RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 IGLV4-60A0A075B6I1 120 aa7.49□□□□□ -1.21
CDH8-202ENST00000577228 A0A1B0GUV1 79 aa7.49□□□□□ -1.21
CDH8-202ENST00000577228 SLPIP03973 132 aa7.49□□□□□ -1.21
CDH8-202ENST00000577228 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
CDH8-202ENST00000577228 FAM210AQ96ND0 272 aa7.49□□□□□ -1.21
CDH8-202ENST00000577228 GFRA4Q9GZZ7 299 aa7.49□□□□□ -1.21
CDH8-202ENST00000577228 GZMBP10144 247 aa7.48□□□□□ -1.21
CDH8-202ENST00000577228 TAGLN2P37802 199 aaKnown RBP7.48□□□□□ -1.21
CDH8-202ENST00000577228 SRSF3P84103 164 aaKnown RBP7.48□□□□□ -1.21
CDH8-202ENST00000577228 CLLU1Q5K131 121 aa7.48□□□□□ -1.21
CDH8-202ENST00000577228 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
CDH8-202ENST00000577228 FER1L6-AS1Q8NA97 138 aa7.48□□□□□ -1.21
CDH8-202ENST00000577228 C7orf33Q8WU49 177 aa7.48□□□□□ -1.21
CDH8-202ENST00000577228 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
CDH8-202ENST00000577228 PLAC8Q9NZF1 115 aa7.48□□□□□ -1.21
CDH8-202ENST00000577228 C9JQL5 133 aa7.47□□□□□ -1.21
CDH8-202ENST00000577228 PHOX2AO14813 284 aa7.47□□□□□ -1.21
CDH8-202ENST00000577228 UBE2L6O14933 153 aa7.47□□□□□ -1.21
CDH8-202ENST00000577228 PDE6DO43924 150 aa7.47□□□□□ -1.21
CDH8-202ENST00000577228 RPL35P42766 123 aaKnown RBP7.47□□□□□ -1.21
CDH8-202ENST00000577228 RAB14P61106 215 aa7.47□□□□□ -1.21
CDH8-202ENST00000577228 CACNG7P62955 275 aa7.47□□□□□ -1.21
CDH8-202ENST00000577228 RASL11AQ6T310 242 aa7.47□□□□□ -1.21
CDH8-202ENST00000577228 EIF5A2Q9GZV4 153 aaKnown RBP7.47□□□□□ -1.21
CDH8-202ENST00000577228 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
CDH8-202ENST00000577228 IGLC6P0CF74 106 aa7.46□□□□□ -1.22
CDH8-202ENST00000577228 RPS20P60866 119 aaKnown RBP7.46□□□□□ -1.22
CDH8-202ENST00000577228 CFAP161Q6P656 301 aa7.46□□□□□ -1.22
CDH8-202ENST00000577228 OR2D3Q8NGH3 330 aa7.46□□□□□ -1.22
CDH8-202ENST00000577228 PGLYRP4Q96LB8 373 aa7.46□□□□□ -1.22
CDH8-202ENST00000577228 MED9Q9NWA0 146 aa7.46□□□□□ -1.22
CDH8-202ENST00000577228 TRBV20OR9-2A0A075B6H5 130 aa7.45□□□□□ -1.22
CDH8-202ENST00000577228 GAGE12HA6NDE8 117 aa7.45□□□□□ -1.22
CDH8-202ENST00000577228 SRP19P09132 144 aaKnown RBP7.45□□□□□ -1.22
CDH8-202ENST00000577228 AMTP48728 403 aa7.45□□□□□ -1.22
CDH8-202ENST00000577228 COTL1Q14019 142 aa7.45□□□□□ -1.22
CDH8-202ENST00000577228 CENPWQ5EE01 88 aa7.45□□□□□ -1.22
CDH8-202ENST00000577228 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
CDH8-202ENST00000577228 NIT2Q9NQR4 276 aa7.45□□□□□ -1.22
CDH8-202ENST00000577228 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
CDH8-202ENST00000577228 TRGC1P0CF51 173 aa7.44□□□□□ -1.22
CDH8-202ENST00000577228 RPS10P46783 165 aaKnown RBP7.44□□□□□ -1.22
CDH8-202ENST00000577228 COX6A2Q02221 97 aa7.44□□□□□ -1.22
CDH8-202ENST00000577228 MAJINQ3KP22 176 aa7.44□□□□□ -1.22
CDH8-202ENST00000577228 GTSF1Q8WW33 167 aa7.44□□□□□ -1.22
CDH8-202ENST00000577228 IGKV2-24A0A0C4DH68 120 aa7.43□□□□□ -1.22
CDH8-202ENST00000577228 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
CDH8-202ENST00000577228 XKRY2A2RUG3 117 aa7.43□□□□□ -1.22
CDH8-202ENST00000577228 F2Z2F3 143 aa7.43□□□□□ -1.22
CDH8-202ENST00000577228 NDUFS6O75380 124 aaKnown RBP7.43□□□□□ -1.22
CDH8-202ENST00000577228 CEBPGP53567 150 aa7.43□□□□□ -1.22
CDH8-202ENST00000577228 PRR3P79522 188 aaKnown RBP7.43□□□□□ -1.22
CDH8-202ENST00000577228 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
CDH8-202ENST00000577228 LINC01600Q96MT4 127 aa7.43□□□□□ -1.22
CDH8-202ENST00000577228 C19orf71A6NCJ1 209 aa7.42□□□□□ -1.22
CDH8-202ENST00000577228 GNG4P50150 75 aa7.42□□□□□ -1.22
CDH8-202ENST00000577228 PEA15Q15121 130 aa7.42□□□□□ -1.22
CDH8-202ENST00000577228 LYZL1Q6UWQ5 148 aa7.42□□□□□ -1.22
CDH8-202ENST00000577228 PRSS3P2Q8NHM4 247 aa7.42□□□□□ -1.22
CDH8-202ENST00000577228 NTF3P20783 257 aa7.41□□□□□ -1.22
CDH8-202ENST00000577228 STPG4Q8N801 248 aa7.41□□□□□ -1.22
CDH8-202ENST00000577228 CHCHD10Q8WYQ3 142 aaPredicted RBP7.41□□□□□ -1.22
CDH8-202ENST00000577228 SMIM12Q96EX1 92 aa7.41□□□□□ -1.22
CDH8-202ENST00000577228 TNXBP22105 4242 aa7.41□□□□□ -1.22
CDH8-202ENST00000577228 GVQW2A0A096LPI5 108 aaPredicted RBP7.4□□□□□ -1.22
CDH8-202ENST00000577228 K7EN84 100 aa7.4□□□□□ -1.22
CDH8-202ENST00000577228 AMMECR1LQ6DCA0 310 aa7.4□□□□□ -1.22
CDH8-202ENST00000577228 OCC1Q8TAD7 63 aa7.4□□□□□ -1.22
CDH8-202ENST00000577228 SMIM7Q9BQ49 75 aa7.4□□□□□ -1.22
CDH8-202ENST00000577228 SMDT1Q9H4I9 107 aa7.4□□□□□ -1.22
CDH8-202ENST00000577228 LRP2P98164 4655 aa7.4□□□□□ -1.22
CDH8-202ENST00000577228 A0A0J9YXV3 536 aa7.39□□□□□ -1.23
CDH8-202ENST00000577228 LINC00862A6NCI5 91 aa7.39□□□□□ -1.23
CDH8-202ENST00000577228 ZNF727A8MUV8 499 aa7.39□□□□□ -1.23
CDH8-202ENST00000577228 ODF1Q14990 250 aa7.39□□□□□ -1.23
CDH8-202ENST00000577228 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
CDH8-202ENST00000577228 COMMD7Q86VX2 200 aa7.39□□□□□ -1.23
CDH8-202ENST00000577228 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
CDH8-202ENST00000577228 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
CDH8-202ENST00000577228 A0A096LNI7 61 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 TRAV26-2A0A0B4J265 109 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
CDH8-202ENST00000577228 NCR2O95944 276 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 CTRLP40313 264 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 TWIST1Q15672 202 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 REG3GQ6UW15 175 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 GATD1Q8NB37 220 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 LINC00474Q9P2X8 69 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 PKIGQ9Y2B9 76 aa7.38□□□□□ -1.23
CDH8-202ENST00000577228 APCSP02743 223 aa7.37□□□□□ -1.23
CDH8-202ENST00000577228 FOXI1Q12951 378 aa7.37□□□□□ -1.23
CDH8-202ENST00000577228 SPINK6Q6UWN8 80 aa7.37□□□□□ -1.23
CDH8-202ENST00000577228 LINC01551Q86U37 167 aa7.37□□□□□ -1.23
CDH8-202ENST00000577228 H7C423 109 aa7.36□□□□□ -1.23
CDH8-202ENST00000577228 FGF6P10767 208 aa7.36□□□□□ -1.23
CDH8-202ENST00000577228 FAM74A3Q4VXF1 159 aa7.36□□□□□ -1.23
CDH8-202ENST00000577228 UQCC3Q6UW78 93 aa7.36□□□□□ -1.23
CDH8-202ENST00000577228 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
CDH8-202ENST00000577228 RPL39LQ96EH5 51 aaKnown RBP7.36□□□□□ -1.23
CDH8-202ENST00000577228 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms