RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 ACACBO00763 2458 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 ZZEF1O43149 2961 aa3.3□□□□□ -1.88
PTPRM-215ENST00000583289 IGKV2D-26A0A0A0MRZ7 120 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 A0A1B0GWB2 263 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 ZNF815PA8K554 130 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 A8MZ25 164 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 INSP01308 110 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 LGALS3P17931 250 aaKnown RBP3.29□□□□□ -1.88
PTPRM-215ENST00000583289 DEFB131AP59861 70 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 SPINK13Q1W4C9 94 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 DEFB114Q30KQ6 69 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 C12orf74Q32Q52 190 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 OCIAD2Q56VL3 154 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 FAM74A4Q5TZK3 123 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 UFSP1Q6NVU6 142 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 Q6ZVH6 145 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 C20orf203Q8NBC4 194 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 COPS9Q8WXC6 57 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 RPL39LQ96EH5 51 aaKnown RBP3.29□□□□□ -1.88
PTPRM-215ENST00000583289 PRADC1Q9BSG0 188 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 SPANXB1Q9NS25 103 aaPredicted RBP3.29□□□□□ -1.88
PTPRM-215ENST00000583289 SPANXA1Q9NS26 97 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 ANKRD17O75179 2603 aaKnown RBP3.29□□□□□ -1.88
PTPRM-215ENST00000583289 MYO18BQ8IUG5 2567 aa3.29□□□□□ -1.88
PTPRM-215ENST00000583289 MUC4Q99102 2169 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 TRBV20-1A0A075B6N2 111 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.28□□□□□ -1.88
PTPRM-215ENST00000583289 TRBV10-1A0A0K0K1A3 114 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 LEPROTO15243 131 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 RPL24P83731 157 aaKnown RBP3.28□□□□□ -1.88
PTPRM-215ENST00000583289 TMEM170BQ5T4T1 132 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 Q6ZQT7 251 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 STHQ8IWL8 128 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 MAPKAPK5-AS1Q8N8E1 139 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 SLC25A29Q8N8R3 303 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 KLHL30-AS1Q8NEE0 82 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 RAB37Q96AX2 223 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 LINC01587Q99440 93 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 TIMM21Q9BVV7 248 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 C16orf95Q9H693 158 aa3.28□□□□□ -1.88
PTPRM-215ENST00000583289 NHP2Q9NX24 153 aaKnown RBP3.28□□□□□ -1.88
PTPRM-215ENST00000583289 TSSC4Q9Y5U2 329 aaPredicted RBP3.28□□□□□ -1.88
PTPRM-215ENST00000583289 AGRNO00468 2067 aa3.28□□□□□ -1.89
PTPRM-215ENST00000583289 ITPR1Q14643 2758 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 TRBV7-3A0A075B6L6 115 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 TRAV12-2A0A075B6T6 113 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 IGLL5B9A064 214 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 J3QQQ9 107 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 RS1O15537 224 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 IGHV3-53P01767 116 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 CFC1BP0CG36 223 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 CFC1P0CG37 223 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 FXYD2P54710 66 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 DEFB1P60022 68 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 MRPS36P82909 103 aaKnown RBP3.27□□□□□ -1.89
PTPRM-215ENST00000583289 CIRBPQ14011 172 aaKnown RBP3.27□□□□□ -1.89
PTPRM-215ENST00000583289 COTL1Q14019 142 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 RRN3P1Q2M238 152 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 MORN3Q6PF18 240 aaPredicted RBP3.27□□□□□ -1.89
PTPRM-215ENST00000583289 NEGR1Q7Z3B1 354 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 ZNF418Q8TF45 676 aaPredicted RBP3.27□□□□□ -1.89
PTPRM-215ENST00000583289 NRGNQ92686 78 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 DLX4Q92988 240 aaPredicted RBP3.27□□□□□ -1.89
PTPRM-215ENST00000583289 VPS25Q9BRG1 176 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 YAE1D1Q9NRH1 226 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 IGSF10Q6WRI0 2623 aa3.27□□□□□ -1.89
PTPRM-215ENST00000583289 USP9YO00507 2555 aaPredicted RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 USP9XQ93008 2570 aaPredicted RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 DCHS2Q6V1P9 2916 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 IGLV4-69A0A075B6H9 119 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 A0A0J9YXY3 114 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 A0A0J9YY99 117 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 TINCRA0A1B0GVN0 87 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 TMEM223A0PJW6 202 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 KNCNA6PVL3 124 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 G3V4G9 280 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 H7C423 109 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 CCL24O00175 119 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 TSHBP01222 138 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 RBX1P62877 108 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 DAZ2Q13117 558 aaKnown RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 C10orf99Q6UWK7 81 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 DAZ4Q86SG3 579 aaKnown RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 TMEM61Q8N0U2 210 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 PHLDA1Q8WV24 401 aaPredicted RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 AMELXQ99217 191 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 JPT2Q9H910 190 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 DAZ3Q9NR90 486 aaKnown RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 MRPL16Q9NX20 251 aaKnown RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 CSDC2Q9Y534 153 aaKnown RBP3.26□□□□□ -1.89
PTPRM-215ENST00000583289 CREBBPQ92793 2442 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 CR1P17927 2039 aa3.26□□□□□ -1.89
PTPRM-215ENST00000583289 FAM208BQ5VWN6 2430 aa3.25□□□□□ -1.89
PTPRM-215ENST00000583289 IGLV4-3A0A075B6K6 122 aa3.25□□□□□ -1.89
PTPRM-215ENST00000583289 TIMM17BO60830 172 aa3.25□□□□□ -1.89
PTPRM-215ENST00000583289 NDUFA7O95182 113 aa3.25□□□□□ -1.89
PTPRM-215ENST00000583289 COX6CP09669 75 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms