RNA–Protein interactions for RNA: ENST00000582478.5

RFNG-208, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 1 (best)

Gene RFNG, Length 3,107 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-208ENST00000582478 TIRAPP58753 221 aa12.17□□□□□ -0.46
RFNG-208ENST00000582478 PDE6HQ13956 83 aa12.17□□□□□ -0.46
RFNG-208ENST00000582478 CCDC168Q8NDH2 2452 aa12.16□□□□□ -0.46
RFNG-208ENST00000582478 TEX22C9J3V5 150 aa12.16□□□□□ -0.46
RFNG-208ENST00000582478 SLC50A1Q9BRV3 221 aa12.16□□□□□ -0.46
RFNG-208ENST00000582478 SMAD5-AS1Q9Y6J3 95 aa12.15□□□□□ -0.46
RFNG-208ENST00000582478 A0A0J9YXV3 536 aa12.15□□□□□ -0.46
RFNG-208ENST00000582478 HIST1H4AP62805 103 aaKnown RBP12.15□□□□□ -0.46
RFNG-208ENST00000582478 F5H697 171 aa12.15□□□□□ -0.47
RFNG-208ENST00000582478 IGF1P05019 195 aa12.15□□□□□ -0.47
RFNG-208ENST00000582478 PSMG3-AS1Q96PY0 264 aa12.15□□□□□ -0.47
RFNG-208ENST00000582478 DCANP1Q8TF63 244 aa12.14□□□□□ -0.47
RFNG-208ENST00000582478 PTPN13Q12923 2485 aa12.14□□□□□ -0.47
RFNG-208ENST00000582478 UPK3BQ9BT76 320 aa12.14□□□□□ -0.47
RFNG-208ENST00000582478 CREBBPQ92793 2442 aa12.14□□□□□ -0.47
RFNG-208ENST00000582478 IGIPA6NJ69 53 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 PVRIGQ6DKI7 326 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 PHLDA3Q9Y5J5 127 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 LEPROTO15243 131 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 LINC01600Q96MT4 127 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 IGHV3OR16-10A0A075B7F0 116 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 BAALC-AS2P0C853 105 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 LINC01561Q8N1V8 128 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 C16orf92Q96LL3 132 aa12.13□□□□□ -0.47
RFNG-208ENST00000582478 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
RFNG-208ENST00000582478 USP17L23D6RBM5 183 aa12.12□□□□□ -0.47
RFNG-208ENST00000582478 RNF223E7ERA6 249 aa12.12□□□□□ -0.47
RFNG-208ENST00000582478 HOXD3P31249 432 aaPredicted RBP12.12□□□□□ -0.47
RFNG-208ENST00000582478 C1orf195Q5TG92 126 aa12.12□□□□□ -0.47
RFNG-208ENST00000582478 TMEM243Q9BU79 118 aa12.12□□□□□ -0.47
RFNG-208ENST00000582478 FAM223BA6NKX1 122 aa12.12□□□□□ -0.47
RFNG-208ENST00000582478 Q9HAA7 133 aa12.12□□□□□ -0.47
RFNG-208ENST00000582478 CXCL5P42830 114 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 RNASE13Q5GAN3 156 aaKnown RBP12.11□□□□□ -0.47
RFNG-208ENST00000582478 COX8CQ7Z4L0 72 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 C20orf197Q8N268 126 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 SPANXCQ9NY87 97 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 DEFB1P60022 68 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 WFDC9Q8NEX5 89 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 NUP37Q8NFH4 326 aa12.11□□□□□ -0.47
RFNG-208ENST00000582478 C9orf139Q6ZV77 190 aa12.1□□□□□ -0.47
RFNG-208ENST00000582478 C9orf85Q96MD7 179 aa12.1□□□□□ -0.47
RFNG-208ENST00000582478 A0A087WWL8 130 aa12.09□□□□□ -0.47
RFNG-208ENST00000582478 AVPP01185 164 aa12.09□□□□□ -0.47
RFNG-208ENST00000582478 HILS1P60008 231 aa12.09□□□□□ -0.47
RFNG-208ENST00000582478 ADORA2A-AS1P86434 159 aa12.09□□□□□ -0.47
RFNG-208ENST00000582478 PRR9Q5T870 116 aa12.09□□□□□ -0.47
RFNG-208ENST00000582478 PRORYQ9H606 182 aa12.09□□□□□ -0.47
RFNG-208ENST00000582478 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
RFNG-208ENST00000582478 IGHV3-30-3P0DP02 117 aa12.08□□□□□ -0.48
RFNG-208ENST00000582478 A0A1W2PPR1 153 aa12.08□□□□□ -0.48
RFNG-208ENST00000582478 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.48
RFNG-208ENST00000582478 ZNF625Q96I27 306 aaPredicted RBP12.08□□□□□ -0.48
RFNG-208ENST00000582478 BUB1B-PAK6H3BSN5 160 aa12.07□□□□□ -0.48
RFNG-208ENST00000582478 NOTCH2Q04721 2471 aa12.07□□□□□ -0.48
RFNG-208ENST00000582478 SORL1Q92673 2214 aa12.07□□□□□ -0.48
RFNG-208ENST00000582478 TRAV23DV6A0A075B6W5 121 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 GNRH2O43555 120 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 DNAL4O96015 105 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 GPHB5Q86YW7 130 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 C14orf132Q9NPU4 83 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 NDUFA12Q9UI09 145 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 C9orf47Q6ZRZ4 202 aa12.06□□□□□ -0.48
RFNG-208ENST00000582478 LITAFQ99732 161 aa12.05□□□□□ -0.48
RFNG-208ENST00000582478 LY6LH3BQJ8 138 aa12.05□□□□□ -0.48
RFNG-208ENST00000582478 SDHAF1A6NFY7 115 aa12.04□□□□□ -0.48
RFNG-208ENST00000582478 LINC00474Q9P2X8 69 aa12.04□□□□□ -0.48
RFNG-208ENST00000582478 NOTCH3Q9UM47 2321 aa12.04□□□□□ -0.48
RFNG-208ENST00000582478 GNLYP22749 145 aa12.03□□□□□ -0.48
RFNG-208ENST00000582478 Q8N2B8 174 aa12.03□□□□□ -0.48
RFNG-208ENST00000582478 TMEM190Q8WZ59 177 aa12.03□□□□□ -0.48
RFNG-208ENST00000582478 GHRHP01286 108 aa12.03□□□□□ -0.48
RFNG-208ENST00000582478 C9orf129Q5T035 196 aaKnown RBP12.02□□□□□ -0.48
RFNG-208ENST00000582478 TMEM141Q96I45 108 aa12.02□□□□□ -0.48
RFNG-208ENST00000582478 LINC00846Q9NV44 126 aa12.02□□□□□ -0.48
RFNG-208ENST00000582478 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.49
RFNG-208ENST00000582478 NAV2Q8IVL1 2488 aa12.02□□□□□ -0.49
RFNG-208ENST00000582478 MYO9AB2RTY4 2548 aa12.02□□□□□ -0.49
RFNG-208ENST00000582478 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
RFNG-208ENST00000582478 IGHV1-69DA0A0B4J2H0 117 aa12.01□□□□□ -0.49
RFNG-208ENST00000582478 C19orf84I3L1E1 186 aa12.01□□□□□ -0.49
RFNG-208ENST00000582478 CLPSL1A2RUU4 121 aa12.01□□□□□ -0.49
RFNG-208ENST00000582478 SS18Q15532 418 aa12.01□□□□□ -0.49
RFNG-208ENST00000582478 MIAQ16674 131 aa12□□□□□ -0.49
RFNG-208ENST00000582478 FAM218AQ96MZ4 157 aa12□□□□□ -0.49
RFNG-208ENST00000582478 TIMM17AQ99595 171 aa12□□□□□ -0.49
RFNG-208ENST00000582478 USP24Q9UPU5 2620 aa12□□□□□ -0.49
RFNG-208ENST00000582478 IGKV3-7A0A075B6H7 116 aa12□□□□□ -0.49
RFNG-208ENST00000582478 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
RFNG-208ENST00000582478 PRB1P04280 392 aa12□□□□□ -0.49
RFNG-208ENST00000582478 RPL11P62913 178 aaKnown RBP11.99□□□□□ -0.49
RFNG-208ENST00000582478 IGHV4-4A0A075B6R2 117 aa11.99□□□□□ -0.49
RFNG-208ENST00000582478 VCYO14598 125 aa11.99□□□□□ -0.49
RFNG-208ENST00000582478 RNASE4P34096 147 aaKnown RBP11.98□□□□□ -0.49
RFNG-208ENST00000582478 SUMO4Q6EEV6 95 aa11.98□□□□□ -0.49
RFNG-208ENST00000582478 MUC4Q99102 2169 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms