RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 UFSP1Q6NVU6 142 aa4.1□□□□□ -1.75
NUP88-212ENST00000576708 PSMG3Q9BT73 122 aaPredicted RBP4.1□□□□□ -1.75
NUP88-212ENST00000576708 TMEM70Q9BUB7 260 aa4.1□□□□□ -1.75
NUP88-212ENST00000576708 TMEM167BQ9NRX6 74 aa4.1□□□□□ -1.75
NUP88-212ENST00000576708 ARL2-SNX15V9GYD0 113 aa4.1□□□□□ -1.75
NUP88-212ENST00000576708 IGLV5-37A0A075B6J1 123 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 TMSB15BA0A087X1C1 80 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 FABP5P3A8MUU1 101 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 B4DEV8 164 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 H3BVH4 76 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 PEX7O00628 323 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 IFNA7P01567 189 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 ARMS2P0C7Q2 107 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 ASIPP42127 132 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 RPL35P42766 123 aaKnown RBP4.09□□□□□ -1.75
NUP88-212ENST00000576708 SERF2P84101 59 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 Q86TA4 180 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 LYPD6BQ8NI32 183 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 ZC2HC1AQ96GY0 325 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 MED28Q9H204 178 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 TNFSF18Q9UNG2 199 aa4.09□□□□□ -1.75
NUP88-212ENST00000576708 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
NUP88-212ENST00000576708 FXYD6-FXYD2A0A087WZ82 144 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 CTXND1A0A1B0GTU2 59 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 A0A1W2PRE2 83 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 FAM74A7A6NL05 159 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 A8MWV9 139 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 KRBOX1C9JBD0 128 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 SH2D1AO60880 128 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 AKR1D1P51857 326 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 LAGE3Q14657 143 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
NUP88-212ENST00000576708 DNLZQ5SXM8 178 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 FAM74A4Q5TZK3 123 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 ZFP2Q6ZN57 461 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 BIN3Q9NQY0 253 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 IL36BQ9NZH7 164 aa4.08□□□□□ -1.76
NUP88-212ENST00000576708 IGKV2D-24A0A075B6R9 120 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 TRAV8-3A0A0A6YYJ7 113 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 BORCS7-ASMTA0A0B4J1R7 106 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 G3V3Q6 166 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 M0R381 172 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 OXTP01178 125 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 AKR1C3P42330 323 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 ATRAIDQ6UW56 229 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 Q6ZSA8 131 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 NIT1Q86X76 327 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 OR11H4Q8NGC9 324 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 KLK12Q9UKR0 248 aa4.07□□□□□ -1.76
NUP88-212ENST00000576708 DMBT1Q9UGM3 2413 aaPredicted RBP4.06□□□□□ -1.76
NUP88-212ENST00000576708 A0A087WWC5 75 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 MUC21A0A0G2JKD1 596 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 MUC21A0A140T8X8 626 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 A0A1B0GV50 99 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 MAP1LC3B2A6NCE7 125 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 RBFOX3A6NFN3 312 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 PTTG1O95997 202 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 C1QBP02746 253 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 GIPP09681 153 aaPredicted RBP4.06□□□□□ -1.76
NUP88-212ENST00000576708 ZNF25P17030 456 aaPredicted RBP4.06□□□□□ -1.76
NUP88-212ENST00000576708 SEC61BP60468 96 aaKnown RBP4.06□□□□□ -1.76
NUP88-212ENST00000576708 SNRPEP62304 92 aaKnown RBP4.06□□□□□ -1.76
NUP88-212ENST00000576708 AKR1C8PQ5T2L2 129 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 SCXQ7RTU7 201 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 UBE2WQ96B02 151 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 MAP1LC3BQ9GZQ8 125 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 NIT2Q9NQR4 276 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 CYTL1Q9NRR1 136 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 PHLDA3Q9Y5J5 127 aa4.06□□□□□ -1.76
NUP88-212ENST00000576708 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 TPT1P13693 172 aaKnown RBP4.05□□□□□ -1.76
NUP88-212ENST00000576708 UBE2D3P61077 147 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 UBE2G1P62253 170 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 UBE2D2P62837 147 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 FAM162BQ5T6X4 162 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 COX8CQ7Z4L0 72 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 FAM19A1Q7Z5A9 133 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 MRPL52Q86TS9 123 aaKnown RBP4.05□□□□□ -1.76
NUP88-212ENST00000576708 SMIM20Q8N5G0 67 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 HIST1H2BAQ96A08 127 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 ZFP30Q9Y2G7 519 aa4.05□□□□□ -1.76
NUP88-212ENST00000576708 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
NUP88-212ENST00000576708 A0A087WX48 190 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 TRBV6-1A0A0K0K1D8 114 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 TINCRA0A1B0GVN0 87 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 TMEM262E9PQX1 116 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 LTAP01374 205 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 RPL13AP40429 203 aaKnown RBP4.04□□□□□ -1.76
NUP88-212ENST00000576708 KRTAP10-4P60372 401 aaPredicted RBP4.04□□□□□ -1.76
NUP88-212ENST00000576708 UBE2V1Q13404 147 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 TAL2Q16559 108 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 ENHOQ6UWT2 76 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 Q8N976 141 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 OR10AG1Q8NH19 301 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 CIRBP-AS1Q8TBR5 109 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 FMC1Q96HJ9 113 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
NUP88-212ENST00000576708 NKX6-2Q9C056 277 aaPredicted RBP4.04□□□□□ -1.76
NUP88-212ENST00000576708 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms