708 IGKV2-29A2NJV5 120 aaPredicted RBP6.27□□□□□ -1.41
UBBP4-201ENST00000583708 M0R2N4 97 aa6.27□□□□□ -1.41
UBBP4-201ENST00000583708 REG3AQ06141 175 aa6.27□□□□□ -1.41
UBBP4-201ENST00000583708 C2orf66Q6UXQ4 117 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms