RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 A0A096LNJ9 63 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 RBAKDNA6NC62 111 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 FAM24AA6NFZ4 105 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 B4DSR2 109 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 SSSCA1O60232 199 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 IGLV1-51P01701 117 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 ZNF14P17017 642 aaPredicted RBP2.1□□□□□ -2.07
NUP88-209ENST00000574855 ZNF22P17026 224 aaPredicted RBP2.1□□□□□ -2.07
NUP88-209ENST00000574855 CKS2P33552 79 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 SNCAP37840 140 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 SERF2P84101 59 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 DEFB109BQ30KR1 87 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 SPRNQ5BIV9 151 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 Q5W150 140 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 UNQ5815/PRO19632Q6UWF5 114 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 LYZL1Q6UWQ5 148 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 ATP11AUNQ6ZP68 121 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 ZNF818PQ6ZRF7 136 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 DEFB124Q8NES8 71 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 FDCSPQ8NFU4 85 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 FAM213BQ8TBF2 198 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 KLF14Q8TD94 323 aaPredicted RBP2.1□□□□□ -2.07
NUP88-209ENST00000574855 RNF5Q99942 180 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 PSENENQ9NZ42 101 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 MALRD1Q5VYJ5 2156 aa2.1□□□□□ -2.07
NUP88-209ENST00000574855 EML5Q05BV3 1969 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 EXPH5Q8NEV8 1989 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 ASCC3Q8N3C0 2202 aaKnown RBP2.09□□□□□ -2.07
NUP88-209ENST00000574855 TRAV1-1A0A0B4J248 108 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 E7EQL1 145 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 C17orf112F2Z3M2 114 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 H3BQ85 93 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 PANO1I0J062 215 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 GNRH2O43555 120 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 SFTA3P0C7M3 94 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 COX7CP15954 63 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 MPV17P39210 176 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 IQCJQ1A5X6 159 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 DEFB116Q30KQ4 102 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 TDRG1Q3Y452 100 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 ASB16-AS1Q495Z4 193 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 NMSQ5H8A3 153 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 SPANXN5Q5MJ07 72 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 Q6ZQT7 251 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 Q8N814 137 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 DPH3P1Q9H4G8 78 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 TIMM9Q9Y5J7 89 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 CACNA1EQ15878 2313 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 BRWD1Q9NSI6 2320 aa2.09□□□□□ -2.07
NUP88-209ENST00000574855 PI4KAP42356 2102 aa2.09□□□□□ -2.08
NUP88-209ENST00000574855 SDK1Q7Z5N4 2213 aa2.09□□□□□ -2.08
NUP88-209ENST00000574855 BRCA2P51587 3418 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 TNRC6BQ9UPQ9 1833 aaKnown RBP2.08□□□□□ -2.08
NUP88-209ENST00000574855 TRAV7A0A075B6U4 112 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 IGKV2D-26A0A0A0MRZ7 120 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 IGHV1-18A0A0C4DH31 117 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 C7orf77A4D0Y5 90 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 CEBPZOSA8MTT3 80 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 SNCGO76070 127 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 SBSPONQ8IVN8 264 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 RPRMLQ8N4K4 120 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 CYB561D1Q8N8Q1 229 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 ATP6V0E2Q8NHE4 81 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 VSTM2AQ8TAG5 236 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 LINC00467Q9BRT7 94 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 TMEM242Q9NWH2 141 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 FAM215AQ9Y5M1 114 aa2.08□□□□□ -2.08
NUP88-209ENST00000574855 A0A087WWC5 75 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 TRAV3A0A0B4J244 114 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 IGHV1-24A0A0C4DH33 117 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 TRBV10-2A0A0K0K1G8 114 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 CTXND1A0A1B0GTU2 59 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 hDV103S1A0JD37 113 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 H3BPC8 53 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 H7C2G1 150 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 K7EP34 96 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 IGLV1-47P01700 117 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 IGHV3-53P01767 116 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 IAPPP10997 89 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 ADCYAP1P18509 176 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 FXYD2P54710 66 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 EDDM3BP56851 147 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 ROMO1P60602 79 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 ZNF816Q0VGE8 651 aaPredicted RBP2.07□□□□□ -2.08
NUP88-209ENST00000574855 ESRGQ1W209 222 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 Q6ZQT0 140 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 ZNF826PQ6ZT77 177 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 Q8N8P6 123 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 TSKUQ8WUA8 353 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 TXNDC17Q9BRA2 123 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 SLC50A1Q9BRV3 221 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 MANBALQ9NQG1 85 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 NHP2Q9NX24 153 aaKnown RBP2.07□□□□□ -2.08
NUP88-209ENST00000574855 CHD7Q9P2D1 2997 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 GNG13Q9P2W3 67 aa2.07□□□□□ -2.08
NUP88-209ENST00000574855 NCOA6Q14686 2063 aaPredicted RBP2.06□□□□□ -2.08
NUP88-209ENST00000574855 CHD9Q3L8U1 2897 aa2.06□□□□□ -2.08
NUP88-209ENST00000574855 UBE2L5PA0A1B0GUS4 154 aa2.06□□□□□ -2.08
NUP88-209ENST00000574855 C11orf86A6NJI1 115 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms