RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	COX6B1	P14854	86 aa		10.87	□□□□□ -0.67
PRPF8-216	ENST00000577001	DLX4	Q92988	240 aa	Predicted RBP	10.87	□□□□□ -0.67
PRPF8-216	ENST00000577001		K7EQG2	157 aa		10.87	□□□□□ -0.67
PRPF8-216	ENST00000577001	DYNLRB2	Q8TF09	96 aa		10.87	□□□□□ -0.67
PRPF8-216	ENST00000577001	LENEP	Q9Y5L5	61 aa		10.87	□□□□□ -0.67
PRPF8-216	ENST00000577001	TRAV13-1	A0A0B4J241	112 aa		10.86	□□□□□ -0.67
PRPF8-216	ENST00000577001	FAM19A4	Q96LR4	140 aa		10.86	□□□□□ -0.67
PRPF8-216	ENST00000577001	BBC3	Q96PG8	261 aa	Predicted RBP	10.86	□□□□□ -0.67
PRPF8-216	ENST00000577001		F8W1H4	67 aa		10.86	□□□□□ -0.67
PRPF8-216	ENST00000577001	ZNF22	P17026	224 aa	Predicted RBP	10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	PRO0461	Q9UI25	63 aa		10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	ADAMTSL4-AS1	Q5T5F5	129 aa		10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	C10orf126	Q8N4M7	172 aa		10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	IGLV4-3	A0A075B6K6	122 aa		10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	IGHV3-30	P01768	117 aa		10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	IGHV3-30-5	P0DP03	117 aa		10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	DGAT2L7P	Q6IED9	249 aa		10.85	□□□□□ -0.67
PRPF8-216	ENST00000577001	VWF	P04275	2813 aa		10.84	□□□□□ -0.67
PRPF8-216	ENST00000577001		Q6ZUT4	128 aa		10.84	□□□□□ -0.67
PRPF8-216	ENST00000577001	CLEC2B	Q92478	149 aa		10.84	□□□□□ -0.67
PRPF8-216	ENST00000577001	TRGV1	A0A0A0MS02	117 aa		10.84	□□□□□ -0.67
PRPF8-216	ENST00000577001	TMEM238L	A0A1B0GVL6	79 aa		10.84	□□□□□ -0.67
PRPF8-216	ENST00000577001		A6NJY4	79 aa		10.84	□□□□□ -0.67
PRPF8-216	ENST00000577001	ANKRD29	Q8N6D5	301 aa		10.83	□□□□□ -0.67
PRPF8-216	ENST00000577001	RPL35A	P18077	110 aa	Known RBP	10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001	FOXI1	Q12951	378 aa		10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001	C20orf203	Q8NBC4	194 aa		10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001	CARD19	Q96LW7	228 aa		10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001	LINC00467	Q9BRT7	94 aa		10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001		I3L3M4	83 aa		10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001		J3QR89	54 aa		10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001	IGHV3-30-3	P0DP02	117 aa		10.83	□□□□□ -0.68
PRPF8-216	ENST00000577001	RHOD	O00212	210 aa		10.82	□□□□□ -0.68
PRPF8-216	ENST00000577001		Q96MF0	132 aa		10.82	□□□□□ -0.68
PRPF8-216	ENST00000577001	C11orf68	Q9H3H3	251 aa	Known RBP	10.82	□□□□□ -0.68
PRPF8-216	ENST00000577001	PRO1854	Q9UHT4	67 aa		10.82	□□□□□ -0.68
PRPF8-216	ENST00000577001	PRSS47	A8MTI9	375 aa		10.82	□□□□□ -0.68
PRPF8-216	ENST00000577001	LINC01356	Q8N9X3	169 aa		10.82	□□□□□ -0.68
PRPF8-216	ENST00000577001	TIMM21	Q9BVV7	248 aa		10.82	□□□□□ -0.68
PRPF8-216	ENST00000577001	ATR	Q13535	2644 aa		10.81	□□□□□ -0.68
PRPF8-216	ENST00000577001	CFAP126	Q5VTH2	177 aa		10.81	□□□□□ -0.68
PRPF8-216	ENST00000577001	TRBV27	A0A0K0K1C4	114 aa		10.81	□□□□□ -0.68
PRPF8-216	ENST00000577001	XG	P55808	180 aa		10.81	□□□□□ -0.68
PRPF8-216	ENST00000577001	NTN5	Q8WTR8	489 aa	Predicted RBP	10.81	□□□□□ -0.68
PRPF8-216	ENST00000577001	C9orf85	Q96MD7	179 aa		10.81	□□□□□ -0.68
PRPF8-216	ENST00000577001	ERG28	Q9UKR5	140 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	GAGE12J	A6NER3	117 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	UBE2D1	P51668	147 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	GAGE4	Q13068	117 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	GAGE5	Q13069	117 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	TAL2	Q16559	108 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	GEMIN7	Q9H840	131 aa	Known RBP	10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	ZNF702P	Q9H963	129 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	SLC25A29	Q8N8R3	303 aa		10.8	□□□□□ -0.68
PRPF8-216	ENST00000577001	TEX49	A0A1B0GTD5	131 aa		10.79	□□□□□ -0.68
PRPF8-216	ENST00000577001	LGALS9	O00182	355 aa		10.79	□□□□□ -0.68
PRPF8-216	ENST00000577001	TOMM7	Q9P0U1	55 aa		10.79	□□□□□ -0.68
PRPF8-216	ENST00000577001	CDKN2A-AS1	Q9UH64	79 aa		10.79	□□□□□ -0.68
PRPF8-216	ENST00000577001	NDUFA12	Q9UI09	145 aa		10.79	□□□□□ -0.68
PRPF8-216	ENST00000577001	LOC100131303	A0A0U1RQF7	123 aa		10.79	□□□□□ -0.68
PRPF8-216	ENST00000577001	VPREB3	Q9UKI3	123 aa		10.79	□□□□□ -0.68
PRPF8-216	ENST00000577001		A0A096LPF7	62 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001		A0A0J9YXY3	114 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	PPP1R17	O96001	155 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	LINC00694	P0DN24	101 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	AMELX	Q99217	191 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	TMEM223	A0PJW6	202 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001		A8MWV9	139 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	COX6A2	Q02221	97 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	C3orf56	Q8N813	242 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001		H3BMM0	161 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	TENM4	Q6N022	2769 aa		10.78	□□□□□ -0.68
PRPF8-216	ENST00000577001	CKS1B	P61024	79 aa		10.77	□□□□□ -0.68
PRPF8-216	ENST00000577001	POM121L12	Q8N7R1	296 aa		10.77	□□□□□ -0.68
PRPF8-216	ENST00000577001	TMEM141	Q96I45	108 aa		10.77	□□□□□ -0.68
PRPF8-216	ENST00000577001	C1QTNF4	Q9BXJ3	329 aa		10.77	□□□□□ -0.68
PRPF8-216	ENST00000577001	TRBV20-1	A0A075B6N2	111 aa		10.77	□□□□□ -0.69
PRPF8-216	ENST00000577001	SLC25A20	O43772	301 aa		10.77	□□□□□ -0.69
PRPF8-216	ENST00000577001	GATA3	P23771	443 aa		10.76	□□□□□ -0.69
PRPF8-216	ENST00000577001		Q6ZTI0	123 aa		10.76	□□□□□ -0.69
PRPF8-216	ENST00000577001	TIMM17A	Q99595	171 aa		10.76	□□□□□ -0.69
PRPF8-216	ENST00000577001		K7EMT4	169 aa		10.76	□□□□□ -0.69
PRPF8-216	ENST00000577001	WFDC11	Q8NEX6	87 aa		10.76	□□□□□ -0.69
PRPF8-216	ENST00000577001	CDIP1	Q9H305	208 aa		10.75	□□□□□ -0.69
PRPF8-216	ENST00000577001	ESM1	Q9NQ30	184 aa		10.75	□□□□□ -0.69
PRPF8-216	ENST00000577001	TRIAP1	O43715	76 aa		10.75	□□□□□ -0.69
PRPF8-216	ENST00000577001	IGHV3-33	P01772	117 aa		10.75	□□□□□ -0.69
PRPF8-216	ENST00000577001	CLUHP3	Q96NS8	147 aa		10.75	□□□□□ -0.69
PRPF8-216	ENST00000577001	MAP6D1	Q9H9H5	199 aa		10.75	□□□□□ -0.69
PRPF8-216	ENST00000577001	NOP10	Q9NPE3	64 aa	Known RBP	10.75	□□□□□ -0.69
PRPF8-216	ENST00000577001		H3BUA1	57 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	CLPSL2	Q6UWE3	100 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	GAGE7	O76087	117 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	NXPH4	O95158	308 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	GAGE12F	P0CL80	117 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	GAGE12G	P0CL81	117 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	GAGE12I	P0CL82	117 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	IGHV4-31	P0DP07	118 aa		10.74	□□□□□ -0.69
PRPF8-216	ENST00000577001	FAM104A	Q969W3	186 aa		10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms