RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 F2Z2F3 143 aa6.65□□□□□ -1.34
TVP23B-208ENST00000575261 TRGC1P0CF51 173 aa6.65□□□□□ -1.34
TVP23B-208ENST00000575261 EIF5AP63241 154 aaKnown RBP6.65□□□□□ -1.34
TVP23B-208ENST00000575261 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.34
TVP23B-208ENST00000575261 SMIM12Q96EX1 92 aa6.65□□□□□ -1.34
TVP23B-208ENST00000575261 GNG13Q9P2W3 67 aa6.65□□□□□ -1.34
TVP23B-208ENST00000575261 A0A087WYN8 130 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 CHTF8P0CG12 524 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 AMTP48728 403 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 SULT1A2P50226 295 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 RAB5CP51148 216 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 DPH3Q96FX2 82 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 GFRA4Q9GZZ7 299 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 DPH3P1Q9H4G8 78 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 NIT2Q9NQR4 276 aa6.64□□□□□ -1.35
TVP23B-208ENST00000575261 C19orf71A6NCJ1 209 aa6.63□□□□□ -1.35
TVP23B-208ENST00000575261 SLPIP03973 132 aa6.63□□□□□ -1.35
TVP23B-208ENST00000575261 GNG4P50150 75 aa6.63□□□□□ -1.35
TVP23B-208ENST00000575261 CCL20P78556 96 aa6.63□□□□□ -1.35
TVP23B-208ENST00000575261 COTL1Q14019 142 aa6.63□□□□□ -1.35
TVP23B-208ENST00000575261 C7orf33Q8WU49 177 aa6.63□□□□□ -1.35
TVP23B-208ENST00000575261 TEX46H3BTG2 121 aa6.62□□□□□ -1.35
TVP23B-208ENST00000575261 IFNA1P01562 189 aa6.62□□□□□ -1.35
TVP23B-208ENST00000575261 CFAP161Q6P656 301 aa6.62□□□□□ -1.35
TVP23B-208ENST00000575261 C15orf56Q8N910 161 aa6.62□□□□□ -1.35
TVP23B-208ENST00000575261 BIN3Q9NQY0 253 aa6.62□□□□□ -1.35
TVP23B-208ENST00000575261 PLAC8Q9NZF1 115 aa6.62□□□□□ -1.35
TVP23B-208ENST00000575261 LRP2P98164 4655 aa6.61□□□□□ -1.35
TVP23B-208ENST00000575261 TRAV1-1A0A0B4J248 108 aa6.61□□□□□ -1.35
TVP23B-208ENST00000575261 PHOX2AO14813 284 aa6.61□□□□□ -1.35
TVP23B-208ENST00000575261 PDE6DO43924 150 aa6.61□□□□□ -1.35
TVP23B-208ENST00000575261 NTF3P20783 257 aa6.61□□□□□ -1.35
TVP23B-208ENST00000575261 CTRLP40313 264 aa6.61□□□□□ -1.35
TVP23B-208ENST00000575261 MEF2BQ02080 365 aaPredicted RBP6.61□□□□□ -1.35
TVP23B-208ENST00000575261 LYZL1Q6UWQ5 148 aa6.61□□□□□ -1.35
TVP23B-208ENST00000575261 TRBV20OR9-2A0A075B6H5 130 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 IGKV3OR2-268A0A0C4DH90 116 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 RAB19A4D1S5 217 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 NDUFS6O75380 124 aaKnown RBP6.6□□□□□ -1.35
TVP23B-208ENST00000575261 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
TVP23B-208ENST00000575261 COX6A2Q02221 97 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 AKAP14Q86UN6 197 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 C9orf62Q8N4C0 152 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
TVP23B-208ENST00000575261 IGKV2-24A0A0C4DH68 120 aa6.59□□□□□ -1.35
TVP23B-208ENST00000575261 TWIST1Q15672 202 aa6.59□□□□□ -1.35
TVP23B-208ENST00000575261 HIGD2BQ4VC39 106 aa6.59□□□□□ -1.35
TVP23B-208ENST00000575261 AMMECR1LQ6DCA0 310 aa6.59□□□□□ -1.35
TVP23B-208ENST00000575261 EIF5AL1Q6IS14 154 aaKnown RBP6.59□□□□□ -1.35
TVP23B-208ENST00000575261 MED9Q9NWA0 146 aa6.59□□□□□ -1.35
TVP23B-208ENST00000575261 GVQW2A0A096LPI5 108 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-208ENST00000575261 TRAV26-2A0A0B4J265 109 aa6.58□□□□□ -1.36
TVP23B-208ENST00000575261 NCR2O95944 276 aa6.58□□□□□ -1.36
TVP23B-208ENST00000575261 PRR3P79522 188 aaKnown RBP6.58□□□□□ -1.36
TVP23B-208ENST00000575261 MAJINQ3KP22 176 aa6.58□□□□□ -1.36
TVP23B-208ENST00000575261 GATD1Q8NB37 220 aa6.58□□□□□ -1.36
TVP23B-208ENST00000575261 GTSF1Q8WW33 167 aa6.58□□□□□ -1.36
TVP23B-208ENST00000575261 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
TVP23B-208ENST00000575261 H7C423 109 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 APCSP02743 223 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 BCL2P10415 239 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 RNASEKQ6P5S7 137 aaKnown RBP6.57□□□□□ -1.36
TVP23B-208ENST00000575261 SMIM15Q7Z3B0 74 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 STPG4Q8N801 248 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 PRSS3P2Q8NHM4 247 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 RPP21Q9H633 154 aaKnown RBP6.57□□□□□ -1.36
TVP23B-208ENST00000575261 PKIGQ9Y2B9 76 aa6.57□□□□□ -1.36
TVP23B-208ENST00000575261 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-208ENST00000575261 IGKV2-29A2NJV5 120 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-208ENST00000575261 ZNF25P17030 456 aaPredicted RBP6.56□□□□□ -1.36
TVP23B-208ENST00000575261 TEX261Q6UWH6 196 aa6.56□□□□□ -1.36
TVP23B-208ENST00000575261 RPL39LQ96EH5 51 aaKnown RBP6.56□□□□□ -1.36
TVP23B-208ENST00000575261 LINC01600Q96MT4 127 aa6.56□□□□□ -1.36
TVP23B-208ENST00000575261 LINC00474Q9P2X8 69 aa6.56□□□□□ -1.36
TVP23B-208ENST00000575261 A0A096LNI7 61 aa6.55□□□□□ -1.36
TVP23B-208ENST00000575261 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
TVP23B-208ENST00000575261 FGF6P10767 208 aa6.55□□□□□ -1.36
TVP23B-208ENST00000575261 TAGLN2P37802 199 aaKnown RBP6.55□□□□□ -1.36
TVP23B-208ENST00000575261 FOXI1Q12951 378 aa6.55□□□□□ -1.36
TVP23B-208ENST00000575261 OR5A1Q8NGJ0 315 aa6.55□□□□□ -1.36
TVP23B-208ENST00000575261 BTF3L4Q96K17 158 aa6.55□□□□□ -1.36
TVP23B-208ENST00000575261 RNASE7Q9H1E1 156 aaKnown RBP6.55□□□□□ -1.36
TVP23B-208ENST00000575261 K7EN84 100 aa6.54□□□□□ -1.36
TVP23B-208ENST00000575261 XCL1P47992 114 aa6.54□□□□□ -1.36
TVP23B-208ENST00000575261 LYPD6BQ8NI32 183 aa6.54□□□□□ -1.36
TVP23B-208ENST00000575261 TMEM101Q96IK0 257 aa6.54□□□□□ -1.36
TVP23B-208ENST00000575261 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
TVP23B-208ENST00000575261 I3L3M4 83 aa6.53□□□□□ -1.36
TVP23B-208ENST00000575261 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
TVP23B-208ENST00000575261 REG3GQ6UW15 175 aa6.53□□□□□ -1.36
TVP23B-208ENST00000575261 CARD19Q96LW7 228 aa6.53□□□□□ -1.36
TVP23B-208ENST00000575261 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
TVP23B-208ENST00000575261 A0A0J9YXV3 536 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 TRBV6-5A0A0K0K1A5 114 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 CCL25O15444 150 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 PMCHP20382 165 aa6.52□□□□□ -1.37
TVP23B-208ENST00000575261 FOXA3P55318 350 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 1346.7 ms