RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 SEC11CQ9BY50 192 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 DPH3P1Q9H4G8 78 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 PRR34Q9NV39 138 aa5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 CARHSP1Q9Y2V2 147 aaKnown RBP5.97□□□□□ -1.45
CDK5RAP3-211ENST00000578996 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 F2Z2F3 143 aa5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 BCL2P10415 239 aa5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 NTF3P20783 257 aa5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 RPL37AP61513 92 aaKnown RBP5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 TWIST1Q15672 202 aa5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 BIN3Q9NQY0 253 aa5.96□□□□□ -1.46
CDK5RAP3-211ENST00000578996 TRBV20OR9-2A0A075B6H5 130 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 IGLV4-60A0A075B6I1 120 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 IGKV3OR2-268A0A0C4DH90 116 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 hDV102S1A0JD36 115 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 AMTP48728 403 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 DGAT2L7PQ6IED9 249 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 NUDT10Q8NFP7 164 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 NUDT11Q96G61 164 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 NIT2Q9NQR4 276 aa5.95□□□□□ -1.46
CDK5RAP3-211ENST00000578996 TRAV26-2A0A0B4J265 109 aa5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 COTL1Q14019 142 aa5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 WDR73Q6P4I2 378 aa5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 KRTAP26-1Q6PEX3 210 aa5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 C9orf163Q8N9P6 203 aa5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 RNASE7Q9H1E1 156 aaKnown RBP5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 RPP21Q9H633 154 aaKnown RBP5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
CDK5RAP3-211ENST00000578996 TRAV8-4A0A0B4J246 113 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 CTRLP40313 264 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 SRSF3P84103 164 aaKnown RBP5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 SVBPQ8N300 66 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 CLRN3Q8NCR9 226 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 DPH3Q96FX2 82 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 PGLYRP4Q96LB8 373 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 EIF5A2Q9GZV4 153 aaKnown RBP5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 GFRA4Q9GZZ7 299 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
CDK5RAP3-211ENST00000578996 A0A1B0GUV1 79 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 F8W036 122 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 TMEM250H0YL14 139 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 PANO1I0J062 215 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 K7EN84 100 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 ADCYAP1P18509 176 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 CEBPGP53567 150 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 AMMECR1LQ6DCA0 310 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 SMIM15Q7Z3B0 74 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 GATD1Q8NB37 220 aa5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 LRP1Q07954 4544 aaKnown RBP5.92□□□□□ -1.46
CDK5RAP3-211ENST00000578996 IGHV3-64A0A075B6Q5 118 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 GAGE12HA6NDE8 117 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 C9JQL5 133 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 SNAPINO95295 136 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 OXTP01178 125 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 APOC3P02656 99 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 SRP19P09132 144 aaKnown RBP5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 RNASEKQ6P5S7 137 aaKnown RBP5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 SDIM1Q6ZPB5 146 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 OCC1Q8TAD7 63 aa5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 RPL39LQ96EH5 51 aaKnown RBP5.91□□□□□ -1.46
CDK5RAP3-211ENST00000578996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 IGKV2-29A2NJV5 120 aaPredicted RBP5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 GATCO43716 136 aaKnown RBP5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 APCSP02743 223 aa5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 CHTF8P0CG12 524 aa5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 HNRNPA3P51991 378 aaKnown RBP5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 FOXA3P55318 350 aaPredicted RBP5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 CNBPP62633 177 aaKnown RBP5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 HIGD2BQ4VC39 106 aa5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 FAM74A3Q4VXF1 159 aa5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 GTSF1Q8WW33 167 aa5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 CNFNQ9BYD5 112 aa5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.46
CDK5RAP3-211ENST00000578996 PNRC1Q12796 327 aaPredicted RBP5.89□□□□□ -1.47
CDK5RAP3-211ENST00000578996 SERTAD4-AS1Q5TG53 156 aa5.89□□□□□ -1.47
CDK5RAP3-211ENST00000578996 BORCS7Q96B45 105 aa5.89□□□□□ -1.47
CDK5RAP3-211ENST00000578996 SDHAF1A6NFY7 115 aa5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 NCR2O95944 276 aa5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 SLPIP03973 132 aa5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 PMCHP20382 165 aa5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 RHEBQ15382 184 aa5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 CFAP161Q6P656 301 aa5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 C15orf56Q8N910 161 aa5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 CHCHD10Q8WYQ3 142 aaPredicted RBP5.88□□□□□ -1.47
CDK5RAP3-211ENST00000578996 A0A087WYN8 130 aa5.87□□□□□ -1.47
CDK5RAP3-211ENST00000578996 A8MWL6 223 aa5.87□□□□□ -1.47
CDK5RAP3-211ENST00000578996 FGF6P10767 208 aa5.87□□□□□ -1.47
CDK5RAP3-211ENST00000578996 TMEM101Q96IK0 257 aa5.87□□□□□ -1.47
CDK5RAP3-211ENST00000578996 BTF3L4Q96K17 158 aa5.87□□□□□ -1.47
CDK5RAP3-211ENST00000578996 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
CDK5RAP3-211ENST00000578996 IGKV2-24A0A0C4DH68 120 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 I3L3M4 83 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 RPS10P46783 165 aaKnown RBP5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 XCL1P47992 114 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 COX6A2Q02221 97 aa5.86□□□□□ -1.47
CDK5RAP3-211ENST00000578996 MAJINQ3KP22 176 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 851.1 ms