RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 KIF25-AS1Q9Y6Z4 181 aa9.05□□□□□ -0.96
RPAIN-216ENST00000575599 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
RPAIN-216ENST00000575599 D6R8Y8 96 aa9.04□□□□□ -0.96
RPAIN-216ENST00000575599 PPP1R17O96001 155 aa9.04□□□□□ -0.96
RPAIN-216ENST00000575599 ATP6V0E2Q8NHE4 81 aa9.04□□□□□ -0.96
RPAIN-216ENST00000575599 RNF185Q96GF1 192 aa9.04□□□□□ -0.96
RPAIN-216ENST00000575599 NCR2O95944 276 aa9.03□□□□□ -0.96
RPAIN-216ENST00000575599 LINC00315P59091 139 aa9.03□□□□□ -0.96
RPAIN-216ENST00000575599 RAB5BP61020 215 aa9.03□□□□□ -0.96
RPAIN-216ENST00000575599 OR10J3Q5JRS4 329 aa9.03□□□□□ -0.96
RPAIN-216ENST00000575599 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
RPAIN-216ENST00000575599 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
RPAIN-216ENST00000575599 Q9UF83 564 aa9.03□□□□□ -0.96
RPAIN-216ENST00000575599 TRAV26-2A0A0B4J265 109 aa9.02□□□□□ -0.97
RPAIN-216ENST00000575599 SMKR1H3BMG3 65 aa9.02□□□□□ -0.97
RPAIN-216ENST00000575599 TIRAPP58753 221 aa9.02□□□□□ -0.97
RPAIN-216ENST00000575599 GTSF1LQ9H1H1 148 aa9.02□□□□□ -0.97
RPAIN-216ENST00000575599 TRAV9-2A0A087WT02 112 aa9.01□□□□□ -0.97
RPAIN-216ENST00000575599 TRAV8-6A0A0B4J262 113 aa9.01□□□□□ -0.97
RPAIN-216ENST00000575599 LINC00694P0DN24 101 aa9.01□□□□□ -0.97
RPAIN-216ENST00000575599 KRTAP4-2Q9BYR5 136 aa9.01□□□□□ -0.97
RPAIN-216ENST00000575599 LAMTOR2Q9Y2Q5 125 aa9.01□□□□□ -0.97
RPAIN-216ENST00000575599 IGHV3-38A0A0C4DH36 116 aa9□□□□□ -0.97
RPAIN-216ENST00000575599 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
RPAIN-216ENST00000575599 DNAH10OSP0CZ25 163 aa9□□□□□ -0.97
RPAIN-216ENST00000575599 LELP1Q5T871 98 aa9□□□□□ -0.97
RPAIN-216ENST00000575599 ALKBH7Q9BT30 221 aaPredicted RBP9□□□□□ -0.97
RPAIN-216ENST00000575599 TNFRSF18Q9Y5U5 241 aa9□□□□□ -0.97
RPAIN-216ENST00000575599 M0QY20 66 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 MAP1LC3AQ9H492 121 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 ST20Q9HBF5 79 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 NIT2Q9NQR4 276 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 TRBV10-1A0A0K0K1A3 114 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 PHOX2AO14813 284 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 BTF3P20290 206 aaKnown RBP8.99□□□□□ -0.97
RPAIN-216ENST00000575599 RPL36AP83881 106 aaKnown RBP8.99□□□□□ -0.97
RPAIN-216ENST00000575599 BAGE3Q86Y29 109 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 RPL36ALQ969Q0 106 aaKnown RBP8.99□□□□□ -0.97
RPAIN-216ENST00000575599 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
RPAIN-216ENST00000575599 DNAJC30Q96LL9 226 aa8.99□□□□□ -0.97
RPAIN-216ENST00000575599 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 LOC389332A0A1B0GUA5 103 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 NPYP01303 97 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 IGHV3-30P01768 117 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 IGHV3-33P01772 117 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 IGHV3-30-5P0DP03 117 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 C10orf126Q8N4M7 172 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 PRSS3P2Q8NHM4 247 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 C20orf78Q9BR46 151 aa8.98□□□□□ -0.97
RPAIN-216ENST00000575599 TRBV7-3A0A075B6L6 115 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 K7EP13 123 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 GAS8-AS1O95177 125 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 S100A6P06703 90 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BJP06899 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BOP23527 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BBP33778 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BDP58876 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 SUMO2P61956 95 aaKnown RBP8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BCP62807 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST2H2BEQ16778 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.97□□□□□ -0.97
RPAIN-216ENST00000575599 NRACQ8N912 160 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 NEXN-AS1Q8NBZ9 246 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BHQ93079 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BNQ99877 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 HIST1H2BMQ99879 126 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 TMA7Q9Y2S6 64 aaKnown RBP8.97□□□□□ -0.97
RPAIN-216ENST00000575599 PKD1P98161 4303 aa8.97□□□□□ -0.97
RPAIN-216ENST00000575599 PMCHP20382 165 aa8.96□□□□□ -0.98
RPAIN-216ENST00000575599 UBE2D3P61077 147 aa8.96□□□□□ -0.98
RPAIN-216ENST00000575599 UBE2D2P62837 147 aa8.96□□□□□ -0.98
RPAIN-216ENST00000575599 Q6ZRN7 208 aaPredicted RBP8.96□□□□□ -0.98
RPAIN-216ENST00000575599 FA2HQ7L5A8 372 aa8.96□□□□□ -0.98
RPAIN-216ENST00000575599 NFE4Q86UQ8 179 aa8.96□□□□□ -0.98
RPAIN-216ENST00000575599 C18orf32Q8TCD1 76 aa8.96□□□□□ -0.98
RPAIN-216ENST00000575599 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
RPAIN-216ENST00000575599 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
RPAIN-216ENST00000575599 VCYO14598 125 aa8.95□□□□□ -0.98
RPAIN-216ENST00000575599 NDUFA6P56556 154 aa8.95□□□□□ -0.98
RPAIN-216ENST00000575599 Q0VG73 95 aa8.95□□□□□ -0.98
RPAIN-216ENST00000575599 IQCJQ1A5X6 159 aa8.95□□□□□ -0.98
RPAIN-216ENST00000575599 NXT2Q9NPJ8 142 aaKnown RBP8.95□□□□□ -0.98
RPAIN-216ENST00000575599 DYNC1H1Q14204 4646 aaKnown RBP8.95□□□□□ -0.98
RPAIN-216ENST00000575599 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
RPAIN-216ENST00000575599 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
RPAIN-216ENST00000575599 Q9HAA7 133 aa8.94□□□□□ -0.98
RPAIN-216ENST00000575599 FCER1GP30273 86 aa8.93□□□□□ -0.98
RPAIN-216ENST00000575599 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
RPAIN-216ENST00000575599 RNASEKQ6P5S7 137 aaKnown RBP8.93□□□□□ -0.98
RPAIN-216ENST00000575599 SPATA12Q7Z6I5 190 aa8.93□□□□□ -0.98
RPAIN-216ENST00000575599 NIT1Q86X76 327 aa8.93□□□□□ -0.98
RPAIN-216ENST00000575599 Q8N8P6 123 aa8.93□□□□□ -0.98
RPAIN-216ENST00000575599 SMIM2Q9BVW6 85 aa8.93□□□□□ -0.98
RPAIN-216ENST00000575599 PRSS47A8MTI9 375 aa8.92□□□□□ -0.98
RPAIN-216ENST00000575599 C16orf90A8MZG2 172 aa8.92□□□□□ -0.98
RPAIN-216ENST00000575599 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms