RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 ST20Q9HBF5 79 aa10.22□□□□□ -0.77
SLC6A4-204ENST00000578609 DNAH11Q96DT5 4516 aa10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 TMEM262E9PQX1 116 aa10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 AMTP48728 403 aa10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 POLR2KP53803 58 aaKnown RBP10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 GAGE6Q13070 117 aa10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 ATRAIDQ6UW56 229 aa10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 BTF3L4Q96K17 158 aa10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 KLK12Q9UKR0 248 aa10.21□□□□□ -0.77
SLC6A4-204ENST00000578609 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
SLC6A4-204ENST00000578609 I3L3M4 83 aa10.2□□□□□ -0.78
SLC6A4-204ENST00000578609 RBX1P62877 108 aa10.2□□□□□ -0.78
SLC6A4-204ENST00000578609 Q8N976 141 aa10.2□□□□□ -0.78
SLC6A4-204ENST00000578609 TMEM242Q9NWH2 141 aa10.2□□□□□ -0.78
SLC6A4-204ENST00000578609 PKHD1P08F94 4074 aa10.19□□□□□ -0.78
SLC6A4-204ENST00000578609 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
SLC6A4-204ENST00000578609 APCSP02743 223 aa10.19□□□□□ -0.78
SLC6A4-204ENST00000578609 SUMO2P61956 95 aaKnown RBP10.19□□□□□ -0.78
SLC6A4-204ENST00000578609 RHEBQ15382 184 aa10.19□□□□□ -0.78
SLC6A4-204ENST00000578609 DEFB104AQ8WTQ1 72 aa10.19□□□□□ -0.78
SLC6A4-204ENST00000578609 TRAV9-1A0A075B6T8 112 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 A0A087WTM6 91 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 A0A1B0GUV1 79 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 C7orf77A4D0Y5 90 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 TSHBP01222 138 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 PPBPP02775 128 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 PMCHP20382 165 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 CKS2P33552 79 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 CLRN3Q8NCR9 226 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 UBE2WQ96B02 151 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 PRR34Q9NV39 138 aa10.18□□□□□ -0.78
SLC6A4-204ENST00000578609 D6R8Y8 96 aa10.17□□□□□ -0.78
SLC6A4-204ENST00000578609 ANGP03950 147 aaKnown RBP10.17□□□□□ -0.78
SLC6A4-204ENST00000578609 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
SLC6A4-204ENST00000578609 Q0VG73 95 aa10.17□□□□□ -0.78
SLC6A4-204ENST00000578609 ENHOQ6UWT2 76 aa10.17□□□□□ -0.78
SLC6A4-204ENST00000578609 LRCOL1A6NCL2 159 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 H7C423 109 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 VCYO14598 125 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 PHOX2AO14813 284 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 UBE2L6O14933 153 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 PSCAO43653 123 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 TNFRSF6BO95407 300 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 CRPP02741 224 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 ESDP10768 282 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 C20orf203Q8NBC4 194 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 RMI2Q96E14 147 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 COX11Q9Y6N1 276 aa10.16□□□□□ -0.78
SLC6A4-204ENST00000578609 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.78
SLC6A4-204ENST00000578609 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
SLC6A4-204ENST00000578609 DYNC1H1Q14204 4646 aaKnown RBP10.15□□□□□ -0.78
SLC6A4-204ENST00000578609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 IGKV2-29A2NJV5 120 aaPredicted RBP10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 EREGO14944 169 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 NPYP01303 97 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 S100PP25815 95 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 KRTAP10-2P60368 255 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 MIAQ16674 131 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 NDUFA5Q16718 116 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 SPATA12Q7Z6I5 190 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 LINC00269Q8N2A0 174 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 RPS10P5Q9NQ39 176 aa10.14□□□□□ -0.79
SLC6A4-204ENST00000578609 IGKV2D-24A0A075B6R9 120 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 APOC3P02656 99 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 TMEM136Q6ZRR5 245 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 SVBPQ8N300 66 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 MAPKAPK5-AS1Q8N8E1 139 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 KIR2DL4Q99706 377 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 C1orf43Q9BWL3 253 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 LAMTOR2Q9Y2Q5 125 aa10.13□□□□□ -0.79
SLC6A4-204ENST00000578609 SNAPINO95295 136 aa10.12□□□□□ -0.79
SLC6A4-204ENST00000578609 FGF6P10767 208 aa10.12□□□□□ -0.79
SLC6A4-204ENST00000578609 ZNF25P17030 456 aaPredicted RBP10.12□□□□□ -0.79
SLC6A4-204ENST00000578609 FCER1GP30273 86 aa10.12□□□□□ -0.79
SLC6A4-204ENST00000578609 REG3AQ06141 175 aa10.12□□□□□ -0.79
SLC6A4-204ENST00000578609 CLPSL2Q6UWE3 100 aa10.12□□□□□ -0.79
SLC6A4-204ENST00000578609 PRELID3AQ96N28 172 aa10.12□□□□□ -0.79
SLC6A4-204ENST00000578609 TCAPO15273 167 aa10.11□□□□□ -0.79
SLC6A4-204ENST00000578609 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
SLC6A4-204ENST00000578609 CDPF1Q6NVV7 123 aa10.11□□□□□ -0.79
SLC6A4-204ENST00000578609 MRPL52Q86TS9 123 aaKnown RBP10.11□□□□□ -0.79
SLC6A4-204ENST00000578609 C16orf90A8MZG2 172 aa10.1□□□□□ -0.79
SLC6A4-204ENST00000578609 WFDC2Q14508 124 aa10.1□□□□□ -0.79
SLC6A4-204ENST00000578609 Q8N814 137 aa10.1□□□□□ -0.79
SLC6A4-204ENST00000578609 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
SLC6A4-204ENST00000578609 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
SLC6A4-204ENST00000578609 RNASEKQ6P5S7 137 aaKnown RBP10.09□□□□□ -0.79
SLC6A4-204ENST00000578609 KRTAP26-1Q6PEX3 210 aa10.09□□□□□ -0.79
SLC6A4-204ENST00000578609 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
SLC6A4-204ENST00000578609 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
SLC6A4-204ENST00000578609 COX19Q49B96 90 aa10.08□□□□□ -0.8
SLC6A4-204ENST00000578609 GNB1LQ9BYB4 327 aa10.08□□□□□ -0.8
SLC6A4-204ENST00000578609 DNAH5Q8TE73 4624 aa10.08□□□□□ -0.8
SLC6A4-204ENST00000578609 OR5A1Q8NGJ0 315 aa10.07□□□□□ -0.8
SLC6A4-204ENST00000578609 NTN5Q8WTR8 489 aaPredicted RBP10.07□□□□□ -0.8
SLC6A4-204ENST00000578609 BAALCQ8WXS3 180 aa10.07□□□□□ -0.8
SLC6A4-204ENST00000578609 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms