RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 C11orf52Q96A22 123 aa9.03□□□□□ -0.96
SMARCD2-205ENST00000577686 IGLV4-60A0A075B6I1 120 aa9.02□□□□□ -0.97
SMARCD2-205ENST00000577686 NDUFS6O75380 124 aaKnown RBP9.02□□□□□ -0.97
SMARCD2-205ENST00000577686 IFNA1P01562 189 aa9.02□□□□□ -0.97
SMARCD2-205ENST00000577686 CHTF8P0CG12 524 aa9.02□□□□□ -0.97
SMARCD2-205ENST00000577686 GNG4P50150 75 aa9.02□□□□□ -0.97
SMARCD2-205ENST00000577686 GNG13Q9P2W3 67 aa9.02□□□□□ -0.97
SMARCD2-205ENST00000577686 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.97
SMARCD2-205ENST00000577686 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 GAGE12HA6NDE8 117 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 G3V3Q6 166 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 PHOX2AO14813 284 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 BCL2L11O43521 198 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 RGS21Q2M5E4 152 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 MAJINQ3KP22 176 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 SMIM15Q7Z3B0 74 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 GTSF1Q8WW33 167 aa9.01□□□□□ -0.97
SMARCD2-205ENST00000577686 CCL20P78556 96 aa9□□□□□ -0.97
SMARCD2-205ENST00000577686 EIF5AL1Q6IS14 154 aaKnown RBP9□□□□□ -0.97
SMARCD2-205ENST00000577686 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
SMARCD2-205ENST00000577686 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
SMARCD2-205ENST00000577686 H7C423 109 aa8.99□□□□□ -0.97
SMARCD2-205ENST00000577686 PDE6DO43924 150 aa8.99□□□□□ -0.97
SMARCD2-205ENST00000577686 NCR2O95944 276 aa8.99□□□□□ -0.97
SMARCD2-205ENST00000577686 COX6A2Q02221 97 aa8.99□□□□□ -0.97
SMARCD2-205ENST00000577686 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
SMARCD2-205ENST00000577686 IGKV2-24A0A0C4DH68 120 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 C19orf71A6NCJ1 209 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 NTF3P20783 257 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 RNASEKQ6P5S7 137 aaKnown RBP8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 LYZL1Q6UWQ5 148 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 STPG4Q8N801 248 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 C15orf56Q8N910 161 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 BTF3L4Q96K17 158 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 GFRA4Q9GZZ7 299 aa8.98□□□□□ -0.97
SMARCD2-205ENST00000577686 GVQW2A0A096LPI5 108 aaPredicted RBP8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 APCSP02743 223 aa8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 SLPIP03973 132 aa8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 TWIST1Q15672 202 aa8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 HIGD2BQ4VC39 106 aa8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 TEX261Q6UWH6 196 aa8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 CHCHD10Q8WYQ3 142 aaPredicted RBP8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 TMEM101Q96IK0 257 aa8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
SMARCD2-205ENST00000577686 TRAV1-1A0A0B4J248 108 aa8.96□□□□□ -0.98
SMARCD2-205ENST00000577686 ZNF25P17030 456 aaPredicted RBP8.96□□□□□ -0.98
SMARCD2-205ENST00000577686 CTRLP40313 264 aa8.96□□□□□ -0.98
SMARCD2-205ENST00000577686 MEF2BQ02080 365 aaPredicted RBP8.96□□□□□ -0.98
SMARCD2-205ENST00000577686 C9orf62Q8N4C0 152 aa8.96□□□□□ -0.98
SMARCD2-205ENST00000577686 MED9Q9NWA0 146 aa8.96□□□□□ -0.98
SMARCD2-205ENST00000577686 PKHD1L1Q86WI1 4243 aa8.95□□□□□ -0.98
SMARCD2-205ENST00000577686 SMLR1H3BR10 107 aa8.95□□□□□ -0.98
SMARCD2-205ENST00000577686 TAGLN2P37802 199 aaKnown RBP8.95□□□□□ -0.98
SMARCD2-205ENST00000577686 SPINK6Q6UWN8 80 aa8.94□□□□□ -0.98
SMARCD2-205ENST00000577686 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
SMARCD2-205ENST00000577686 LYPD6BQ8NI32 183 aa8.94□□□□□ -0.98
SMARCD2-205ENST00000577686 FAM210AQ96ND0 272 aa8.94□□□□□ -0.98
SMARCD2-205ENST00000577686 IGHV1-58A0A0C4DH39 117 aa8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 RAB19A4D1S5 217 aa8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 FGF6P10767 208 aa8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 OR5A1Q8NGJ0 315 aa8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 CARD19Q96LW7 228 aa8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 CNFNQ9BYD5 112 aa8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 RPP21Q9H633 154 aaKnown RBP8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 UBR4Q5T4S7 5183 aa8.93□□□□□ -0.98
SMARCD2-205ENST00000577686 A0A0J9YXV3 536 aa8.92□□□□□ -0.98
SMARCD2-205ENST00000577686 Q6ZRP5 223 aa8.92□□□□□ -0.98
SMARCD2-205ENST00000577686 GATD1Q8NB37 220 aa8.92□□□□□ -0.98
SMARCD2-205ENST00000577686 ISOC2Q96AB3 205 aa8.92□□□□□ -0.98
SMARCD2-205ENST00000577686 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 A0A096LNI7 61 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 IGKV2-29A2NJV5 120 aaPredicted RBP8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 ZNF561-AS1K7EIQ3 104 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 BCL2P10415 239 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 PMCHP20382 165 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 SS18Q15532 418 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 NUDT10Q8NFP7 164 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 BORCS7Q96B45 105 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 NUDT11Q96G61 164 aa8.91□□□□□ -0.98
SMARCD2-205ENST00000577686 TRAV26-2A0A0B4J265 109 aa8.9□□□□□ -0.98
SMARCD2-205ENST00000577686 SDHAF1A6NFY7 115 aa8.9□□□□□ -0.98
SMARCD2-205ENST00000577686 I3L3M4 83 aa8.9□□□□□ -0.98
SMARCD2-205ENST00000577686 XCL1P47992 114 aa8.9□□□□□ -0.98
SMARCD2-205ENST00000577686 SMAGPQ0VAQ4 97 aa8.9□□□□□ -0.98
SMARCD2-205ENST00000577686 FOXI1Q12951 378 aa8.9□□□□□ -0.98
SMARCD2-205ENST00000577686 Q6ZNX1 250 aa8.9□□□□□ -0.98
SMARCD2-205ENST00000577686 MRAP2Q96G30 205 aa8.89□□□□□ -0.99
SMARCD2-205ENST00000577686 TRBV20OR9-2A0A075B6H5 130 aa8.88□□□□□ -0.99
SMARCD2-205ENST00000577686 CCL25O15444 150 aa8.88□□□□□ -0.99
SMARCD2-205ENST00000577686 SYCNQ0VAF6 134 aa8.88□□□□□ -0.99
SMARCD2-205ENST00000577686 RPL39LQ96EH5 51 aaKnown RBP8.88□□□□□ -0.99
SMARCD2-205ENST00000577686 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
SMARCD2-205ENST00000577686 ST20Q9HBF5 79 aa8.87□□□□□ -0.99
SMARCD2-205ENST00000577686 TRBV6-5A0A0K0K1A5 114 aa8.86□□□□□ -0.99
SMARCD2-205ENST00000577686 LOC107984640A0A0U1RRK4 108 aa8.86□□□□□ -0.99
SMARCD2-205ENST00000577686 A8MWL6 223 aa8.86□□□□□ -0.99
SMARCD2-205ENST00000577686 GATCO43716 136 aaKnown RBP8.86□□□□□ -0.99
SMARCD2-205ENST00000577686 MALP21145 153 aa8.86□□□□□ -0.99
SMARCD2-205ENST00000577686 CD164L2Q6UWJ8 174 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms