RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 GIG44P09565 113 aaPredicted RBP13.49□□□□□ -0.25
SPNS3-204ENST00000575194 C9orf66Q5T8R8 295 aa13.49□□□□□ -0.25
SPNS3-204ENST00000575194 OR11H2Q8NH07 326 aa13.49□□□□□ -0.25
SPNS3-204ENST00000575194 NACAE9PAV3 2078 aa13.48□□□□□ -0.25
SPNS3-204ENST00000575194 NPSP0C0P6 89 aa13.48□□□□□ -0.25
SPNS3-204ENST00000575194 P0DMU3 169 aa13.48□□□□□ -0.25
SPNS3-204ENST00000575194 FAM231AP0DMU4 169 aa13.48□□□□□ -0.25
SPNS3-204ENST00000575194 FAM231CP0DMU5 169 aa13.48□□□□□ -0.25
SPNS3-204ENST00000575194 HERVK_113P61574 105 aa13.48□□□□□ -0.25
SPNS3-204ENST00000575194 DAZ2Q13117 558 aaKnown RBP13.48□□□□□ -0.25
SPNS3-204ENST00000575194 DEFB104AQ8WTQ1 72 aa13.48□□□□□ -0.25
SPNS3-204ENST00000575194 TRAV4A0A0B4J268 109 aa13.47□□□□□ -0.25
SPNS3-204ENST00000575194 Q6ZSN1 163 aa13.47□□□□□ -0.25
SPNS3-204ENST00000575194 ORAOV1Q8WV07 137 aa13.47□□□□□ -0.25
SPNS3-204ENST00000575194 E9PLD3 99 aa13.47□□□□□ -0.25
SPNS3-204ENST00000575194 GAGE1Q13065 139 aa13.47□□□□□ -0.25
SPNS3-204ENST00000575194 PYGO1Q9Y3Y4 419 aa13.47□□□□□ -0.25
SPNS3-204ENST00000575194 COX11Q9Y6N1 276 aa13.47□□□□□ -0.25
SPNS3-204ENST00000575194 IGLV4-69A0A075B6H9 119 aa13.46□□□□□ -0.25
SPNS3-204ENST00000575194 A6NDN8 102 aa13.46□□□□□ -0.25
SPNS3-204ENST00000575194 KRTAP21-3Q3LHN1 58 aa13.46□□□□□ -0.25
SPNS3-204ENST00000575194 SPATA3Q8NHX4 192 aa13.46□□□□□ -0.25
SPNS3-204ENST00000575194 TRAV8-6A0A0B4J262 113 aa13.45□□□□□ -0.26
SPNS3-204ENST00000575194 CIDEAO60543 219 aa13.45□□□□□ -0.26
SPNS3-204ENST00000575194 CRYBA4P53673 196 aa13.45□□□□□ -0.26
SPNS3-204ENST00000575194 RRN3P1Q2M238 152 aa13.45□□□□□ -0.26
SPNS3-204ENST00000575194 CHAC1Q9BUX1 264 aa13.45□□□□□ -0.26
SPNS3-204ENST00000575194 TRBV25-1A0A075B6N4 114 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 TRBV10-1A0A0K0K1A3 114 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 CSNK1G2-AS1Q8NCQ2 148 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 WFDC9Q8NEX5 89 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 CMYA5Q8N3K9 4069 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 C11orf86A6NJI1 115 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 COTL1Q14019 142 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 Q6ZTI0 123 aa13.44□□□□□ -0.26
SPNS3-204ENST00000575194 IGLV4-3A0A075B6K6 122 aa13.43□□□□□ -0.26
SPNS3-204ENST00000575194 NFE4Q86UQ8 179 aa13.43□□□□□ -0.26
SPNS3-204ENST00000575194 VCX2Q9H322 139 aa13.43□□□□□ -0.26
SPNS3-204ENST00000575194 NOP10Q9NPE3 64 aaKnown RBP13.43□□□□□ -0.26
SPNS3-204ENST00000575194 SPANXA1Q9NS26 97 aa13.43□□□□□ -0.26
SPNS3-204ENST00000575194 MYMXA0A1B0GTQ4 84 aa13.42□□□□□ -0.26
SPNS3-204ENST00000575194 K7EQD1 137 aa13.42□□□□□ -0.26
SPNS3-204ENST00000575194 OVOL2Q9BRP0 275 aa13.42□□□□□ -0.26
SPNS3-204ENST00000575194 PRADC1Q9BSG0 188 aa13.42□□□□□ -0.26
SPNS3-204ENST00000575194 TTTY13Q9BZ97 58 aa13.42□□□□□ -0.26
SPNS3-204ENST00000575194 TAX1BP3O14907 124 aa13.42□□□□□ -0.26
SPNS3-204ENST00000575194 RPL36AP83881 106 aaKnown RBP13.42□□□□□ -0.26
SPNS3-204ENST00000575194 TAL2Q16559 108 aa13.42□□□□□ -0.26
SPNS3-204ENST00000575194 RPL36ALQ969Q0 106 aaKnown RBP13.42□□□□□ -0.26
SPNS3-204ENST00000575194 ZNF479Q96JC4 524 aa13.41□□□□□ -0.26
SPNS3-204ENST00000575194 TRBV7-3A0A075B6L6 115 aa13.4□□□□□ -0.26
SPNS3-204ENST00000575194 PLAC8L1A1L4L8 177 aa13.4□□□□□ -0.26
SPNS3-204ENST00000575194 MAPKAPK5-AS1Q8N8E1 139 aa13.4□□□□□ -0.26
SPNS3-204ENST00000575194 CHCHD7Q9BUK0 85 aa13.4□□□□□ -0.26
SPNS3-204ENST00000575194 TMEM170BQ5T4T1 132 aa13.39□□□□□ -0.27
SPNS3-204ENST00000575194 TRGV2A0A075B6R0 118 aa13.39□□□□□ -0.27
SPNS3-204ENST00000575194 EMP1P54849 157 aa13.38□□□□□ -0.27
SPNS3-204ENST00000575194 DAZ4Q86SG3 579 aaKnown RBP13.38□□□□□ -0.27
SPNS3-204ENST00000575194 ZNRF2Q8NHG8 242 aa13.38□□□□□ -0.27
SPNS3-204ENST00000575194 PHLDA1Q8WV24 401 aaPredicted RBP13.38□□□□□ -0.27
SPNS3-204ENST00000575194 AMELXQ99217 191 aa13.38□□□□□ -0.27
SPNS3-204ENST00000575194 OPRPNQ99935 248 aaPredicted RBP13.38□□□□□ -0.27
SPNS3-204ENST00000575194 DAZ3Q9NR90 486 aaKnown RBP13.38□□□□□ -0.27
SPNS3-204ENST00000575194 Q9UF83 564 aa13.38□□□□□ -0.27
SPNS3-204ENST00000575194 GCSHP23434 173 aa13.37□□□□□ -0.27
SPNS3-204ENST00000575194 DNHD1Q96M86 4753 aa13.37□□□□□ -0.27
SPNS3-204ENST00000575194 GAGE12BA1L429 117 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 H3BRM9 83 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 GAGE7O76087 117 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 GAGE12FP0CL80 117 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 GAGE12GP0CL81 117 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 GAGE12IP0CL82 117 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 SMAGPQ0VAQ4 97 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 TIMM21Q9BVV7 248 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 UBE2D4Q9Y2X8 147 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 IGHV3-38A0A0C4DH36 116 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 CEND1Q8N111 149 aa13.36□□□□□ -0.27
SPNS3-204ENST00000575194 TM2D2Q9BX73 214 aa13.35□□□□□ -0.27
SPNS3-204ENST00000575194 MGAM2Q2M2H8 2515 aa13.35□□□□□ -0.27
SPNS3-204ENST00000575194 NBEAL1Q6ZS30 2694 aa13.35□□□□□ -0.27
SPNS3-204ENST00000575194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.34□□□□□ -0.27
SPNS3-204ENST00000575194 IGKV2-29A2NJV5 120 aaPredicted RBP13.34□□□□□ -0.27
SPNS3-204ENST00000575194 SMIM9A6NGZ8 99 aa13.34□□□□□ -0.27
SPNS3-204ENST00000575194 Q6ZVH6 145 aa13.34□□□□□ -0.27
SPNS3-204ENST00000575194 SLC25A29Q8N8R3 303 aa13.34□□□□□ -0.27
SPNS3-204ENST00000575194 HIST1H4GQ99525 98 aa13.34□□□□□ -0.27
SPNS3-204ENST00000575194 TRBV6-4A0A1B0GX49 114 aa13.33□□□□□ -0.27
SPNS3-204ENST00000575194 WIPF1O43516 503 aa13.33□□□□□ -0.27
SPNS3-204ENST00000575194 PTTG1IPP53801 180 aa13.33□□□□□ -0.27
SPNS3-204ENST00000575194 UBE2D3P61077 147 aa13.33□□□□□ -0.27
SPNS3-204ENST00000575194 UBE2D2P62837 147 aa13.33□□□□□ -0.27
SPNS3-204ENST00000575194 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.27
SPNS3-204ENST00000575194 TMEM223A0PJW6 202 aa13.33□□□□□ -0.28
SPNS3-204ENST00000575194 ZNF22P17026 224 aaPredicted RBP13.33□□□□□ -0.28
SPNS3-204ENST00000575194 VAMP3Q15836 100 aa13.33□□□□□ -0.28
SPNS3-204ENST00000575194 SCGB1D4Q6XE38 83 aa13.33□□□□□ -0.28
SPNS3-204ENST00000575194 TRGV4A0A0C4DH28 118 aa13.32□□□□□ -0.28
SPNS3-204ENST00000575194 A0A0J9YXV3 536 aa13.32□□□□□ -0.28
SPNS3-204ENST00000575194 LEPROTO15243 131 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms