RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 CCL20P78556 96 aa6.73□□□□□ -1.33
CSNK1D-210ENST00000579308 ZNF345Q14585 488 aa6.73□□□□□ -1.33
CSNK1D-210ENST00000579308 FER1L6-AS1Q8NA97 138 aa6.73□□□□□ -1.33
CSNK1D-210ENST00000579308 C11orf52Q96A22 123 aa6.73□□□□□ -1.33
CSNK1D-210ENST00000579308 PGLYRP4Q96LB8 373 aa6.73□□□□□ -1.33
CSNK1D-210ENST00000579308 TMEM243Q9BU79 118 aa6.73□□□□□ -1.33
CSNK1D-210ENST00000579308 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 MGPP08493 103 aa6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 RAB5CP51148 216 aa6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 CACNG7P62955 275 aa6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 DPH3Q96FX2 82 aa6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 TPPP3Q9BW30 176 aa6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 AP5S1Q9NUS5 200 aa6.72□□□□□ -1.33
CSNK1D-210ENST00000579308 TRAV1-1A0A0B4J248 108 aa6.71□□□□□ -1.34
CSNK1D-210ENST00000579308 HMSDA8MTL9 139 aa6.71□□□□□ -1.34
CSNK1D-210ENST00000579308 F2Z2F3 143 aa6.71□□□□□ -1.34
CSNK1D-210ENST00000579308 CENPWQ5EE01 88 aa6.71□□□□□ -1.34
CSNK1D-210ENST00000579308 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
CSNK1D-210ENST00000579308 OR2D3Q8NGH3 330 aa6.71□□□□□ -1.34
CSNK1D-210ENST00000579308 NIT2Q9NQR4 276 aa6.71□□□□□ -1.34
CSNK1D-210ENST00000579308 PHOX2AO14813 284 aa6.7□□□□□ -1.34
CSNK1D-210ENST00000579308 NDUFA5Q16718 116 aa6.7□□□□□ -1.34
CSNK1D-210ENST00000579308 WDR73Q6P4I2 378 aa6.7□□□□□ -1.34
CSNK1D-210ENST00000579308 C9orf62Q8N4C0 152 aa6.7□□□□□ -1.34
CSNK1D-210ENST00000579308 RAB19A4D1S5 217 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 BCL2L11O43521 198 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 NTF3P20783 257 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 RPS10P46783 165 aaKnown RBP6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 COX6A2Q02221 97 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 CFAP161Q6P656 301 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 LYZL1Q6UWQ5 148 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 SMIM12Q96EX1 92 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 LINC01600Q96MT4 127 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 DPH3P1Q9H4G8 78 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 MANBALQ9NQG1 85 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 GNG13Q9P2W3 67 aa6.69□□□□□ -1.34
CSNK1D-210ENST00000579308 TRBV20OR9-2A0A075B6H5 130 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 IFNA1P01562 189 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 TRGC1P0CF51 173 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 S100A1P23297 94 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 AMTP48728 403 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 COTL1Q14019 142 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 GATD1Q8NB37 220 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 PRSS3P2Q8NHM4 247 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
CSNK1D-210ENST00000579308 KANTRA0A1W2PQU2 76 aa6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 XKRY2A2RUG3 117 aa6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 UBE2L6O14933 153 aa6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 NDUFS6O75380 124 aaKnown RBP6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 CTRLP40313 264 aa6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 GNG4P50150 75 aa6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 SULT1A2P50226 295 aa6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 PRR3P79522 188 aaKnown RBP6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
CSNK1D-210ENST00000579308 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
CSNK1D-210ENST00000579308 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
CSNK1D-210ENST00000579308 EIF5AP63241 154 aaKnown RBP6.66□□□□□ -1.34
CSNK1D-210ENST00000579308 MAJINQ3KP22 176 aa6.66□□□□□ -1.34
CSNK1D-210ENST00000579308 NUDT10Q8NFP7 164 aa6.66□□□□□ -1.34
CSNK1D-210ENST00000579308 CHCHD10Q8WYQ3 142 aaPredicted RBP6.66□□□□□ -1.34
CSNK1D-210ENST00000579308 NUDT11Q96G61 164 aa6.66□□□□□ -1.34
CSNK1D-210ENST00000579308 H7C423 109 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 PDE6DO43924 150 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 MEF2BQ02080 365 aaPredicted RBP6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 FOXI1Q12951 378 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 ODF1Q14990 250 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 TWIST1Q15672 202 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 STPG4Q8N801 248 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 GTSF1Q8WW33 167 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 BIN3Q9NQY0 253 aa6.65□□□□□ -1.34
CSNK1D-210ENST00000579308 TRAV26-2A0A0B4J265 109 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 IGKV2-24A0A0C4DH68 120 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 IGKV3OR2-268A0A0C4DH90 116 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 A0A0J9YXV3 536 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 NCR2O95944 276 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 FOXA3P55318 350 aaPredicted RBP6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 SRSF9Q13242 221 aaKnown RBP eCLIP6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 AKAP14Q86UN6 197 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 MED9Q9NWA0 146 aa6.64□□□□□ -1.35
CSNK1D-210ENST00000579308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.63□□□□□ -1.35
CSNK1D-210ENST00000579308 A0A096LNI7 61 aa6.63□□□□□ -1.35
CSNK1D-210ENST00000579308 IGKV2-29A2NJV5 120 aaPredicted RBP6.63□□□□□ -1.35
CSNK1D-210ENST00000579308 FAM231BA6NCW3 169 aa6.63□□□□□ -1.35
CSNK1D-210ENST00000579308 FGF6P10767 208 aa6.63□□□□□ -1.35
CSNK1D-210ENST00000579308 LYPD6BQ8NI32 183 aa6.63□□□□□ -1.35
CSNK1D-210ENST00000579308 RPL39LQ96EH5 51 aaKnown RBP6.63□□□□□ -1.35
CSNK1D-210ENST00000579308 K7EN84 100 aa6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 BCL2P10415 239 aa6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 AMMECR1LQ6DCA0 310 aa6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 SPINK6Q6UWN8 80 aa6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 OR5A1Q8NGJ0 315 aa6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 RNASE7Q9H1E1 156 aaKnown RBP6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 RPP21Q9H633 154 aaKnown RBP6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 LINC00474Q9P2X8 69 aa6.62□□□□□ -1.35
CSNK1D-210ENST00000579308 SDHAF1A6NFY7 115 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms