RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
PTPRM-212ENST00000580838 COL6A3P12111 3177 aa4.25□□□□□ -1.73
PTPRM-212ENST00000580838 ABCA4P78363 2273 aa4.25□□□□□ -1.73
PTPRM-212ENST00000580838 PTPRQQ9UMZ3 2332 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 IGKV3-7A0A075B6H7 116 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 IGHV1-58A0A0C4DH39 117 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 IGHV4-61A0A0C4DH41 118 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 TRBV10-2A0A0K0K1G8 114 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 A0A1W2PPR1 153 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 C9JAW5 83 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 SNCGO76070 127 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 IGHV4-38-2P0DP08 117 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 SRD5A1P18405 259 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 ATP5J2P56134 94 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 TSPEAR-AS2P59090 65 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 MRPS36P82909 103 aaKnown RBP4.24□□□□□ -1.73
PTPRM-212ENST00000580838 LINC01620Q4KN68 170 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 PPDPFQ9H3Y8 114 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 AGRNO00468 2067 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 CACNA1BQ00975 2339 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 ADGRG4Q8IZF6 3080 aa4.24□□□□□ -1.73
PTPRM-212ENST00000580838 ARHGAP32A7KAX9 2087 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 LOC400499M0QZD8 3231 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 IGHV3OR16-10A0A075B7F0 116 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 TRAV8-4A0A0B4J246 113 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 FAM240AA0A1B0GVK7 77 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 A8MTW9 85 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 H3BMM0 161 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 INSL3P51460 131 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 EMP1P54849 157 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 GAGE2BQ13066 116 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 MIAQ16674 131 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 GAGE2EQ4V326 116 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 MUSTN1Q8IVN3 82 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 UBE2WQ96B02 151 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 CARD19Q96LW7 228 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 ANAPC13Q9BS18 74 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 PEMTQ9UBM1 199 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 GAGE2DQ9UEU5 116 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 NDUFA12Q9UI09 145 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 DMXL1Q9Y485 3027 aa4.23□□□□□ -1.73
PTPRM-212ENST00000580838 A0A0J9YXV3 536 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 ACYP1P07311 99 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 TIRAPP58753 221 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 DEFB1P60022 68 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 BLCAPP62952 87 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 SPINK13Q1W4C9 94 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 VSIG2Q96IQ7 327 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 UBE2E2Q96LR5 201 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 PRORYQ9H606 182 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 JPT2Q9H910 190 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 ICOSQ9Y6W8 199 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 CFAP47Q6ZTR5 3102 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 LRBAP50851 2863 aa4.22□□□□□ -1.73
PTPRM-212ENST00000580838 HRNRQ86YZ3 2850 aaPredicted RBP4.22□□□□□ -1.73
PTPRM-212ENST00000580838 IGKV2D-30A0A075B6S6 120 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 NDUFA1O15239 70 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 SPRY2O43597 315 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 INSP01308 110 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 PRSS2P07478 247 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 XGP55808 180 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 HERVK_113P63121 156 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 TTC32Q5I0X7 151 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 DGAT2L7PQ6IED9 249 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 SFTA2Q6UW10 78 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 C2orf82Q6UX34 121 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 DUX3Q96PT4 197 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 CITED1Q99966 193 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 VPREB3Q9UKI3 123 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 MUC6Q6W4X9 2439 aa4.21□□□□□ -1.74
PTPRM-212ENST00000580838 DMXL2Q8TDJ6 3036 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 TRAV12-2A0A075B6T6 113 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 IGLV5-45A0A087WSX0 123 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 IGHV4-30-2A0A087WSY4 118 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 H7C2G1 150 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 IGHV3-53P01767 116 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 HOXD3P31249 432 aaPredicted RBP4.2□□□□□ -1.74
PTPRM-212ENST00000580838 CMC4P56277 68 aaPredicted RBP4.2□□□□□ -1.74
PTPRM-212ENST00000580838 SYNJ2BPP57105 145 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 HERV-K104P63124 156 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE5Q13069 117 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 GAGE6Q13070 117 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 TMEM61Q8N0U2 210 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 OVOL2Q9BRP0 275 aa4.2□□□□□ -1.74
PTPRM-212ENST00000580838 MUC4Q99102 2169 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 TRAV26-1A0A087WT03 109 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 TRAV25A0A0B4J276 109 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 TRBV10-1A0A0K0K1A3 114 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 C19orf84I3L1E1 186 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 LST1O00453 97 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 RS1O15537 224 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 DEFB112Q30KQ8 113 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 DEFB121Q5J5C9 76 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 FAM19A3Q7Z5A8 133 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 DYNLRB2Q8TF09 96 aa4.19□□□□□ -1.74
PTPRM-212ENST00000580838 LITAFQ99732 161 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms