RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 NTF3P20783 257 aa7.55□□□□□ -1.2
PRPF8-215ENST00000576958 PKIAP61925 76 aa7.55□□□□□ -1.2
PRPF8-215ENST00000576958 ZNF345Q14585 488 aa7.55□□□□□ -1.2
PRPF8-215ENST00000576958 TMEM97Q5BJF2 176 aa7.55□□□□□ -1.2
PRPF8-215ENST00000576958 Q6ZRU5 148 aa7.55□□□□□ -1.2
PRPF8-215ENST00000576958 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.55□□□□□ -1.2
PRPF8-215ENST00000576958 CLRN3Q8NCR9 226 aa7.55□□□□□ -1.2
PRPF8-215ENST00000576958 A0A0D9SG52 128 aa7.54□□□□□ -1.2
PRPF8-215ENST00000576958 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
PRPF8-215ENST00000576958 UMAD1C9J7I0 102 aa7.54□□□□□ -1.2
PRPF8-215ENST00000576958 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
PRPF8-215ENST00000576958 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
PRPF8-215ENST00000576958 A0A096LNI7 61 aa7.53□□□□□ -1.2
PRPF8-215ENST00000576958 AMTP48728 403 aa7.53□□□□□ -1.2
PRPF8-215ENST00000576958 SULT1A2P50226 295 aa7.53□□□□□ -1.2
PRPF8-215ENST00000576958 RGS21Q2M5E4 152 aa7.53□□□□□ -1.2
PRPF8-215ENST00000576958 MAJINQ3KP22 176 aa7.53□□□□□ -1.2
PRPF8-215ENST00000576958 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
PRPF8-215ENST00000576958 BATF3Q9NR55 127 aa7.53□□□□□ -1.2
PRPF8-215ENST00000576958 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 K7EN84 100 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 P01737 135 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 CACNG7P62955 275 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 PRR3P79522 188 aaKnown RBP7.52□□□□□ -1.21
PRPF8-215ENST00000576958 NUDT10Q8NFP7 164 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 GTSF1Q8WW33 167 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
PRPF8-215ENST00000576958 NUDT11Q96G61 164 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 PGLYRP4Q96LB8 373 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 RNASE7Q9H1E1 156 aaKnown RBP7.52□□□□□ -1.21
PRPF8-215ENST00000576958 DPH3P1Q9H4G8 78 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.21
PRPF8-215ENST00000576958 LPAP08519 4548 aa7.51□□□□□ -1.21
PRPF8-215ENST00000576958 KANTRA0A1W2PQU2 76 aa7.51□□□□□ -1.21
PRPF8-215ENST00000576958 CTRLP40313 264 aa7.51□□□□□ -1.21
PRPF8-215ENST00000576958 GNG4P50150 75 aa7.51□□□□□ -1.21
PRPF8-215ENST00000576958 MANBALQ9NQG1 85 aa7.51□□□□□ -1.21
PRPF8-215ENST00000576958 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-215ENST00000576958 HMSDA8MTL9 139 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 H7C1H1 209 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 UBE2L6O14933 153 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 IFNA1P01562 189 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 RPS20P60866 119 aaKnown RBP7.5□□□□□ -1.21
PRPF8-215ENST00000576958 FOXI1Q12951 378 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 COTL1Q14019 142 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 TWIST1Q15672 202 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 STPG4Q8N801 248 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 MED9Q9NWA0 146 aa7.5□□□□□ -1.21
PRPF8-215ENST00000576958 FAM231BA6NCW3 169 aa7.49□□□□□ -1.21
PRPF8-215ENST00000576958 RPS10P46783 165 aaKnown RBP7.49□□□□□ -1.21
PRPF8-215ENST00000576958 RNF185Q96GF1 192 aa7.49□□□□□ -1.21
PRPF8-215ENST00000576958 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
PRPF8-215ENST00000576958 GVQW2A0A096LPI5 108 aaPredicted RBP7.48□□□□□ -1.21
PRPF8-215ENST00000576958 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
PRPF8-215ENST00000576958 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
PRPF8-215ENST00000576958 TRGC1P0CF51 173 aa7.48□□□□□ -1.21
PRPF8-215ENST00000576958 FGF6P10767 208 aa7.48□□□□□ -1.21
PRPF8-215ENST00000576958 XCL1P47992 114 aa7.48□□□□□ -1.21
PRPF8-215ENST00000576958 MEF2BQ02080 365 aaPredicted RBP7.48□□□□□ -1.21
PRPF8-215ENST00000576958 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
PRPF8-215ENST00000576958 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
PRPF8-215ENST00000576958 C9orf62Q8N4C0 152 aa7.48□□□□□ -1.21
PRPF8-215ENST00000576958 F2Z2F3 143 aa7.47□□□□□ -1.21
PRPF8-215ENST00000576958 OCC1Q8TAD7 63 aa7.47□□□□□ -1.21
PRPF8-215ENST00000576958 C7orf33Q8WU49 177 aa7.47□□□□□ -1.21
PRPF8-215ENST00000576958 RPP21Q9H633 154 aaKnown RBP7.47□□□□□ -1.21
PRPF8-215ENST00000576958 BCL2P10415 239 aa7.46□□□□□ -1.22
PRPF8-215ENST00000576958 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
PRPF8-215ENST00000576958 AMMECR1LQ6DCA0 310 aa7.46□□□□□ -1.22
PRPF8-215ENST00000576958 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
PRPF8-215ENST00000576958 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
PRPF8-215ENST00000576958 CCL25O15444 150 aa7.45□□□□□ -1.22
PRPF8-215ENST00000576958 TSHBP01222 138 aa7.45□□□□□ -1.22
PRPF8-215ENST00000576958 TMEM242Q9NWH2 141 aa7.45□□□□□ -1.22
PRPF8-215ENST00000576958 A0A0J9YXV3 536 aa7.44□□□□□ -1.22
PRPF8-215ENST00000576958 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
PRPF8-215ENST00000576958 APCSP02743 223 aa7.44□□□□□ -1.22
PRPF8-215ENST00000576958 RNASE13Q5GAN3 156 aaKnown RBP7.44□□□□□ -1.22
PRPF8-215ENST00000576958 A0A1W2PNN7 141 aa7.43□□□□□ -1.22
PRPF8-215ENST00000576958 XKRY2A2RUG3 117 aa7.43□□□□□ -1.22
PRPF8-215ENST00000576958 SMKR1H3BMG3 65 aa7.43□□□□□ -1.22
PRPF8-215ENST00000576958 PDE6DO43924 150 aa7.43□□□□□ -1.22
PRPF8-215ENST00000576958 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
PRPF8-215ENST00000576958 CFAP161Q6P656 301 aa7.43□□□□□ -1.22
PRPF8-215ENST00000576958 SMIM12Q96EX1 92 aa7.43□□□□□ -1.22
PRPF8-215ENST00000576958 ESDP10768 282 aa7.42□□□□□ -1.22
PRPF8-215ENST00000576958 OR5A1Q8NGJ0 315 aa7.42□□□□□ -1.22
PRPF8-215ENST00000576958 CARD19Q96LW7 228 aa7.42□□□□□ -1.22
PRPF8-215ENST00000576958 NCR2O95944 276 aa7.41□□□□□ -1.22
PRPF8-215ENST00000576958 EIF5AP63241 154 aaKnown RBP7.41□□□□□ -1.22
PRPF8-215ENST00000576958 PMCHP20382 165 aa7.4□□□□□ -1.22
PRPF8-215ENST00000576958 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
PRPF8-215ENST00000576958 KRTAP11-1Q8IUC1 163 aa7.4□□□□□ -1.22
PRPF8-215ENST00000576958 IGLV4-69A0A075B6H9 119 aa7.39□□□□□ -1.23
PRPF8-215ENST00000576958 IGHV1-58A0A0C4DH39 117 aa7.39□□□□□ -1.23
PRPF8-215ENST00000576958 I3L3M4 83 aa7.39□□□□□ -1.23
PRPF8-215ENST00000576958 GATCO43716 136 aaKnown RBP7.39□□□□□ -1.23
PRPF8-215ENST00000576958 CEBPGP53567 150 aa7.39□□□□□ -1.23
PRPF8-215ENST00000576958 PTTG1IPP53801 180 aa7.39□□□□□ -1.23
PRPF8-215ENST00000576958 SYCNQ0VAF6 134 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 220.4 ms