RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	SULT1A2	P50226	295 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	CNBP	P62633	177 aa	Known RBP	7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	NIT2	Q9NQR4	276 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	MED9	Q9NWA0	146 aa		7.41	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114		A0A087WYN8	130 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	TRAV1-1	A0A0B4J248	108 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114		A0A1B0GUV1	79 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	GAGE12H	A6NDE8	117 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	MEF2B	Q02080	365 aa	Predicted RBP	7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	COTL1	Q14019	142 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	TWIST1	Q15672	202 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	HIGD2B	Q4VC39	106 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	WDR73	Q6P4I2	378 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	PGLYRP4	Q96LB8	373 aa		7.4	□□□□□ -1.22
CDK5RAP3-223	ENST00000582114	UBR4	Q5T4S7	5183 aa		7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	TEX46	H3BTG2	121 aa		7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	PDE6D	O43924	150 aa		7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	CIRBP	Q14011	172 aa	Known RBP	7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	GATD1	Q8NB37	220 aa		7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	NUDT10	Q8NFP7	164 aa		7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	NUDT11	Q96G61	164 aa		7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	RNASE7	Q9H1E1	156 aa	Known RBP	7.39	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	IGKV2-29	A2NJV5	120 aa	Predicted RBP	7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	MT1HL1	P0DM35	61 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	BCL2	P10415	239 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	CTRL	P40313	264 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	FOXA3	P55318	350 aa	Predicted RBP	7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114		Q6ZNX1	250 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	C9orf62	Q8N4C0	152 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	C15orf56	Q8N910	161 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	SPACA4	Q8TDM5	124 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	RPL39L	Q96EH5	51 aa	Known RBP	7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	SMIM12	Q96EX1	92 aa		7.38	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	IGKV2-24	A0A0C4DH68	120 aa		7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114		K7EN84	100 aa		7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	PHOX2A	O14813	284 aa		7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	COX6A2	Q02221	97 aa		7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	AMMECR1L	Q6DCA0	310 aa		7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	EIF5AL1	Q6IS14	154 aa	Known RBP	7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	RPP21	Q9H633	154 aa	Known RBP	7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	BIN3	Q9NQY0	253 aa		7.37	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	MAJIN	Q3KP22	176 aa		7.36	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	RNASEK	Q6P5S7	137 aa	Known RBP	7.36	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114		Q6ZRU5	148 aa		7.36	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.36	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	CFAP161	Q6P656	301 aa		7.35	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	PRSS3P2	Q8NHM4	247 aa		7.35	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	OCC1	Q8TAD7	63 aa		7.35	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	RNF185	Q96GF1	192 aa		7.35	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	APCS	P02743	223 aa		7.34	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	RPS10	P46783	165 aa	Known RBP	7.34	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	LYPD6B	Q8NI32	183 aa		7.34	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	C7orf33	Q8WU49	177 aa		7.34	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	GTSF1	Q8WW33	167 aa		7.34	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	CNFN	Q9BYD5	112 aa		7.34	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	PLAC8	Q9NZF1	115 aa		7.34	□□□□□ -1.23
CDK5RAP3-223	ENST00000582114	FGF6	P10767	208 aa		7.33	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	SMIM15	Q7Z3B0	74 aa		7.33	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	STPG4	Q8N801	248 aa		7.33	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	LINC00526	Q96FQ7	95 aa		7.33	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	SDHAF1	A6NFY7	115 aa		7.32	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	NDUFS6	O75380	124 aa	Known RBP	7.32	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	GAS8-AS1	O95177	125 aa		7.32	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	XCL1	P47992	114 aa		7.32	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	CEBPG	P53567	150 aa		7.32	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	FOXI1	Q12951	378 aa		7.32	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	SLC51B	Q86UW2	128 aa		7.32	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114		A0A096LNI7	61 aa		7.31	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.31	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	GATC	O43716	136 aa	Known RBP	7.31	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	NCR2	O95944	276 aa		7.31	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	PMCH	P20382	165 aa		7.31	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	ODF1	Q14990	250 aa		7.31	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	FAM231B	A6NCW3	169 aa		7.3	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	CCL25	O15444	150 aa		7.3	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	TAGLN2	P37802	199 aa	Known RBP	7.3	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	PRR3	P79522	188 aa	Known RBP	7.3	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	TCTE3	Q8IZS6	198 aa		7.3	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	TMEM242	Q9NWH2	141 aa		7.3	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	TNXB	P22105	4242 aa		7.3	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114		H7C423	109 aa		7.29	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114		I3L3M4	83 aa		7.29	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	TSHB	P01222	138 aa		7.29	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	OR5A1	Q8NGJ0	315 aa		7.29	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	TMEM101	Q96IK0	257 aa		7.29	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	BTF3L4	Q96K17	158 aa		7.29	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	LINC00959	A0A1B0GUT2	108 aa		7.28	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114		A8MWL6	223 aa		7.28	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	TEX261	Q6UWH6	196 aa		7.28	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	ALKAL2	Q6UX46	152 aa		7.28	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	ST20	Q9HBF5	79 aa		7.28	□□□□□ -1.24
CDK5RAP3-223	ENST00000582114	ZNF25	P17030	456 aa	Predicted RBP	7.27	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	BORCS7	Q96B45	105 aa		7.27	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	MRAP2	Q96G30	205 aa		7.27	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	CARD19	Q96LW7	228 aa		7.27	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	IGHV1-58	A0A0C4DH39	117 aa		7.26	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	TRBV6-5	A0A0K0K1A5	114 aa		7.26	□□□□□ -1.25
CDK5RAP3-223	ENST00000582114	TMEM250	H0YL14	139 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms