RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TRBV6-5A0A0K0K1A5 114 aa10.6□□□□□ -0.71
CHD3-215ENST00000572750 ATP5L2Q7Z4Y8 100 aa10.6□□□□□ -0.71
CHD3-215ENST00000572750 KLK12Q9UKR0 248 aa10.6□□□□□ -0.71
CHD3-215ENST00000572750 S100A8P05109 93 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 AMTP48728 403 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 C10orf91Q5T1B1 145 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 NRACQ8N912 160 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 Q8N976 141 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
CHD3-215ENST00000572750 CARHSP1Q9Y2V2 147 aaKnown RBP10.59□□□□□ -0.71
CHD3-215ENST00000572750 ATRAIDQ6UW56 229 aa10.58□□□□□ -0.72
CHD3-215ENST00000572750 TMEM70Q9BUB7 260 aa10.58□□□□□ -0.72
CHD3-215ENST00000572750 APCSP02743 223 aa10.57□□□□□ -0.72
CHD3-215ENST00000572750 PKIAP61925 76 aa10.57□□□□□ -0.72
CHD3-215ENST00000572750 RBX1P62877 108 aa10.57□□□□□ -0.72
CHD3-215ENST00000572750 CTDSP1Q9GZU7 261 aa10.57□□□□□ -0.72
CHD3-215ENST00000572750 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
CHD3-215ENST00000572750 DMBT1Q9UGM3 2413 aaPredicted RBP10.56□□□□□ -0.72
CHD3-215ENST00000572750 TRAV8-3A0A0A6YYJ7 113 aa10.56□□□□□ -0.72
CHD3-215ENST00000572750 I3L3M4 83 aa10.56□□□□□ -0.72
CHD3-215ENST00000572750 PSCAO43653 123 aa10.56□□□□□ -0.72
CHD3-215ENST00000572750 ANGP03950 147 aaKnown RBP10.56□□□□□ -0.72
CHD3-215ENST00000572750 PMCHP20382 165 aa10.56□□□□□ -0.72
CHD3-215ENST00000572750 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
CHD3-215ENST00000572750 UBE2WQ96B02 151 aa10.56□□□□□ -0.72
CHD3-215ENST00000572750 BTF3L4Q96K17 158 aa10.56□□□□□ -0.72
CHD3-215ENST00000572750 C7orf77A4D0Y5 90 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 D6R8Y8 96 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 UBE2L6O14933 153 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 TSHBP01222 138 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 CKS2P33552 79 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 ELOBQ15370 118 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 CLRN3Q8NCR9 226 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 IMMP2LQ96T52 175 aa10.55□□□□□ -0.72
CHD3-215ENST00000572750 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
CHD3-215ENST00000572750 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
CHD3-215ENST00000572750 CRPP02741 224 aa10.54□□□□□ -0.72
CHD3-215ENST00000572750 POLR2KP53803 58 aaKnown RBP10.54□□□□□ -0.72
CHD3-215ENST00000572750 SUMO2P61956 95 aaKnown RBP10.54□□□□□ -0.72
CHD3-215ENST00000572750 RHEBQ15382 184 aa10.54□□□□□ -0.72
CHD3-215ENST00000572750 DNAH5Q8TE73 4624 aa10.54□□□□□ -0.72
CHD3-215ENST00000572750 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 A0A087WTM6 91 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 PPP1R17O96001 155 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 APOC3P02656 99 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 ENHOQ6UWT2 76 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 RPS10P5Q9NQ39 176 aa10.53□□□□□ -0.72
CHD3-215ENST00000572750 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
CHD3-215ENST00000572750 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
CHD3-215ENST00000572750 NPYP01303 97 aa10.52□□□□□ -0.73
CHD3-215ENST00000572750 KRTAP10-2P60368 255 aa10.52□□□□□ -0.73
CHD3-215ENST00000572750 LINC00269Q8N2A0 174 aa10.52□□□□□ -0.73
CHD3-215ENST00000572750 C20orf203Q8NBC4 194 aa10.52□□□□□ -0.73
CHD3-215ENST00000572750 TM2D2Q9BX73 214 aa10.52□□□□□ -0.73
CHD3-215ENST00000572750 FUSP35637 526 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHD3-215ENST00000572750 ORMDL3Q8N138 153 aa10.51□□□□□ -0.73
CHD3-215ENST00000572750 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 LRCOL1A6NCL2 159 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 VCYO14598 125 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 PPBPP02775 128 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 S100PP25815 95 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 FCER1GP30273 86 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 Q0VG73 95 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 NDUFA5Q16718 116 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 RMI2Q96E14 147 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 PRELID3AQ96N28 172 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 SMIM2Q9BVW6 85 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 PRR34Q9NV39 138 aa10.5□□□□□ -0.73
CHD3-215ENST00000572750 TRAV9-1A0A075B6T8 112 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 A0A1B0GUV1 79 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 EREGO14944 169 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 LECT2O14960 151 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 FGF6P10767 208 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 ESDP10768 282 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 REG3AQ06141 175 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 WFDC2Q14508 124 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
CHD3-215ENST00000572750 TMEM136Q6ZRR5 245 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 SVBPQ8N300 66 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 KIR2DL4Q99706 377 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
CHD3-215ENST00000572750 MYCBP2O75592 4640 aa10.48□□□□□ -0.73
CHD3-215ENST00000572750 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
CHD3-215ENST00000572750 MIAQ16674 131 aa10.48□□□□□ -0.73
CHD3-215ENST00000572750 IGLV10-54A0A075B6I4 117 aa10.47□□□□□ -0.73
CHD3-215ENST00000572750 H7C423 109 aa10.47□□□□□ -0.73
CHD3-215ENST00000572750 PHOX2AO14813 284 aa10.47□□□□□ -0.73
CHD3-215ENST00000572750 SNAPINO95295 136 aa10.47□□□□□ -0.73
CHD3-215ENST00000572750 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
CHD3-215ENST00000572750 SLC7A5P1Q8MH63 180 aa10.47□□□□□ -0.73
CHD3-215ENST00000572750 COX11Q9Y6N1 276 aa10.47□□□□□ -0.73
CHD3-215ENST00000572750 HLA-DQA1P01909 254 aa10.46□□□□□ -0.73
CHD3-215ENST00000572750 BAALCQ8WXS3 180 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms