RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 TCAPO15273 167 aa8.32□□□□□ -1.08
IFT20-207ENST00000578547 RPL32P62910 135 aaKnown RBP8.32□□□□□ -1.08
IFT20-207ENST00000578547 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
IFT20-207ENST00000578547 ALMS1Q8TCU4 4167 aa8.32□□□□□ -1.08
IFT20-207ENST00000578547 LYSTQ99698 3801 aa8.31□□□□□ -1.08
IFT20-207ENST00000578547 LCE6AA0A183 80 aa8.31□□□□□ -1.08
IFT20-207ENST00000578547 IFI27P40305 119 aaPredicted RBP8.31□□□□□ -1.08
IFT20-207ENST00000578547 Q8N8P6 123 aa8.31□□□□□ -1.08
IFT20-207ENST00000578547 PRSS3P2Q8NHM4 247 aa8.31□□□□□ -1.08
IFT20-207ENST00000578547 C18orf32Q8TCD1 76 aa8.31□□□□□ -1.08
IFT20-207ENST00000578547 TMEM243Q9BU79 118 aa8.31□□□□□ -1.08
IFT20-207ENST00000578547 IGLV2-18A0A075B6J9 118 aa8.3□□□□□ -1.08
IFT20-207ENST00000578547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
IFT20-207ENST00000578547 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
IFT20-207ENST00000578547 PRSS47A8MTI9 375 aa8.3□□□□□ -1.08
IFT20-207ENST00000578547 UBE2L6O14933 153 aa8.3□□□□□ -1.08
IFT20-207ENST00000578547 GAGE6Q13070 117 aa8.3□□□□□ -1.08
IFT20-207ENST00000578547 UPK3BQ9BT76 320 aa8.3□□□□□ -1.08
IFT20-207ENST00000578547 NXT2Q9NPJ8 142 aaKnown RBP8.3□□□□□ -1.08
IFT20-207ENST00000578547 VPS13DQ5THJ4 4388 aa8.3□□□□□ -1.08
IFT20-207ENST00000578547 KMT2CQ8NEZ4 4911 aaKnown RBP8.29□□□□□ -1.08
IFT20-207ENST00000578547 DNAH1Q9P2D7 4330 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 TMEM262E9PQX1 116 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 SIVA1O15304 175 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 IGHV3-30P01768 117 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 IGHV3-33P01772 117 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 IGHV3-30-5P0DP03 117 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 FA2HQ7L5A8 372 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 Q8N3U1 123 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 CHCHD7Q9BUK0 85 aa8.29□□□□□ -1.08
IFT20-207ENST00000578547 A0A087WX48 190 aa8.28□□□□□ -1.08
IFT20-207ENST00000578547 RNASEKQ6P5S7 137 aaKnown RBP8.28□□□□□ -1.08
IFT20-207ENST00000578547 Q9H8V8 135 aa8.28□□□□□ -1.08
IFT20-207ENST00000578547 MPV17L2Q567V2 206 aa8.27□□□□□ -1.09
IFT20-207ENST00000578547 AMMECR1LQ6DCA0 310 aa8.27□□□□□ -1.09
IFT20-207ENST00000578547 NIT1Q86X76 327 aa8.27□□□□□ -1.09
IFT20-207ENST00000578547 SACSQ9NZJ4 4579 aa8.26□□□□□ -1.09
IFT20-207ENST00000578547 ESDP10768 282 aa8.26□□□□□ -1.09
IFT20-207ENST00000578547 LAGE3Q14657 143 aa8.26□□□□□ -1.09
IFT20-207ENST00000578547 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
IFT20-207ENST00000578547 LINC01556Q5JQF7 62 aa8.26□□□□□ -1.09
IFT20-207ENST00000578547 BAGE3Q86Y29 109 aa8.26□□□□□ -1.09
IFT20-207ENST00000578547 RYR2Q92736 4967 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 HYDINQ4G0P3 5121 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 C1orf196B1AJZ1 125 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 M0R2N4 97 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 DNAH10OSP0CZ25 163 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 FGF6P10767 208 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 BTF3P20290 206 aaKnown RBP8.25□□□□□ -1.09
IFT20-207ENST00000578547 RAB5BP61020 215 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 PKIAP61925 76 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 RPL39P62891 51 aaKnown RBP8.25□□□□□ -1.09
IFT20-207ENST00000578547 Q8N976 141 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 URB1-AS1Q96HZ7 61 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 AP5S1Q9NUS5 200 aa8.25□□□□□ -1.09
IFT20-207ENST00000578547 K7EMI3 77 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BKO60814 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 ANGP03950 147 aaKnown RBP8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BJP06899 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 LINC00614P0C842 121 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BOP23527 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BBP33778 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BDP58876 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BCP62807 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 RBX1P62877 108 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST2H2BEQ16778 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BHQ93079 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 TMEM18Q96B42 140 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BNQ99877 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 HIST1H2BMQ99879 126 aa8.24□□□□□ -1.09
IFT20-207ENST00000578547 TRAV9-2A0A087WT02 112 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 H7C423 109 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 Q0VG73 95 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 PMCHL1Q16048 86 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 C2orf66Q6UXQ4 117 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 TMEM101Q96IK0 257 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 KRTAP1-5Q9BYS1 174 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 KLK12Q9UKR0 248 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 CYSLTR1Q9Y271 337 aa8.23□□□□□ -1.09
IFT20-207ENST00000578547 IGLV4-60A0A075B6I1 120 aa8.22□□□□□ -1.09
IFT20-207ENST00000578547 LINC01546A6NGU7 62 aa8.22□□□□□ -1.09
IFT20-207ENST00000578547 SERF1AO75920 110 aa8.22□□□□□ -1.09
IFT20-207ENST00000578547 DGAT2L7PQ6IED9 249 aa8.22□□□□□ -1.09
IFT20-207ENST00000578547 CLPSL2Q6UWE3 100 aa8.22□□□□□ -1.09
IFT20-207ENST00000578547 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
IFT20-207ENST00000578547 UBE2D4Q9Y2X8 147 aa8.22□□□□□ -1.09
IFT20-207ENST00000578547 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
IFT20-207ENST00000578547 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
IFT20-207ENST00000578547 MRPL52Q86TS9 123 aaKnown RBP8.21□□□□□ -1.1
IFT20-207ENST00000578547 C10orf126Q8N4M7 172 aa8.21□□□□□ -1.1
IFT20-207ENST00000578547 CHCHD1Q96BP2 118 aaKnown RBP8.21□□□□□ -1.1
IFT20-207ENST00000578547 Q9HAA7 133 aa8.21□□□□□ -1.1
IFT20-207ENST00000578547 SPANXA1Q9NS26 97 aa8.21□□□□□ -1.1
IFT20-207ENST00000578547 KMT2AQ03164 3969 aa8.21□□□□□ -1.1
IFT20-207ENST00000578547 IGKV3OR2-268A0A0C4DH90 116 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms