RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 NUDT10Q8NFP7 164 aa5.68□□□□□ -1.5
GGA3-207ENST00000578896 NUDT11Q96G61 164 aa5.68□□□□□ -1.5
GGA3-207ENST00000578896 DPH3P1Q9H4G8 78 aa5.68□□□□□ -1.5
GGA3-207ENST00000578896 NIT2Q9NQR4 276 aa5.68□□□□□ -1.5
GGA3-207ENST00000578896 IGHV3-64A0A075B6Q5 118 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 TRAV8-4A0A0B4J246 113 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 TRAV1-1A0A0B4J248 108 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 A0A1B0GUV1 79 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 UBE2L6O14933 153 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 TRGC1P0CF51 173 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 AMTP48728 403 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 SULT1A2P50226 295 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 CNBPP62633 177 aaKnown RBP5.67□□□□□ -1.5
GGA3-207ENST00000578896 COTL1Q14019 142 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 TWIST1Q15672 202 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 GATD1Q8NB37 220 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 RPL39LQ96EH5 51 aaKnown RBP5.67□□□□□ -1.5
GGA3-207ENST00000578896 RNASE7Q9H1E1 156 aaKnown RBP5.67□□□□□ -1.5
GGA3-207ENST00000578896 AP5S1Q9NUS5 200 aa5.67□□□□□ -1.5
GGA3-207ENST00000578896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.66□□□□□ -1.5
GGA3-207ENST00000578896 IGKV2-29A2NJV5 120 aaPredicted RBP5.66□□□□□ -1.5
GGA3-207ENST00000578896 F2Z2F3 143 aa5.66□□□□□ -1.5
GGA3-207ENST00000578896 MEF2BQ02080 365 aaPredicted RBP5.66□□□□□ -1.5
GGA3-207ENST00000578896 COX6A2Q02221 97 aa5.66□□□□□ -1.5
GGA3-207ENST00000578896 CIRBPQ14011 172 aaKnown RBP5.66□□□□□ -1.5
GGA3-207ENST00000578896 ODF1Q14990 250 aa5.66□□□□□ -1.5
GGA3-207ENST00000578896 Q6ZNX1 250 aa5.66□□□□□ -1.5
GGA3-207ENST00000578896 C15orf56Q8N910 161 aa5.66□□□□□ -1.5
GGA3-207ENST00000578896 IGKV2-24A0A0C4DH68 120 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 XKRY2A2RUG3 117 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 K7EN84 100 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 PHOX2AO14813 284 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 BCL2P10415 239 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 RNASEKQ6P5S7 137 aaKnown RBP5.65□□□□□ -1.5
GGA3-207ENST00000578896 C9orf62Q8N4C0 152 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 OCC1Q8TAD7 63 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 SPACA4Q8TDM5 124 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 PGLYRP4Q96LB8 373 aa5.65□□□□□ -1.5
GGA3-207ENST00000578896 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.64□□□□□ -1.51
GGA3-207ENST00000578896 TEX46H3BTG2 121 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 PDE6DO43924 150 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 GAS8-AS1O95177 125 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 CTRLP40313 264 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 MAJINQ3KP22 176 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 WDR73Q6P4I2 378 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 LYPD6BQ8NI32 183 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 GTSF1Q8WW33 167 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 CHCHD10Q8WYQ3 142 aaPredicted RBP5.64□□□□□ -1.51
GGA3-207ENST00000578896 LINC00526Q96FQ7 95 aa5.64□□□□□ -1.51
GGA3-207ENST00000578896 RPP21Q9H633 154 aaKnown RBP5.64□□□□□ -1.51
GGA3-207ENST00000578896 RPS10P46783 165 aaKnown RBP5.63□□□□□ -1.51
GGA3-207ENST00000578896 AMMECR1LQ6DCA0 310 aa5.63□□□□□ -1.51
GGA3-207ENST00000578896 SMIM12Q96EX1 92 aa5.63□□□□□ -1.51
GGA3-207ENST00000578896 PLAC8Q9NZF1 115 aa5.63□□□□□ -1.51
GGA3-207ENST00000578896 FGF6P10767 208 aa5.62□□□□□ -1.51
GGA3-207ENST00000578896 EIF5AL1Q6IS14 154 aaKnown RBP5.62□□□□□ -1.51
GGA3-207ENST00000578896 CFAP161Q6P656 301 aa5.62□□□□□ -1.51
GGA3-207ENST00000578896 Q6ZRU5 148 aa5.62□□□□□ -1.51
GGA3-207ENST00000578896 CNFNQ9BYD5 112 aa5.62□□□□□ -1.51
GGA3-207ENST00000578896 BIN3Q9NQY0 253 aa5.62□□□□□ -1.51
GGA3-207ENST00000578896 A0A096LNI7 61 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 FAM231BA6NCW3 169 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 SDHAF1A6NFY7 115 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 GATCO43716 136 aaKnown RBP5.61□□□□□ -1.51
GGA3-207ENST00000578896 NDUFS6O75380 124 aaKnown RBP5.61□□□□□ -1.51
GGA3-207ENST00000578896 APCSP02743 223 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 PMCHP20382 165 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 XCL1P47992 114 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 CEBPGP53567 150 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 FOXI1Q12951 378 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 SLC51BQ86UW2 128 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 STPG4Q8N801 248 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 RNF185Q96GF1 192 aa5.61□□□□□ -1.51
GGA3-207ENST00000578896 C7orf33Q8WU49 177 aa5.6□□□□□ -1.51
GGA3-207ENST00000578896 TMEM242Q9NWH2 141 aa5.6□□□□□ -1.51
GGA3-207ENST00000578896 GVQW2A0A096LPI5 108 aaPredicted RBP5.59□□□□□ -1.51
GGA3-207ENST00000578896 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
GGA3-207ENST00000578896 CCL25O15444 150 aa5.59□□□□□ -1.51
GGA3-207ENST00000578896 NCR2O95944 276 aa5.59□□□□□ -1.51
GGA3-207ENST00000578896 TSHBP01222 138 aa5.59□□□□□ -1.51
GGA3-207ENST00000578896 SMIM15Q7Z3B0 74 aa5.59□□□□□ -1.51
GGA3-207ENST00000578896 TCTE3Q8IZS6 198 aa5.59□□□□□ -1.51
GGA3-207ENST00000578896 SMKR1H3BMG3 65 aa5.58□□□□□ -1.52
GGA3-207ENST00000578896 I3L3M4 83 aa5.58□□□□□ -1.52
GGA3-207ENST00000578896 PRR3P79522 188 aaKnown RBP5.58□□□□□ -1.52
GGA3-207ENST00000578896 ALKAL2Q6UX46 152 aa5.58□□□□□ -1.52
GGA3-207ENST00000578896 OR5A1Q8NGJ0 315 aa5.58□□□□□ -1.52
GGA3-207ENST00000578896 TMEM101Q96IK0 257 aa5.58□□□□□ -1.52
GGA3-207ENST00000578896 BTF3L4Q96K17 158 aa5.58□□□□□ -1.52
GGA3-207ENST00000578896 A8MWL6 223 aa5.57□□□□□ -1.52
GGA3-207ENST00000578896 H7C423 109 aa5.57□□□□□ -1.52
GGA3-207ENST00000578896 ESDP10768 282 aa5.57□□□□□ -1.52
GGA3-207ENST00000578896 RNASE13Q5GAN3 156 aaKnown RBP5.57□□□□□ -1.52
GGA3-207ENST00000578896 ST20Q9HBF5 79 aa5.57□□□□□ -1.52
GGA3-207ENST00000578896 IGHV1-58A0A0C4DH39 117 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 TRBV6-5A0A0K0K1A5 114 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 RAB4AP20338 218 aa5.56□□□□□ -1.52
GGA3-207ENST00000578896 TAGLN2P37802 199 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms