RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 CEBPGP53567 150 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 GAGE6Q13070 117 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 LINC01620Q4KN68 170 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 ATRAIDQ6UW56 229 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 CLPSL2Q6UWE3 100 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 NTM-AS1Q6ZSK4 140 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 NUDT10Q8NFP7 164 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 LYPD6BQ8NI32 183 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 DEFB104AQ8WTQ1 72 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 FRZBQ92765 325 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 NUDT11Q96G61 164 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 RPP21Q9H633 154 aaKnown RBP6.58□□□□□ -1.36
RPA1-206ENST00000573994 FAM30AQ9NZY2 134 aa6.58□□□□□ -1.36
RPA1-206ENST00000573994 CTRLP40313 264 aa6.57□□□□□ -1.36
RPA1-206ENST00000573994 OCC1Q8TAD7 63 aa6.57□□□□□ -1.36
RPA1-206ENST00000573994 CNFNQ9BYD5 112 aa6.57□□□□□ -1.36
RPA1-206ENST00000573994 TRBV25-1A0A075B6N4 114 aa6.56□□□□□ -1.36
RPA1-206ENST00000573994 HLA-DQA1P01909 254 aa6.56□□□□□ -1.36
RPA1-206ENST00000573994 NTF3P20783 257 aa6.56□□□□□ -1.36
RPA1-206ENST00000573994 RBX1P62877 108 aa6.56□□□□□ -1.36
RPA1-206ENST00000573994 ENHOQ6UWT2 76 aa6.56□□□□□ -1.36
RPA1-206ENST00000573994 C1orf43Q9BWL3 253 aa6.56□□□□□ -1.36
RPA1-206ENST00000573994 DPH3P1Q9H4G8 78 aa6.56□□□□□ -1.36
RPA1-206ENST00000573994 TRAV26-2A0A0B4J265 109 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 IGHV1-24A0A0C4DH33 117 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 TWIST1Q15672 202 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 MIAQ16674 131 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 IQCJQ1A5X6 159 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 C14orf177Q52M58 125 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 RASL11AQ6T310 242 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 TEX261Q6UWH6 196 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 FAM231DQ6ZW35 169 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 SMIM15Q7Z3B0 74 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 GTSF1Q8WW33 167 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 NIT2Q9NQR4 276 aa6.55□□□□□ -1.36
RPA1-206ENST00000573994 SRRM2Q9UQ35 2752 aaKnown RBP6.55□□□□□ -1.36
RPA1-206ENST00000573994 A8MWL6 223 aa6.54□□□□□ -1.36
RPA1-206ENST00000573994 GATCO43716 136 aaKnown RBP6.54□□□□□ -1.36
RPA1-206ENST00000573994 FOXA3P55318 350 aaPredicted RBP6.54□□□□□ -1.36
RPA1-206ENST00000573994 CT83Q5H943 113 aa6.54□□□□□ -1.36
RPA1-206ENST00000573994 LINC00269Q8N2A0 174 aa6.54□□□□□ -1.36
RPA1-206ENST00000573994 PGLYRP4Q96LB8 373 aa6.54□□□□□ -1.36
RPA1-206ENST00000573994 FAM210AQ96ND0 272 aa6.54□□□□□ -1.36
RPA1-206ENST00000573994 INAFM2P0DMQ5 153 aa6.53□□□□□ -1.36
RPA1-206ENST00000573994 GATD1Q8NB37 220 aa6.53□□□□□ -1.36
RPA1-206ENST00000573994 RPL39LQ96EH5 51 aaKnown RBP6.53□□□□□ -1.36
RPA1-206ENST00000573994 TMEM243Q9BU79 118 aa6.53□□□□□ -1.36
RPA1-206ENST00000573994 EIF5A2Q9GZV4 153 aaKnown RBP6.53□□□□□ -1.36
RPA1-206ENST00000573994 PRR34Q9NV39 138 aa6.53□□□□□ -1.36
RPA1-206ENST00000573994 IGLV10-54A0A075B6I4 117 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 A0A1B0GUV1 79 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 FAM231BA6NCW3 169 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 USP17L23D6RBM5 183 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 AMTP48728 403 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 Q6ZSA8 131 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 SMIM7Q9BQ49 75 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 GFRA4Q9GZZ7 299 aa6.52□□□□□ -1.37
RPA1-206ENST00000573994 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
RPA1-206ENST00000573994 IGLV4-60A0A075B6I1 120 aa6.51□□□□□ -1.37
RPA1-206ENST00000573994 TRAV8-4A0A0B4J246 113 aa6.51□□□□□ -1.37
RPA1-206ENST00000573994 COTL1Q14019 142 aa6.51□□□□□ -1.37
RPA1-206ENST00000573994 LINC01551Q86U37 167 aa6.51□□□□□ -1.37
RPA1-206ENST00000573994 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
RPA1-206ENST00000573994 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
RPA1-206ENST00000573994 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
RPA1-206ENST00000573994 UBE2L6O14933 153 aa6.5□□□□□ -1.37
RPA1-206ENST00000573994 NCR2O95944 276 aa6.5□□□□□ -1.37
RPA1-206ENST00000573994 SRP19P09132 144 aaKnown RBP6.5□□□□□ -1.37
RPA1-206ENST00000573994 REG3AQ06141 175 aa6.5□□□□□ -1.37
RPA1-206ENST00000573994 FAM74A3Q4VXF1 159 aa6.5□□□□□ -1.37
RPA1-206ENST00000573994 KRTAP26-1Q6PEX3 210 aa6.5□□□□□ -1.37
RPA1-206ENST00000573994 SCXQ7RTU7 201 aa6.5□□□□□ -1.37
RPA1-206ENST00000573994 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
RPA1-206ENST00000573994 ZNF727A8MUV8 499 aa6.49□□□□□ -1.37
RPA1-206ENST00000573994 H7C423 109 aa6.49□□□□□ -1.37
RPA1-206ENST00000573994 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
RPA1-206ENST00000573994 PRSS1P07477 247 aa6.49□□□□□ -1.37
RPA1-206ENST00000573994 DGAT2L7PQ6IED9 249 aa6.49□□□□□ -1.37
RPA1-206ENST00000573994 CLRN3Q8NCR9 226 aa6.49□□□□□ -1.37
RPA1-206ENST00000573994 TSKUQ8WUA8 353 aa6.49□□□□□ -1.37
RPA1-206ENST00000573994 OSTCQ9NRP0 149 aa6.49□□□□□ -1.37
RPA1-206ENST00000573994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.48□□□□□ -1.37
RPA1-206ENST00000573994 IGKV3OR2-268A0A0C4DH90 116 aa6.48□□□□□ -1.37
RPA1-206ENST00000573994 IGKV2-29A2NJV5 120 aaPredicted RBP6.48□□□□□ -1.37
RPA1-206ENST00000573994 HIGD1CA8MV81 97 aa6.48□□□□□ -1.37
RPA1-206ENST00000573994 GAS8-AS1O95177 125 aa6.48□□□□□ -1.37
RPA1-206ENST00000573994 TRBV6-5A0A0K0K1A5 114 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 A0A1B0GUT8 65 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 C9JQL5 133 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 APCSP02743 223 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 TMEM241Q24JQ0 296 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 CHAC1Q9BUX1 264 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 TMEM191AQ9H0A3 160 aa6.47□□□□□ -1.37
RPA1-206ENST00000573994 hDV102S1A0JD36 115 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 I3L3M4 83 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 PPP1R17O96001 155 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 PEA15Q15121 130 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 ADIRFQ15847 76 aa6.46□□□□□ -1.38
RPA1-206ENST00000573994 AMMECR1LQ6DCA0 310 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms