RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 TMEM262E9PQX1 116 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 H2AFB1P0C5Y9 115 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 RAB5CP51148 216 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 FOXI1Q12951 378 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 SRSF9Q13242 221 aaKnown RBP eCLIP2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 KRTAP11-1Q8IUC1 163 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 NUDT10Q8NFP7 164 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 OR2D3Q8NGH3 330 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 RMI2Q96E14 147 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 LINC00526Q96FQ7 95 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 NUDT11Q96G61 164 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 GNG13Q9P2W3 67 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 PLA2G2DQ9UNK4 145 aa2.77□□□□□ -1.97
PPP4R1-209ENST00000578329 LPAP08519 4548 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 A0A096LNI7 61 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 IGHV1-24A0A0C4DH33 117 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 UMAD1C9J7I0 102 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 F5H697 171 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 PHOX2AO14813 284 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 S100A9P06702 114 aaKnown RBP2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 ESDP10768 282 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 NTF3P20783 257 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 RPS10P46783 165 aaKnown RBP2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 SULT1A2P50226 295 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 COX6A2Q02221 97 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 ELOBQ15370 118 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 RGS21Q2M5E4 152 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 SPANXN1Q5VSR9 72 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 RASL11AQ6T310 242 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 KRTAP7-1Q8IUC3 87 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 FER1L6-AS1Q8NA97 138 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 OCC1Q8TAD7 63 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 RNF185Q96GF1 192 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 PGLYRP4Q96LB8 373 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 RNASE7Q9H1E1 156 aaKnown RBP2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 URGCP-MRPS24S4R325 110 aa2.76□□□□□ -1.97
PPP4R1-209ENST00000578329 TRBV25-1A0A075B6N4 114 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 GVQW2A0A096LPI5 108 aaPredicted RBP2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 A0A0D9SG52 128 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 hDV102S1A0JD36 115 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 IGKV2-29A2NJV5 120 aaPredicted RBP2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 GAGE12HA6NDE8 117 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 TSHBP01222 138 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 MGPP08493 103 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 PRR3P79522 188 aaKnown RBP2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 MEF2BQ02080 365 aaPredicted RBP2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 HIGD2BQ4VC39 106 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 C14orf177Q52M58 125 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 WDR73Q6P4I2 378 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 Q6ZRU5 148 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 CLRN3Q8NCR9 226 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 LYPD6BQ8NI32 183 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 LINC01600Q96MT4 127 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 AP1S3Q96PC3 154 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 TMEM243Q9BU79 118 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 NIT2Q9NQR4 276 aa2.75□□□□□ -1.97
PPP4R1-209ENST00000578329 TRAV8-4A0A0B4J246 113 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 TRBV6-5A0A0K0K1A5 114 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 A0A1W2PNN7 141 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 C9JQL5 133 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 H7C1H1 209 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 P01737 135 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 CRPP02741 224 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 BCL2P10415 239 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 POLR2KP53803 58 aaKnown RBP2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 CHCHD10Q8WYQ3 142 aaPredicted RBP2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 TPPP3Q9BW30 176 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 DPH3P1Q9H4G8 78 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 MANBALQ9NQG1 85 aa2.74□□□□□ -1.97
PPP4R1-209ENST00000578329 IGHV3-64A0A075B6Q5 118 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 A0A0J9YXV3 536 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 LINC00959A0A1B0GUT2 108 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 F2Z2F3 143 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 PFDN1O60925 122 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 IFNA1P01562 189 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 FGF6P10767 208 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 AMTP48728 403 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 GNG4P50150 75 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 CACNG7P62955 275 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 TMEM97Q5BJF2 176 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 TCTE3Q8IZS6 198 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 NRACQ8N912 160 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 SMIM12Q96EX1 92 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 RPP21Q9H633 154 aaKnown RBP2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 MED9Q9NWA0 146 aa2.73□□□□□ -1.97
PPP4R1-209ENST00000578329 MUC2Q02817 5179 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 IGKV2-24A0A0C4DH68 120 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 IGKV3OR2-268A0A0C4DH90 116 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 KANTRA0A1W2PQU2 76 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 SDHAF1A6NFY7 115 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 SMKR1H3BMG3 65 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 RAB4AP20338 218 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 RPS20P60866 119 aaKnown RBP2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 FAM231DQ6ZW35 169 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 MRPL52Q86TS9 123 aaKnown RBP2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 STPG4Q8N801 248 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 CDC42SE2Q9NRR3 84 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 TMEM242Q9NWH2 141 aa2.72□□□□□ -1.97
PPP4R1-209ENST00000578329 TRBV27A0A0K0K1C4 114 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms