RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 LYZL1Q6UWQ5 148 aa8.58□□□□□ -1.04
CUEDC1-203ENST00000577422 SMIM12Q96EX1 92 aa8.58□□□□□ -1.04
CUEDC1-203ENST00000577422 NIT2Q9NQR4 276 aa8.58□□□□□ -1.04
CUEDC1-203ENST00000577422 NTF3P20783 257 aa8.57□□□□□ -1.04
CUEDC1-203ENST00000577422 CTRLP40313 264 aa8.57□□□□□ -1.04
CUEDC1-203ENST00000577422 RAB5CP51148 216 aa8.57□□□□□ -1.04
CUEDC1-203ENST00000577422 C9orf62Q8N4C0 152 aa8.57□□□□□ -1.04
CUEDC1-203ENST00000577422 CNFNQ9BYD5 112 aa8.57□□□□□ -1.04
CUEDC1-203ENST00000577422 DPH3P1Q9H4G8 78 aa8.57□□□□□ -1.04
CUEDC1-203ENST00000577422 IGHV3-64A0A075B6Q5 118 aa8.56□□□□□ -1.04
CUEDC1-203ENST00000577422 F2Z2F3 143 aa8.56□□□□□ -1.04
CUEDC1-203ENST00000577422 GNG4P50150 75 aa8.56□□□□□ -1.04
CUEDC1-203ENST00000577422 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
CUEDC1-203ENST00000577422 PLAC8Q9NZF1 115 aa8.56□□□□□ -1.04
CUEDC1-203ENST00000577422 MEF2BQ02080 365 aaPredicted RBP8.55□□□□□ -1.04
CUEDC1-203ENST00000577422 WDR73Q6P4I2 378 aa8.55□□□□□ -1.04
CUEDC1-203ENST00000577422 GATD1Q8NB37 220 aa8.55□□□□□ -1.04
CUEDC1-203ENST00000577422 TRAV26-2A0A0B4J265 109 aa8.54□□□□□ -1.04
CUEDC1-203ENST00000577422 TRGC1P0CF51 173 aa8.54□□□□□ -1.04
CUEDC1-203ENST00000577422 AMTP48728 403 aa8.54□□□□□ -1.04
CUEDC1-203ENST00000577422 SULT1A2P50226 295 aa8.54□□□□□ -1.04
CUEDC1-203ENST00000577422 EIF5AP63241 154 aaKnown RBP8.54□□□□□ -1.04
CUEDC1-203ENST00000577422 NUDT10Q8NFP7 164 aa8.54□□□□□ -1.04
CUEDC1-203ENST00000577422 NUDT11Q96G61 164 aa8.54□□□□□ -1.04
CUEDC1-203ENST00000577422 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 GAGE12HA6NDE8 117 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 K7EN84 100 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 PHOX2AO14813 284 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 PDE6DO43924 150 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 IFNA1P01562 189 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 COTL1Q14019 142 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 Q6ZNX1 250 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 AP5S1Q9NUS5 200 aa8.53□□□□□ -1.04
CUEDC1-203ENST00000577422 XKRY2A2RUG3 117 aa8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 BCL2P10415 239 aa8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 FOXA3P55318 350 aaPredicted RBP8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 COX6A2Q02221 97 aa8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 PRSS3P2Q8NHM4 247 aa8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 GTSF1Q8WW33 167 aa8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 MED9Q9NWA0 146 aa8.52□□□□□ -1.05
CUEDC1-203ENST00000577422 UBE2L6O14933 153 aa8.51□□□□□ -1.05
CUEDC1-203ENST00000577422 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
CUEDC1-203ENST00000577422 RNASE7Q9H1E1 156 aaKnown RBP8.51□□□□□ -1.05
CUEDC1-203ENST00000577422 GVQW2A0A096LPI5 108 aaPredicted RBP8.5□□□□□ -1.05
CUEDC1-203ENST00000577422 RPS10P46783 165 aaKnown RBP8.5□□□□□ -1.05
CUEDC1-203ENST00000577422 TWIST1Q15672 202 aa8.5□□□□□ -1.05
CUEDC1-203ENST00000577422 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
CUEDC1-203ENST00000577422 RPP21Q9H633 154 aaKnown RBP8.5□□□□□ -1.05
CUEDC1-203ENST00000577422 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 IGKV2-29A2NJV5 120 aaPredicted RBP8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 FAM231BA6NCW3 169 aa8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 NDUFS6O75380 124 aaKnown RBP8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 FOXI1Q12951 378 aa8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 ODF1Q14990 250 aa8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 OCC1Q8TAD7 63 aa8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
CUEDC1-203ENST00000577422 A0A096LNI7 61 aa8.48□□□□□ -1.05
CUEDC1-203ENST00000577422 GAS8-AS1O95177 125 aa8.48□□□□□ -1.05
CUEDC1-203ENST00000577422 NCR2O95944 276 aa8.48□□□□□ -1.05
CUEDC1-203ENST00000577422 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
CUEDC1-203ENST00000577422 DPH3Q96FX2 82 aa8.48□□□□□ -1.05
CUEDC1-203ENST00000577422 LINC01600Q96MT4 127 aa8.48□□□□□ -1.05
CUEDC1-203ENST00000577422 IGKV2-24A0A0C4DH68 120 aa8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 SDHAF1A6NFY7 115 aa8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 TEX46H3BTG2 121 aa8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 H7C423 109 aa8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 FGF6P10767 208 aa8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 MAJINQ3KP22 176 aa8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 EIF5AL1Q6IS14 154 aaKnown RBP8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 CFAP161Q6P656 301 aa8.47□□□□□ -1.05
CUEDC1-203ENST00000577422 ESDP10768 282 aa8.46□□□□□ -1.06
CUEDC1-203ENST00000577422 STPG4Q8N801 248 aa8.46□□□□□ -1.06
CUEDC1-203ENST00000577422 LPAP08519 4548 aa8.45□□□□□ -1.06
CUEDC1-203ENST00000577422 TRBV6-5A0A0K0K1A5 114 aa8.45□□□□□ -1.06
CUEDC1-203ENST00000577422 APCSP02743 223 aa8.45□□□□□ -1.06
CUEDC1-203ENST00000577422 RNASEKQ6P5S7 137 aaKnown RBP8.45□□□□□ -1.06
CUEDC1-203ENST00000577422 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
CUEDC1-203ENST00000577422 C7orf33Q8WU49 177 aa8.45□□□□□ -1.06
CUEDC1-203ENST00000577422 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
CUEDC1-203ENST00000577422 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
CUEDC1-203ENST00000577422 TSHBP01222 138 aa8.44□□□□□ -1.06
CUEDC1-203ENST00000577422 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
CUEDC1-203ENST00000577422 SLC51BQ86UW2 128 aa8.44□□□□□ -1.06
CUEDC1-203ENST00000577422 TCTE3Q8IZS6 198 aa8.44□□□□□ -1.06
CUEDC1-203ENST00000577422 I3L3M4 83 aa8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 ZNF25P17030 456 aaPredicted RBP8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 TAGLN2P37802 199 aaKnown RBP8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 XCL1P47992 114 aa8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 SRSF9Q13242 221 aaKnown RBP eCLIP8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 TEX261Q6UWH6 196 aa8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 FAM231DQ6ZW35 169 aa8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 LYPD6BQ8NI32 183 aa8.43□□□□□ -1.06
CUEDC1-203ENST00000577422 A0A0J9YXV3 536 aa8.42□□□□□ -1.06
CUEDC1-203ENST00000577422 CCL25O15444 150 aa8.42□□□□□ -1.06
CUEDC1-203ENST00000577422 POLR2KP53803 58 aaKnown RBP8.42□□□□□ -1.06
CUEDC1-203ENST00000577422 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
CUEDC1-203ENST00000577422 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms