RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 GAGE4Q13068 117 aa8.21□□□□□ -1.1
PSMD3-205ENST00000580980 GAGE5Q13069 117 aa8.21□□□□□ -1.1
PSMD3-205ENST00000580980 GAGE13Q4V321 117 aa8.21□□□□□ -1.1
PSMD3-205ENST00000580980 NRACQ8N912 160 aa8.21□□□□□ -1.1
PSMD3-205ENST00000580980 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
PSMD3-205ENST00000580980 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
PSMD3-205ENST00000580980 TRAPPC1Q9Y5R8 145 aa8.21□□□□□ -1.1
PSMD3-205ENST00000580980 RYR1P21817 5038 aa8.21□□□□□ -1.1
PSMD3-205ENST00000580980 TRBV7-3A0A075B6L6 115 aa8.2□□□□□ -1.1
PSMD3-205ENST00000580980 D6R8Y8 96 aa8.2□□□□□ -1.1
PSMD3-205ENST00000580980 CKS2P33552 79 aa8.2□□□□□ -1.1
PSMD3-205ENST00000580980 RPL32P62910 135 aaKnown RBP8.2□□□□□ -1.1
PSMD3-205ENST00000580980 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
PSMD3-205ENST00000580980 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
PSMD3-205ENST00000580980 RPL36ALQ969Q0 106 aaKnown RBP8.2□□□□□ -1.1
PSMD3-205ENST00000580980 PRSS47A8MTI9 375 aa8.19□□□□□ -1.1
PSMD3-205ENST00000580980 LAGE3Q14657 143 aa8.19□□□□□ -1.1
PSMD3-205ENST00000580980 C20orf78Q9BR46 151 aa8.19□□□□□ -1.1
PSMD3-205ENST00000580980 LRP1BQ9NZR2 4599 aa8.19□□□□□ -1.1
PSMD3-205ENST00000580980 GAS8-AS1O95177 125 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 NCR2O95944 276 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 RPS10P46783 165 aaKnown RBP8.18□□□□□ -1.1
PSMD3-205ENST00000580980 UBE2D3P61077 147 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 UBE2D2P62837 147 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 FABP9Q0Z7S8 132 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 RPL39LQ96EH5 51 aaKnown RBP8.18□□□□□ -1.1
PSMD3-205ENST00000580980 PRELID3AQ96N28 172 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 KRTAP17-1Q9BYP8 105 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 Q9UF83 564 aa8.18□□□□□ -1.1
PSMD3-205ENST00000580980 SMKR1H3BMG3 65 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 PSCAO43653 123 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 NPYP01303 97 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 IGHV3-30P01768 117 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 IGHV3-33P01772 117 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 IGHV3-30-3P0DP02 117 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 IGHV3-30-5P0DP03 117 aa8.17□□□□□ -1.1
PSMD3-205ENST00000580980 SUMO2P61956 95 aaKnown RBP8.17□□□□□ -1.1
PSMD3-205ENST00000580980 DAZ4Q86SG3 579 aaKnown RBP8.17□□□□□ -1.1
PSMD3-205ENST00000580980 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
PSMD3-205ENST00000580980 DAZ3Q9NR90 486 aaKnown RBP8.17□□□□□ -1.1
PSMD3-205ENST00000580980 PCLOQ9Y6V0 5065 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 SDHAF1A6NFY7 115 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 TRGC2P03986 189 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
PSMD3-205ENST00000580980 KIAA1644Q3SXP7 199 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 TMEM70Q9BUB7 260 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 TM2D2Q9BX73 214 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 ST20Q9HBF5 79 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 HSPG2P98160 4391 aa8.16□□□□□ -1.1
PSMD3-205ENST00000580980 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 LRCOL1A6NCL2 159 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 TMEM97Q5BJF2 176 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 MAPKAPK5-AS1Q8N8E1 139 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.15□□□□□ -1.1
PSMD3-205ENST00000580980 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 SMIM2Q9BVW6 85 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 MAP1LC3AQ9H492 121 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 Q9HAA7 133 aa8.15□□□□□ -1.1
PSMD3-205ENST00000580980 K7EMI3 77 aa8.14□□□□□ -1.11
PSMD3-205ENST00000580980 TCAPO15273 167 aa8.14□□□□□ -1.11
PSMD3-205ENST00000580980 NTN5Q8WTR8 489 aaPredicted RBP8.14□□□□□ -1.11
PSMD3-205ENST00000580980 I3L3M4 83 aa8.13□□□□□ -1.11
PSMD3-205ENST00000580980 VCYO14598 125 aa8.13□□□□□ -1.11
PSMD3-205ENST00000580980 NIT1Q86X76 327 aa8.13□□□□□ -1.11
PSMD3-205ENST00000580980 Q8N1X5 172 aa8.13□□□□□ -1.11
PSMD3-205ENST00000580980 NXT2Q9NPJ8 142 aaKnown RBP8.13□□□□□ -1.11
PSMD3-205ENST00000580980 COX11Q9Y6N1 276 aa8.13□□□□□ -1.11
PSMD3-205ENST00000580980 DNAH5Q8TE73 4624 aa8.13□□□□□ -1.11
PSMD3-205ENST00000580980 LINC01546A6NGU7 62 aa8.12□□□□□ -1.11
PSMD3-205ENST00000580980 PMCHP20382 165 aa8.12□□□□□ -1.11
PSMD3-205ENST00000580980 Q8N3U1 123 aa8.12□□□□□ -1.11
PSMD3-205ENST00000580980 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
PSMD3-205ENST00000580980 KIR2DL4Q99706 377 aa8.12□□□□□ -1.11
PSMD3-205ENST00000580980 APOBP04114 4563 aaKnown RBP8.11□□□□□ -1.11
PSMD3-205ENST00000580980 A0A087WX48 190 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 GCSHP23434 173 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 FUSP35637 526 aaKnown RBP eCLIP8.11□□□□□ -1.11
PSMD3-205ENST00000580980 Q0VG73 95 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 COTL1Q14019 142 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 IQCJQ1A5X6 159 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 Q8N814 137 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 Q8N8P6 123 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 RMI2Q96E14 147 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 KRTAP4-5Q9BYR2 181 aa8.11□□□□□ -1.11
PSMD3-205ENST00000580980 IGLV5-52A0A0A0MRZ9 124 aa8.1□□□□□ -1.11
PSMD3-205ENST00000580980 TRBV6-8A0A0A6YYG3 113 aa8.1□□□□□ -1.11
PSMD3-205ENST00000580980 TSHBP01222 138 aa8.1□□□□□ -1.11
PSMD3-205ENST00000580980 PKIAP61925 76 aa8.1□□□□□ -1.11
PSMD3-205ENST00000580980 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
PSMD3-205ENST00000580980 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
PSMD3-205ENST00000580980 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
PSMD3-205ENST00000580980 IGHV1-24A0A0C4DH33 117 aa8.08□□□□□ -1.12
PSMD3-205ENST00000580980 C1orf196B1AJZ1 125 aa8.08□□□□□ -1.12
PSMD3-205ENST00000580980 HIST1H2BKO60814 126 aa8.08□□□□□ -1.12
PSMD3-205ENST00000580980 HIST1H2BJP06899 126 aa8.08□□□□□ -1.12
PSMD3-205ENST00000580980 ESDP10768 282 aa8.08□□□□□ -1.12
PSMD3-205ENST00000580980 HIST1H2BOP23527 126 aa8.08□□□□□ -1.12
PSMD3-205ENST00000580980 HIST1H2BBP33778 126 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms