RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 UBE2D4Q9Y2X8 147 aa6.49□□□□□ -1.37
NCBP3-204ENST00000574911 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 A4D1N5 150 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 TCL1BO95988 128 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 IGHV3-53P01767 116 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 IGHV3-30-3P0DP02 117 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 KHDC1LQ5JSQ8 128 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 TMEM263Q8WUH6 116 aaKnown RBP6.48□□□□□ -1.37
NCBP3-204ENST00000574911 SPATA25Q9BR10 227 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 SPANXA1Q9NS26 97 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 CSPG4Q6UVK1 2322 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 AKAP9Q99996 3911 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 TRBV20-1A0A075B6N2 111 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 TINCRA0A1B0GVN0 87 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 GAGE12HA6NDE8 117 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 TMEM238C9JI98 176 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 INSL3P51460 131 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 HIST2H2BDQ6DRA6 164 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 TIMM21Q9BVV7 248 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 PRRC2AP48634 2157 aaKnown RBP6.48□□□□□ -1.37
NCBP3-204ENST00000574911 A0A0B4J2C4 111 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 Q6ZSV7 163 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 SBSPONQ8IVN8 264 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 C1QTNF4Q9BXJ3 329 aa6.48□□□□□ -1.37
NCBP3-204ENST00000574911 MAP1AP78559 2803 aaPredicted RBP6.47□□□□□ -1.37
NCBP3-204ENST00000574911 DOPEY2Q9Y3R5 2298 aa6.47□□□□□ -1.37
NCBP3-204ENST00000574911 IGHV1-58A0A0C4DH39 117 aa6.47□□□□□ -1.37
NCBP3-204ENST00000574911 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
NCBP3-204ENST00000574911 SIGMAR1Q99720 223 aa6.47□□□□□ -1.37
NCBP3-204ENST00000574911 LITAFQ99732 161 aa6.47□□□□□ -1.37
NCBP3-204ENST00000574911 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.47□□□□□ -1.37
NCBP3-204ENST00000574911 TRAV25A0A0B4J276 109 aa6.47□□□□□ -1.37
NCBP3-204ENST00000574911 IGKV2-29A2NJV5 120 aaPredicted RBP6.47□□□□□ -1.37
NCBP3-204ENST00000574911 FOXI1Q12951 378 aa6.47□□□□□ -1.37
NCBP3-204ENST00000574911 RNASE13Q5GAN3 156 aaKnown RBP6.47□□□□□ -1.37
NCBP3-204ENST00000574911 TRAV8-3A0A0A6YYJ7 113 aa6.46□□□□□ -1.38
NCBP3-204ENST00000574911 ODF3L2Q3SX64 289 aa6.46□□□□□ -1.38
NCBP3-204ENST00000574911 IL17DQ8TAD2 202 aa6.46□□□□□ -1.38
NCBP3-204ENST00000574911 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.46□□□□□ -1.38
NCBP3-204ENST00000574911 AZU1P20160 251 aa6.46□□□□□ -1.38
NCBP3-204ENST00000574911 Q6ZUT4 128 aa6.46□□□□□ -1.38
NCBP3-204ENST00000574911 ZNF418Q8TF45 676 aaPredicted RBP6.46□□□□□ -1.38
NCBP3-204ENST00000574911 VSIG2Q96IQ7 327 aa6.46□□□□□ -1.38
NCBP3-204ENST00000574911 IGHV3-38A0A0C4DH36 116 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 ADARB2-AS1A8MUL3 147 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 C1orf158Q8N1D5 194 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 GTSF1LQ9H1H1 148 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 ERG28Q9UKR5 140 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 ANKRD17O75179 2603 aaKnown RBP6.45□□□□□ -1.38
NCBP3-204ENST00000574911 NACAE9PAV3 2078 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 SCGB1C2P0DMR2 95 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 SCGB1A1P11684 91 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 FHL3Q13643 280 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 SPANXDQ9BXN6 97 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 SPANXCQ9NY87 97 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 XCL2Q9UBD3 114 aa6.45□□□□□ -1.38
NCBP3-204ENST00000574911 UBR5O95071 2799 aaPredicted RBP6.45□□□□□ -1.38
NCBP3-204ENST00000574911 DNAJC9-AS1A6NH13 148 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 MXRA5Q9NR99 2828 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 NDUFA12Q9UI09 145 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 ZANQ9Y493 2812 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 SPINK8P0C7L1 97 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 TIRAPP58753 221 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 STHQ8IWL8 128 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
NCBP3-204ENST00000574911 CITED2Q99967 270 aaPredicted RBP6.44□□□□□ -1.38
NCBP3-204ENST00000574911 IGLV5-45A0A087WSX0 123 aa6.43□□□□□ -1.38
NCBP3-204ENST00000574911 TEN1Q86WV5 123 aa6.43□□□□□ -1.38
NCBP3-204ENST00000574911 TEX29Q8N6K0 151 aa6.43□□□□□ -1.38
NCBP3-204ENST00000574911 A8MZ25 164 aa6.43□□□□□ -1.38
NCBP3-204ENST00000574911 M0QXV9 152 aa6.43□□□□□ -1.38
NCBP3-204ENST00000574911 ZFAND6Q6FIF0 208 aa6.43□□□□□ -1.38
NCBP3-204ENST00000574911 PPDPFLQ8WWR9 84 aa6.43□□□□□ -1.38
NCBP3-204ENST00000574911 CCL24O00175 119 aa6.42□□□□□ -1.38
NCBP3-204ENST00000574911 MIAQ16674 131 aa6.42□□□□□ -1.38
NCBP3-204ENST00000574911 ESM1Q9NQ30 184 aa6.42□□□□□ -1.38
NCBP3-204ENST00000574911 H7C2G1 150 aa6.42□□□□□ -1.38
NCBP3-204ENST00000574911 TIMM17BO60830 172 aa6.42□□□□□ -1.38
NCBP3-204ENST00000574911 GEMIN7Q9H840 131 aaKnown RBP6.42□□□□□ -1.38
NCBP3-204ENST00000574911 IGHV3OR16-12A0A075B7B8 117 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 TRGV1A0A0A0MS02 117 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 A0A1W2PRX2 142 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 SMAGPQ0VAQ4 97 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 FAM19A3Q7Z5A8 133 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 C11orf44Q8N8P7 122 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 WFDC11Q8NEX6 87 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 CDIP1Q9H305 208 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 SORL1Q92673 2214 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 TRBV30A0A0K0K1B3 111 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 ANKRD29Q8N6D5 301 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.41□□□□□ -1.38
NCBP3-204ENST00000574911 RNF183Q96D59 192 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 USP9YO00507 2555 aaPredicted RBP6.41□□□□□ -1.38
NCBP3-204ENST00000574911 ZNF469Q96JG9 3925 aaPredicted RBP6.41□□□□□ -1.38
NCBP3-204ENST00000574911 POLQO75417 2590 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 MYO18BQ8IUG5 2567 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 TRBV10-1A0A0K0K1A3 114 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms