RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 VCYO14598 125 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 PSCAO43653 123 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 APCSP02743 223 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 SUMO2P61956 95 aaKnown RBP8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 Q0VG73 95 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 GAGE6Q13070 117 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 TM2D2Q9BX73 214 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 Q9HAA7 133 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 COX11Q9Y6N1 276 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
TRAPPC1-206ENST00000573989 TRBV24-1A0A075B6N3 115 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 D6R8Y8 96 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 H7C423 109 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 PHOX2AO14813 284 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 EREGO14944 169 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 TCAPO15273 167 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 GAS8-AS1O95177 125 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 CRPP02741 224 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 ANGP03950 147 aaKnown RBP8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 RPS10P46783 165 aaKnown RBP8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 ATRAIDQ6UW56 229 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 ORMDL3Q8N138 153 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 Q8N3U1 123 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 KIR2DL4Q99706 377 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
TRAPPC1-206ENST00000573989 DNAH2Q9P225 4427 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 A0A1B0GUV1 79 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 FCER1GP30273 86 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 COX19Q49B96 90 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 TMEM136Q6ZRR5 245 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 NRACQ8N912 160 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 UBE2WQ96B02 151 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 LAMTOR2Q9Y2Q5 125 aa8.59□□□□□ -1.03
TRAPPC1-206ENST00000573989 TNFRSF6BO95407 300 aa8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 RBX1P62877 108 aa8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 TNP2Q05952 138 aa8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 SMAGPQ0VAQ4 97 aa8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 DEFB104AQ8WTQ1 72 aa8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 PRELID3AQ96N28 172 aa8.58□□□□□ -1.04
TRAPPC1-206ENST00000573989 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
TRAPPC1-206ENST00000573989 Q8N976 141 aa8.57□□□□□ -1.04
TRAPPC1-206ENST00000573989 TSHBP01222 138 aa8.56□□□□□ -1.04
TRAPPC1-206ENST00000573989 MIAQ16674 131 aa8.56□□□□□ -1.04
TRAPPC1-206ENST00000573989 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
TRAPPC1-206ENST00000573989 TMEM18Q96B42 140 aa8.56□□□□□ -1.04
TRAPPC1-206ENST00000573989 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
TRAPPC1-206ENST00000573989 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
TRAPPC1-206ENST00000573989 IGKV2D-24A0A075B6R9 120 aa8.55□□□□□ -1.04
TRAPPC1-206ENST00000573989 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
TRAPPC1-206ENST00000573989 NPYP01303 97 aa8.55□□□□□ -1.04
TRAPPC1-206ENST00000573989 MT-ND6P03923 174 aa8.55□□□□□ -1.04
TRAPPC1-206ENST00000573989 ZNF25P17030 456 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC1-206ENST00000573989 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
TRAPPC1-206ENST00000573989 C1orf43Q9BWL3 253 aa8.55□□□□□ -1.04
TRAPPC1-206ENST00000573989 DNAH17Q9UFH2 4485 aa8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 IGKV2-29A2NJV5 120 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 FGF6P10767 208 aa8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 ESDP10768 282 aa8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 RAB5AP20339 215 aa8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 SLC7A5P1Q8MH63 180 aa8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 LINC00269Q8N2A0 174 aa8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 MAP1LC3AQ9H492 121 aa8.54□□□□□ -1.04
TRAPPC1-206ENST00000573989 REG3AQ06141 175 aa8.53□□□□□ -1.04
TRAPPC1-206ENST00000573989 DGAT2L7PQ6IED9 249 aa8.53□□□□□ -1.04
TRAPPC1-206ENST00000573989 ENHOQ6UWT2 76 aa8.53□□□□□ -1.04
TRAPPC1-206ENST00000573989 PRR34Q9NV39 138 aa8.53□□□□□ -1.04
TRAPPC1-206ENST00000573989 IGLV4-60A0A075B6I1 120 aa8.52□□□□□ -1.05
TRAPPC1-206ENST00000573989 A0A087WTM6 91 aa8.52□□□□□ -1.05
TRAPPC1-206ENST00000573989 TRAV8-4A0A0B4J246 113 aa8.52□□□□□ -1.05
TRAPPC1-206ENST00000573989 PRSS47A8MTI9 375 aa8.52□□□□□ -1.05
TRAPPC1-206ENST00000573989 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
TRAPPC1-206ENST00000573989 OR5A1Q8NGJ0 315 aa8.52□□□□□ -1.05
TRAPPC1-206ENST00000573989 FAT2Q9NYQ8 4349 aa8.51□□□□□ -1.05
TRAPPC1-206ENST00000573989 CLPSL2Q6UWE3 100 aa8.51□□□□□ -1.05
TRAPPC1-206ENST00000573989 MRPL52Q86TS9 123 aaKnown RBP8.51□□□□□ -1.05
TRAPPC1-206ENST00000573989 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
TRAPPC1-206ENST00000573989 K7EMI3 77 aa8.5□□□□□ -1.05
TRAPPC1-206ENST00000573989 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
TRAPPC1-206ENST00000573989 SPATA12Q7Z6I5 190 aa8.5□□□□□ -1.05
TRAPPC1-206ENST00000573989 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
TRAPPC1-206ENST00000573989 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
TRAPPC1-206ENST00000573989 PGPEP1Q9NXJ5 209 aa8.5□□□□□ -1.05
TRAPPC1-206ENST00000573989 TGIF2-C20orf24A0A0A6YYL0 155 aa8.49□□□□□ -1.05
TRAPPC1-206ENST00000573989 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
TRAPPC1-206ENST00000573989 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
TRAPPC1-206ENST00000573989 Q8N8P6 123 aa8.49□□□□□ -1.05
TRAPPC1-206ENST00000573989 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
TRAPPC1-206ENST00000573989 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
TRAPPC1-206ENST00000573989 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
TRAPPC1-206ENST00000573989 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
TRAPPC1-206ENST00000573989 LRCOL1A6NCL2 159 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms