RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 UBE2D1P51668 147 aa10.89□□□□□ -0.67
CUEDC1-206ENST00000577830 APRG1Q8IVJ8 170 aa10.89□□□□□ -0.67
CUEDC1-206ENST00000577830 HOXD3P31249 432 aaPredicted RBP10.89□□□□□ -0.67
CUEDC1-206ENST00000577830 BBC3Q96PG8 261 aaPredicted RBP10.89□□□□□ -0.67
CUEDC1-206ENST00000577830 B4DSR2 109 aa10.89□□□□□ -0.67
CUEDC1-206ENST00000577830 DGAT2L7PQ6IED9 249 aa10.89□□□□□ -0.67
CUEDC1-206ENST00000577830 I3L3M4 83 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 SLC25A29Q8N8R3 303 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 RPL32P62910 135 aaKnown RBP10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 FAM19A4Q96LR4 140 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 LINC01587Q99440 93 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 TIMM17AQ99595 171 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 TIMM21Q9BVV7 248 aa10.88□□□□□ -0.67
CUEDC1-206ENST00000577830 TRAV25A0A0B4J276 109 aa10.87□□□□□ -0.67
CUEDC1-206ENST00000577830 IGLV1-40P01703 118 aa10.87□□□□□ -0.67
CUEDC1-206ENST00000577830 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
CUEDC1-206ENST00000577830 UBE2E2Q96LR5 201 aa10.87□□□□□ -0.67
CUEDC1-206ENST00000577830 SLC25A20O43772 301 aa10.87□□□□□ -0.67
CUEDC1-206ENST00000577830 MED14OSP0DP75 135 aa10.87□□□□□ -0.67
CUEDC1-206ENST00000577830 C20orf203Q8NBC4 194 aa10.87□□□□□ -0.67
CUEDC1-206ENST00000577830 TRBV27A0A0K0K1C4 114 aa10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 RHODO00212 210 aa10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 XGP55808 180 aa10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 NTN5Q8WTR8 489 aaPredicted RBP10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 CARD19Q96LW7 228 aa10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 IGKV3OR2-268A0A0C4DH90 116 aa10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 FHL3Q13643 280 aa10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 PPDPFLQ8WWR9 84 aa10.86□□□□□ -0.67
CUEDC1-206ENST00000577830 IGLV4-3A0A075B6K6 122 aa10.85□□□□□ -0.67
CUEDC1-206ENST00000577830 LGALS9O00182 355 aa10.85□□□□□ -0.67
CUEDC1-206ENST00000577830 ELANEP08246 267 aa10.85□□□□□ -0.67
CUEDC1-206ENST00000577830 ANAPC13Q9BS18 74 aa10.85□□□□□ -0.67
CUEDC1-206ENST00000577830 IGHV3-30-3P0DP02 117 aa10.85□□□□□ -0.67
CUEDC1-206ENST00000577830 TEN1Q86WV5 123 aa10.85□□□□□ -0.67
CUEDC1-206ENST00000577830 XCL2Q9UBD3 114 aa10.85□□□□□ -0.67
CUEDC1-206ENST00000577830 H3BUA1 57 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 PSMB8P28062 276 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 DYNLRB2Q8TF09 96 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 FAM110AQ9BQ89 295 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 SPATA25Q9BR10 227 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 K7EQG2 157 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 RBMY1A1P0DJD3 496 aaKnown RBP10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 RBMY1CP0DJD4 496 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 RBMY1FQ15415 496 aaKnown RBP10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 NIPBLQ6KC79 2804 aaeCLIP10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 NDUFA12Q9UI09 145 aa10.84□□□□□ -0.67
CUEDC1-206ENST00000577830 TMEM223A0PJW6 202 aa10.83□□□□□ -0.68
CUEDC1-206ENST00000577830 LEPROTO15243 131 aa10.83□□□□□ -0.68
CUEDC1-206ENST00000577830 KLK9Q2XQG4 91 aa10.83□□□□□ -0.68
CUEDC1-206ENST00000577830 C9orf85Q96MD7 179 aa10.83□□□□□ -0.68
CUEDC1-206ENST00000577830 Q6ZSN1 163 aa10.83□□□□□ -0.68
CUEDC1-206ENST00000577830 CDIP1Q9H305 208 aa10.83□□□□□ -0.68
CUEDC1-206ENST00000577830 UBE2D3P61077 147 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 UBE2D2P62837 147 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 TRGV11A0A075B6L2 103 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 A0A0J9YXY3 114 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 K7EMT4 169 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 Q6ZUT4 128 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 CLEC2BQ92478 149 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 NXPH4O95158 308 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 CFHR3Q02985 330 aa10.82□□□□□ -0.68
CUEDC1-206ENST00000577830 IGHV3-33P01772 117 aa10.81□□□□□ -0.68
CUEDC1-206ENST00000577830 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
CUEDC1-206ENST00000577830 TRBV20-1A0A075B6N2 111 aa10.81□□□□□ -0.68
CUEDC1-206ENST00000577830 TEX49A0A1B0GTD5 131 aa10.81□□□□□ -0.68
CUEDC1-206ENST00000577830 KRTAP10-9P60411 292 aa10.81□□□□□ -0.68
CUEDC1-206ENST00000577830 PPDPFQ9H3Y8 114 aa10.81□□□□□ -0.68
CUEDC1-206ENST00000577830 LINC01619G3V211 115 aa10.8□□□□□ -0.68
CUEDC1-206ENST00000577830 ADAMTSL4-AS1Q5T5F5 129 aa10.8□□□□□ -0.68
CUEDC1-206ENST00000577830 TMEM61Q8N0U2 210 aa10.8□□□□□ -0.68
CUEDC1-206ENST00000577830 RHOHQ15669 191 aa10.8□□□□□ -0.68
CUEDC1-206ENST00000577830 EIF4EBP3O60516 100 aaPredicted RBP10.79□□□□□ -0.68
CUEDC1-206ENST00000577830 NDUFA7O95182 113 aa10.79□□□□□ -0.68
CUEDC1-206ENST00000577830 AMELXQ99217 191 aa10.79□□□□□ -0.68
CUEDC1-206ENST00000577830 C5orf47Q569G3 176 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 HIST2H2BCQ6DN03 193 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 TRIAP1O43715 76 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 LINC00467Q9BRT7 94 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 TRGV1A0A0A0MS02 117 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 TRBV6-5A0A0K0K1A5 114 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 NSUN5P1Q3KNT7 163 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 C2orf82Q6UX34 121 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 TEX29Q8N6K0 151 aa10.78□□□□□ -0.68
CUEDC1-206ENST00000577830 TMEM263Q8WUH6 116 aaKnown RBP10.77□□□□□ -0.68
CUEDC1-206ENST00000577830 HIVEP2P31629 2446 aa10.77□□□□□ -0.69
CUEDC1-206ENST00000577830 M0R2P5 195 aa10.77□□□□□ -0.69
CUEDC1-206ENST00000577830 LINC01356Q8N9X3 169 aa10.77□□□□□ -0.69
CUEDC1-206ENST00000577830 ATXN8Q156A1 80 aa10.76□□□□□ -0.69
CUEDC1-206ENST00000577830 LINC01620Q4KN68 170 aa10.76□□□□□ -0.69
CUEDC1-206ENST00000577830 RNF183Q96D59 192 aa10.76□□□□□ -0.69
CUEDC1-206ENST00000577830 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
CUEDC1-206ENST00000577830 SNCGO76070 127 aa10.76□□□□□ -0.69
CUEDC1-206ENST00000577830 C1orf43Q9BWL3 253 aa10.76□□□□□ -0.69
CUEDC1-206ENST00000577830 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.76□□□□□ -0.69
CUEDC1-206ENST00000577830 MEIG1Q5JSS6 88 aa10.75□□□□□ -0.69
CUEDC1-206ENST00000577830 RBMY1BA6NDE4 496 aaKnown RBP10.75□□□□□ -0.69
CUEDC1-206ENST00000577830 RBMY1EA6NEQ0 496 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms