RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 LINC00518Q8N0U6 118 aa13.07□□□□□ -0.32
PRKCA-203ENST00000578063 DNHD1Q96M86 4753 aa13.06□□□□□ -0.32
PRKCA-203ENST00000578063 SYS1-DBNDD2H3BUS1 97 aa13.06□□□□□ -0.32
PRKCA-203ENST00000578063 SCGB1D1O95968 90 aa13.06□□□□□ -0.32
PRKCA-203ENST00000578063 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
PRKCA-203ENST00000578063 IFI27L1Q96BM0 104 aa13.06□□□□□ -0.32
PRKCA-203ENST00000578063 A0A0J9YWU9 116 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 C12orf74Q32Q52 190 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 DEFB104AQ8WTQ1 72 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 ZMAT4Q9H898 229 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 IGHV3-38A0A0C4DH36 116 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 LINC00694P0DN24 101 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 PET117Q6UWS5 81 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 C12orf57Q99622 126 aa13.05□□□□□ -0.32
PRKCA-203ENST00000578063 SPATA12Q7Z6I5 190 aa13.04□□□□□ -0.32
PRKCA-203ENST00000578063 C20orf203Q8NBC4 194 aa13.04□□□□□ -0.32
PRKCA-203ENST00000578063 C20orf202A1L168 122 aa13.03□□□□□ -0.32
PRKCA-203ENST00000578063 PAX4O43316 350 aa13.03□□□□□ -0.32
PRKCA-203ENST00000578063 SCGB3A1Q96QR1 104 aa13.03□□□□□ -0.32
PRKCA-203ENST00000578063 F5H768 121 aa13.02□□□□□ -0.32
PRKCA-203ENST00000578063 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.02□□□□□ -0.32
PRKCA-203ENST00000578063 GYPEP15421 78 aa13.02□□□□□ -0.32
PRKCA-203ENST00000578063 ERASQ7Z444 233 aa13.02□□□□□ -0.32
PRKCA-203ENST00000578063 Q8N976 141 aa13.02□□□□□ -0.32
PRKCA-203ENST00000578063 B9D2Q9BPU9 175 aa13.02□□□□□ -0.33
PRKCA-203ENST00000578063 HTN3P15516 51 aa13.01□□□□□ -0.33
PRKCA-203ENST00000578063 RPL39P62891 51 aaKnown RBP13.01□□□□□ -0.33
PRKCA-203ENST00000578063 CHCHD7Q9BUK0 85 aa13.01□□□□□ -0.33
PRKCA-203ENST00000578063 GTSF1LQ9H1H1 148 aa13.01□□□□□ -0.33
PRKCA-203ENST00000578063 H0Y8G0 127 aa13□□□□□ -0.33
PRKCA-203ENST00000578063 C11orf45Q8TAV5 145 aa13□□□□□ -0.33
PRKCA-203ENST00000578063 VSIG2Q96IQ7 327 aa13□□□□□ -0.33
PRKCA-203ENST00000578063 TIMM17AQ99595 171 aa13□□□□□ -0.33
PRKCA-203ENST00000578063 TMEM97Q5BJF2 176 aa12.99□□□□□ -0.33
PRKCA-203ENST00000578063 LINC01545Q5VT33 79 aa12.99□□□□□ -0.33
PRKCA-203ENST00000578063 Q6ZN92 141 aa12.99□□□□□ -0.33
PRKCA-203ENST00000578063 TMEM141Q96I45 108 aa12.99□□□□□ -0.33
PRKCA-203ENST00000578063 TRAV26-1A0A087WT03 109 aa12.99□□□□□ -0.33
PRKCA-203ENST00000578063 IGIPA6NJ69 53 aa12.99□□□□□ -0.33
PRKCA-203ENST00000578063 PRSS1P07477 247 aa12.99□□□□□ -0.33
PRKCA-203ENST00000578063 A0A0J9YY99 117 aa12.98□□□□□ -0.33
PRKCA-203ENST00000578063 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
PRKCA-203ENST00000578063 CDPF1Q6NVV7 123 aa12.98□□□□□ -0.33
PRKCA-203ENST00000578063 Q6ZTC4 211 aa12.98□□□□□ -0.33
PRKCA-203ENST00000578063 NTM-AS1Q6ZSK4 140 aa12.97□□□□□ -0.33
PRKCA-203ENST00000578063 ATP6V0E2Q8NHE4 81 aa12.97□□□□□ -0.33
PRKCA-203ENST00000578063 TEX43Q6ZNM6 134 aa12.96□□□□□ -0.33
PRKCA-203ENST00000578063 PYGO1Q9Y3Y4 419 aa12.96□□□□□ -0.33
PRKCA-203ENST00000578063 TENM3Q9P273 2699 aa12.96□□□□□ -0.34
PRKCA-203ENST00000578063 NPSP0C0P6 89 aa12.96□□□□□ -0.34
PRKCA-203ENST00000578063 NANOS2P60321 138 aaKnown RBP12.96□□□□□ -0.34
PRKCA-203ENST00000578063 S100A12P80511 92 aa12.96□□□□□ -0.34
PRKCA-203ENST00000578063 SPANXA1Q9NS26 97 aa12.96□□□□□ -0.34
PRKCA-203ENST00000578063 TRBV25-1A0A075B6N4 114 aa12.95□□□□□ -0.34
PRKCA-203ENST00000578063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.95□□□□□ -0.34
PRKCA-203ENST00000578063 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
PRKCA-203ENST00000578063 IGKV2-29A2NJV5 120 aaPredicted RBP12.95□□□□□ -0.34
PRKCA-203ENST00000578063 DEFA6Q01524 100 aa12.95□□□□□ -0.34
PRKCA-203ENST00000578063 SH2D6Q7Z4S9 175 aa12.95□□□□□ -0.34
PRKCA-203ENST00000578063 BAALCQ8WXS3 180 aa12.95□□□□□ -0.34
PRKCA-203ENST00000578063 H3BNG1 76 aa12.94□□□□□ -0.34
PRKCA-203ENST00000578063 SMAGPQ0VAQ4 97 aa12.94□□□□□ -0.34
PRKCA-203ENST00000578063 MRPL23Q16540 153 aaKnown RBP12.94□□□□□ -0.34
PRKCA-203ENST00000578063 TMEM243Q9BU79 118 aa12.94□□□□□ -0.34
PRKCA-203ENST00000578063 ICOSQ9Y6W8 199 aa12.94□□□□□ -0.34
PRKCA-203ENST00000578063 HUWE1Q7Z6Z7 4374 aaKnown RBP12.94□□□□□ -0.34
PRKCA-203ENST00000578063 TRBV6-8A0A0A6YYG3 113 aa12.93□□□□□ -0.34
PRKCA-203ENST00000578063 ODF1Q14990 250 aa12.93□□□□□ -0.34
PRKCA-203ENST00000578063 PAPPA-AS1Q5QFB9 102 aa12.93□□□□□ -0.34
PRKCA-203ENST00000578063 UBE2D4Q9Y2X8 147 aa12.93□□□□□ -0.34
PRKCA-203ENST00000578063 TIMM21Q9BVV7 248 aa12.93□□□□□ -0.34
PRKCA-203ENST00000578063 A0A087WX48 190 aa12.92□□□□□ -0.34
PRKCA-203ENST00000578063 H7C423 109 aa12.92□□□□□ -0.34
PRKCA-203ENST00000578063 NHLRC4P0CG21 123 aaPredicted RBP12.92□□□□□ -0.34
PRKCA-203ENST00000578063 PMCHL2Q9BQD1 86 aa12.92□□□□□ -0.34
PRKCA-203ENST00000578063 IGLV4-3A0A075B6K6 122 aa12.91□□□□□ -0.34
PRKCA-203ENST00000578063 DEFB131BA0A096LNP1 70 aa12.91□□□□□ -0.34
PRKCA-203ENST00000578063 UBE2L6O14933 153 aa12.91□□□□□ -0.34
PRKCA-203ENST00000578063 PMVKQ15126 192 aa12.91□□□□□ -0.34
PRKCA-203ENST00000578063 VAMP8Q9BV40 100 aa12.91□□□□□ -0.34
PRKCA-203ENST00000578063 MEGF8Q7Z7M0 2845 aa12.91□□□□□ -0.34
PRKCA-203ENST00000578063 MRPL52Q86TS9 123 aaKnown RBP12.91□□□□□ -0.34
PRKCA-203ENST00000578063 ATOH7Q8N100 152 aa12.91□□□□□ -0.34
PRKCA-203ENST00000578063 A0A096LPF7 62 aa12.89□□□□□ -0.35
PRKCA-203ENST00000578063 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
PRKCA-203ENST00000578063 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
PRKCA-203ENST00000578063 F8VRH5 84 aa12.89□□□□□ -0.35
PRKCA-203ENST00000578063 FGF6P10767 208 aa12.89□□□□□ -0.35
PRKCA-203ENST00000578063 CSDC2Q9Y534 153 aaKnown RBP12.89□□□□□ -0.35
PRKCA-203ENST00000578063 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
PRKCA-203ENST00000578063 DGAT2L7PQ6IED9 249 aa12.88□□□□□ -0.35
PRKCA-203ENST00000578063 CST9LQ9H4G1 147 aa12.88□□□□□ -0.35
PRKCA-203ENST00000578063 MRPL35Q9NZE8 188 aaKnown RBP12.88□□□□□ -0.35
PRKCA-203ENST00000578063 CHTOPQ9Y3Y2 248 aaKnown RBP12.88□□□□□ -0.35
PRKCA-203ENST00000578063 TRAV9-2A0A087WT02 112 aa12.88□□□□□ -0.35
PRKCA-203ENST00000578063 DPM2O94777 84 aa12.88□□□□□ -0.35
PRKCA-203ENST00000578063 CEMP1Q6PRD7 247 aaPredicted RBP12.88□□□□□ -0.35
PRKCA-203ENST00000578063 OPRPNQ99935 248 aaPredicted RBP12.88□□□□□ -0.35
PRKCA-203ENST00000578063 CHCHD5Q9BSY4 110 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms