RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 TSPEAR-AS2P59090 65 aa12.7□□□□□ -0.38
ERBB2-212ENST00000582788 CKS1BP61024 79 aa12.7□□□□□ -0.38
ERBB2-212ENST00000582788 TSPAN13O95857 204 aa12.69□□□□□ -0.38
ERBB2-212ENST00000582788 UBE2D3P61077 147 aa12.69□□□□□ -0.38
ERBB2-212ENST00000582788 UBE2D2P62837 147 aa12.69□□□□□ -0.38
ERBB2-212ENST00000582788 ZNF876PQ49A33 203 aa12.69□□□□□ -0.38
ERBB2-212ENST00000582788 TMEM61Q8N0U2 210 aa12.69□□□□□ -0.38
ERBB2-212ENST00000582788 INSL3P51460 131 aa12.69□□□□□ -0.38
ERBB2-212ENST00000582788 ZNRF2Q8NHG8 242 aa12.69□□□□□ -0.38
ERBB2-212ENST00000582788 PROK1P58294 105 aa12.68□□□□□ -0.38
ERBB2-212ENST00000582788 DEFB114Q30KQ6 69 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 DYNLRB2Q8TF09 96 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 AMELXQ99217 191 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 TRBV20-1A0A075B6N2 111 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 M0QY20 66 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 IGKV3-20P01619 116 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 SMCPP49901 116 aaPredicted RBP12.67□□□□□ -0.38
ERBB2-212ENST00000582788 NSUN5P1Q3KNT7 163 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 CDIP1Q9H305 208 aa12.67□□□□□ -0.38
ERBB2-212ENST00000582788 RHOHQ15669 191 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 FAM74A4Q5TZK3 123 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 SYT8Q8NBV8 401 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 IGHV3-30P01768 117 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 IGHV3-30-5P0DP03 117 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 CRYBA4P53673 196 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 TMEM170BQ5T4T1 132 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 NFE4Q86UQ8 179 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 NDUFA11Q86Y39 141 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 SBSPONQ8IVN8 264 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 PPDPFLQ8WWR9 84 aa12.66□□□□□ -0.38
ERBB2-212ENST00000582788 TRAV12-2A0A075B6T6 113 aa12.65□□□□□ -0.38
ERBB2-212ENST00000582788 TRAV2A0A0B4J234 112 aa12.65□□□□□ -0.38
ERBB2-212ENST00000582788 Q8N1Y9 231 aa12.65□□□□□ -0.38
ERBB2-212ENST00000582788 ZNF256Q9Y2P7 627 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-212ENST00000582788 FN1P02751 2386 aaKnown RBP12.65□□□□□ -0.38
ERBB2-212ENST00000582788 NIPBLQ6KC79 2804 aaeCLIP12.65□□□□□ -0.38
ERBB2-212ENST00000582788 SETD2Q9BYW2 2564 aaPredicted RBP12.65□□□□□ -0.38
ERBB2-212ENST00000582788 ADARB2-AS1A8MUL3 147 aa12.64□□□□□ -0.39
ERBB2-212ENST00000582788 DEFB131AP59861 70 aa12.64□□□□□ -0.39
ERBB2-212ENST00000582788 ZNF56Q15929 161 aa12.64□□□□□ -0.39
ERBB2-212ENST00000582788 TEN1Q86WV5 123 aa12.64□□□□□ -0.39
ERBB2-212ENST00000582788 IGHV1OR15-1A0A075B7D0 117 aa12.64□□□□□ -0.39
ERBB2-212ENST00000582788 SVIPQ8NHG7 77 aa12.64□□□□□ -0.39
ERBB2-212ENST00000582788 J3QQQ9 107 aa12.63□□□□□ -0.39
ERBB2-212ENST00000582788 TRPT1Q86TN4 253 aaKnown RBP12.63□□□□□ -0.39
ERBB2-212ENST00000582788 SORL1Q92673 2214 aa12.63□□□□□ -0.39
ERBB2-212ENST00000582788 LOC107984156A0A0G2JMH3 177 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 CFC1BP0CG36 223 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 CFC1P0CG37 223 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 P0DMU3 169 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 FAM231AP0DMU4 169 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 FAM231CP0DMU5 169 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 PSMB2P49721 201 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 KRTAP10-3P60369 221 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 ARL17AQ8IVW1 177 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 M0QXV9 152 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 SFTA2Q6UW10 78 aa12.62□□□□□ -0.39
ERBB2-212ENST00000582788 SPINK8P0C7L1 97 aa12.61□□□□□ -0.39
ERBB2-212ENST00000582788 OPRPNQ99935 248 aaPredicted RBP12.61□□□□□ -0.39
ERBB2-212ENST00000582788 GEMIN7Q9H840 131 aaKnown RBP12.61□□□□□ -0.39
ERBB2-212ENST00000582788 MAP6D1Q9H9H5 199 aa12.61□□□□□ -0.39
ERBB2-212ENST00000582788 TMEM223A0PJW6 202 aa12.61□□□□□ -0.39
ERBB2-212ENST00000582788 LGALS3P17931 250 aaKnown RBP12.61□□□□□ -0.39
ERBB2-212ENST00000582788 Q6ZUT4 128 aa12.61□□□□□ -0.39
ERBB2-212ENST00000582788 C20orf203Q8NBC4 194 aa12.61□□□□□ -0.39
ERBB2-212ENST00000582788 LEPROTO15243 131 aa12.6□□□□□ -0.39
ERBB2-212ENST00000582788 C10orf126Q8N4M7 172 aa12.59□□□□□ -0.39
ERBB2-212ENST00000582788 C2CD3Q4AC94 2353 aa12.59□□□□□ -0.39
ERBB2-212ENST00000582788 TRAV25A0A0B4J276 109 aa12.59□□□□□ -0.39
ERBB2-212ENST00000582788 A8MWV9 139 aa12.59□□□□□ -0.39
ERBB2-212ENST00000582788 H3BMM0 161 aa12.59□□□□□ -0.39
ERBB2-212ENST00000582788 CRLF1O75462 422 aa12.59□□□□□ -0.39
ERBB2-212ENST00000582788 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.39
ERBB2-212ENST00000582788 A8MTW9 85 aa12.58□□□□□ -0.4
ERBB2-212ENST00000582788 TMEM262E9PQX1 116 aa12.58□□□□□ -0.4
ERBB2-212ENST00000582788 I3L3M4 83 aa12.58□□□□□ -0.4
ERBB2-212ENST00000582788 TCL1BO95988 128 aa12.58□□□□□ -0.4
ERBB2-212ENST00000582788 ZNF22P17026 224 aaPredicted RBP12.58□□□□□ -0.4
ERBB2-212ENST00000582788 CARD19Q96LW7 228 aa12.58□□□□□ -0.4
ERBB2-212ENST00000582788 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
ERBB2-212ENST00000582788 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
ERBB2-212ENST00000582788 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
ERBB2-212ENST00000582788 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
ERBB2-212ENST00000582788 TRGV11A0A075B6L2 103 aa12.57□□□□□ -0.4
ERBB2-212ENST00000582788 PRO1854Q9UHT4 67 aa12.57□□□□□ -0.4
ERBB2-212ENST00000582788 TRAV26-1A0A087WT03 109 aa12.56□□□□□ -0.4
ERBB2-212ENST00000582788 RHODO00212 210 aa12.56□□□□□ -0.4
ERBB2-212ENST00000582788 EIF4EBP3O60516 100 aaPredicted RBP12.55□□□□□ -0.4
ERBB2-212ENST00000582788 MT-ATP8P03928 68 aa12.55□□□□□ -0.4
ERBB2-212ENST00000582788 XGP55808 180 aa12.55□□□□□ -0.4
ERBB2-212ENST00000582788 ODF3L2Q3SX64 289 aa12.55□□□□□ -0.4
ERBB2-212ENST00000582788 CLUHP3Q96NS8 147 aa12.55□□□□□ -0.4
ERBB2-212ENST00000582788 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
ERBB2-212ENST00000582788 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
ERBB2-212ENST00000582788 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
ERBB2-212ENST00000582788 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms