RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
LINC01543-201ENST00000578367 IGHV3-38A0A0C4DH36 116 aa9.49□□□□□ -0.89
LINC01543-201ENST00000578367 NTM-AS1Q6ZSK4 140 aa9.49□□□□□ -0.89
LINC01543-201ENST00000578367 C10orf126Q8N4M7 172 aa9.49□□□□□ -0.89
LINC01543-201ENST00000578367 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
LINC01543-201ENST00000578367 NXT2Q9NPJ8 142 aaKnown RBP9.49□□□□□ -0.89
LINC01543-201ENST00000578367 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
LINC01543-201ENST00000578367 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
LINC01543-201ENST00000578367 AMTP48728 403 aa9.48□□□□□ -0.89
LINC01543-201ENST00000578367 SMAGPQ0VAQ4 97 aa9.48□□□□□ -0.89
LINC01543-201ENST00000578367 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
LINC01543-201ENST00000578367 DNAH1Q9P2D7 4330 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 TSHBP01222 138 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 RAB5AP20339 215 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 G0S2P27469 103 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 FCER1GP30273 86 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 NIT1Q86X76 327 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 Q8N8P6 123 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 TMEM18Q96B42 140 aa9.47□□□□□ -0.89
LINC01543-201ENST00000578367 ESDP10768 282 aa9.46□□□□□ -0.9
LINC01543-201ENST00000578367 KIAA1644Q3SXP7 199 aa9.46□□□□□ -0.9
LINC01543-201ENST00000578367 WFDC10BQ8IUB3 73 aa9.46□□□□□ -0.9
LINC01543-201ENST00000578367 CHCHD5Q9BSY4 110 aa9.46□□□□□ -0.9
LINC01543-201ENST00000578367 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
LINC01543-201ENST00000578367 A0A087WX48 190 aa9.45□□□□□ -0.9
LINC01543-201ENST00000578367 NBDYA0A0U1RRE5 68 aa9.45□□□□□ -0.9
LINC01543-201ENST00000578367 A0A1B0GUV1 79 aa9.45□□□□□ -0.9
LINC01543-201ENST00000578367 LINC01549A6NIU2 74 aa9.45□□□□□ -0.9
LINC01543-201ENST00000578367 UBE2L6O14933 153 aa9.45□□□□□ -0.9
LINC01543-201ENST00000578367 LINC01546A6NGU7 62 aa9.44□□□□□ -0.9
LINC01543-201ENST00000578367 SCO1O75880 301 aa9.44□□□□□ -0.9
LINC01543-201ENST00000578367 ZNF25P17030 456 aaPredicted RBP9.44□□□□□ -0.9
LINC01543-201ENST00000578367 LAGE3Q14657 143 aa9.44□□□□□ -0.9
LINC01543-201ENST00000578367 ORMDL2Q53FV1 153 aa9.44□□□□□ -0.9
LINC01543-201ENST00000578367 LYSTQ99698 3801 aa9.44□□□□□ -0.9
LINC01543-201ENST00000578367 TMEM262E9PQX1 116 aa9.43□□□□□ -0.9
LINC01543-201ENST00000578367 RAB5BP61020 215 aa9.43□□□□□ -0.9
LINC01543-201ENST00000578367 Q6ZR54 194 aa9.43□□□□□ -0.9
LINC01543-201ENST00000578367 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
LINC01543-201ENST00000578367 PRSS3P2Q8NHM4 247 aa9.43□□□□□ -0.9
LINC01543-201ENST00000578367 LOC389332A0A1B0GUA5 103 aa9.42□□□□□ -0.9
LINC01543-201ENST00000578367 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
LINC01543-201ENST00000578367 TIMM21Q9BVV7 248 aa9.42□□□□□ -0.9
LINC01543-201ENST00000578367 CSDC2Q9Y534 153 aaKnown RBP9.42□□□□□ -0.9
LINC01543-201ENST00000578367 SACSQ9NZJ4 4579 aa9.42□□□□□ -0.9
LINC01543-201ENST00000578367 IBA57-AS1B1ANH7 110 aa9.41□□□□□ -0.9
LINC01543-201ENST00000578367 TRGC2P03986 189 aa9.41□□□□□ -0.9
LINC01543-201ENST00000578367 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
LINC01543-201ENST00000578367 C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
LINC01543-201ENST00000578367 KMT2CQ8NEZ4 4911 aaKnown RBP9.4□□□□□ -0.9
LINC01543-201ENST00000578367 NPSP0C0P6 89 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 RBX1P62877 108 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 Q0VG73 95 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 GAGE6Q13070 117 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 AMMECR1LQ6DCA0 310 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 FA2HQ7L5A8 372 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 NFE4Q86UQ8 179 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 TMEM101Q96IK0 257 aa9.4□□□□□ -0.9
LINC01543-201ENST00000578367 TRAV8-3A0A0A6YYJ7 113 aa9.39□□□□□ -0.91
LINC01543-201ENST00000578367 FGF6P10767 208 aa9.39□□□□□ -0.91
LINC01543-201ENST00000578367 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
LINC01543-201ENST00000578367 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
LINC01543-201ENST00000578367 AP5S1Q9NUS5 200 aa9.39□□□□□ -0.91
LINC01543-201ENST00000578367 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
LINC01543-201ENST00000578367 DNAH6Q9C0G6 4158 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 IGHV3-30P01768 117 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 LINC00614P0C842 121 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 IGHV3-30-3P0DP02 117 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 IGHV3-30-5P0DP03 117 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
LINC01543-201ENST00000578367 CYSLTR1Q9Y271 337 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 COX11Q9Y6N1 276 aa9.38□□□□□ -0.91
LINC01543-201ENST00000578367 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.37□□□□□ -0.91
LINC01543-201ENST00000578367 IGKV2-29A2NJV5 120 aaPredicted RBP9.37□□□□□ -0.91
LINC01543-201ENST00000578367 OR5A1Q8NGJ0 315 aa9.37□□□□□ -0.91
LINC01543-201ENST00000578367 PRR34Q9NV39 138 aa9.37□□□□□ -0.91
LINC01543-201ENST00000578367 UBE2D4Q9Y2X8 147 aa9.37□□□□□ -0.91
LINC01543-201ENST00000578367 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
LINC01543-201ENST00000578367 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
LINC01543-201ENST00000578367 MIAQ16674 131 aa9.36□□□□□ -0.91
LINC01543-201ENST00000578367 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
LINC01543-201ENST00000578367 DGAT2L7PQ6IED9 249 aa9.36□□□□□ -0.91
LINC01543-201ENST00000578367 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
LINC01543-201ENST00000578367 C6orf223Q8N319 242 aa9.36□□□□□ -0.91
LINC01543-201ENST00000578367 DEFB104AQ8WTQ1 72 aa9.36□□□□□ -0.91
LINC01543-201ENST00000578367 RMI2Q96E14 147 aa9.36□□□□□ -0.91
LINC01543-201ENST00000578367 TRAV8-4A0A0B4J246 113 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 CCL25O15444 150 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 CRPP02741 224 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 PAPPA-AS1Q5QFB9 102 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 C2orf66Q6UXQ4 117 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 Q8N976 141 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 TOMM6Q96B49 74 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 TM2D2Q9BX73 214 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 KRTAP1-5Q9BYS1 174 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
LINC01543-201ENST00000578367 IGLV4-60A0A075B6I1 120 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms