RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 FAT3Q8TDW7 4589 aa9.37□□□□□ -0.91
CIITA-205ENST00000571186 HMCN2Q8NDA2 5059 aa9.36□□□□□ -0.91
CIITA-205ENST00000571186 IGKV2D-24A0A075B6R9 120 aa9.36□□□□□ -0.91
CIITA-205ENST00000571186 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
CIITA-205ENST00000571186 GATD1Q8NB37 220 aa9.36□□□□□ -0.91
CIITA-205ENST00000571186 SMDT1Q9H4I9 107 aa9.36□□□□□ -0.91
CIITA-205ENST00000571186 URGCP-MRPS24S4R325 110 aa9.36□□□□□ -0.91
CIITA-205ENST00000571186 TMEM262E9PQX1 116 aa9.35□□□□□ -0.91
CIITA-205ENST00000571186 H7C1H1 209 aa9.35□□□□□ -0.91
CIITA-205ENST00000571186 RAB14P61106 215 aa9.35□□□□□ -0.91
CIITA-205ENST00000571186 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
CIITA-205ENST00000571186 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
CIITA-205ENST00000571186 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
CIITA-205ENST00000571186 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
CIITA-205ENST00000571186 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
CIITA-205ENST00000571186 NIT2Q9NQR4 276 aa9.34□□□□□ -0.91
CIITA-205ENST00000571186 KLK12Q9UKR0 248 aa9.34□□□□□ -0.91
CIITA-205ENST00000571186 A0A087WX48 190 aa9.33□□□□□ -0.92
CIITA-205ENST00000571186 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
CIITA-205ENST00000571186 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
CIITA-205ENST00000571186 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
CIITA-205ENST00000571186 CLLU1Q5K131 121 aa9.33□□□□□ -0.92
CIITA-205ENST00000571186 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
CIITA-205ENST00000571186 UBE2WQ96B02 151 aa9.33□□□□□ -0.92
CIITA-205ENST00000571186 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
CIITA-205ENST00000571186 GAGE6Q13070 117 aa9.32□□□□□ -0.92
CIITA-205ENST00000571186 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.32□□□□□ -0.92
CIITA-205ENST00000571186 PKHD1L1Q86WI1 4243 aa9.31□□□□□ -0.92
CIITA-205ENST00000571186 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
CIITA-205ENST00000571186 ATRAIDQ6UW56 229 aa9.31□□□□□ -0.92
CIITA-205ENST00000571186 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
CIITA-205ENST00000571186 TRBV25-1A0A075B6N4 114 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 IGHV1-24A0A0C4DH33 117 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 SMIM27A0A1W2PRY6 76 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 IQCJQ1A5X6 159 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 TMEM97Q5BJF2 176 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 KCNIP4Q6PIL6 250 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 AMN1Q8IY45 258 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
CIITA-205ENST00000571186 RAB4AP20338 218 aa9.29□□□□□ -0.92
CIITA-205ENST00000571186 RIGQ13278 110 aa9.29□□□□□ -0.92
CIITA-205ENST00000571186 ELOBQ15370 118 aa9.29□□□□□ -0.92
CIITA-205ENST00000571186 ENHOQ6UWT2 76 aa9.29□□□□□ -0.92
CIITA-205ENST00000571186 CHCHD7Q9BUK0 85 aa9.29□□□□□ -0.92
CIITA-205ENST00000571186 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
CIITA-205ENST00000571186 SMKR1H3BMG3 65 aa9.28□□□□□ -0.92
CIITA-205ENST00000571186 ANGP03950 147 aaKnown RBP9.28□□□□□ -0.92
CIITA-205ENST00000571186 RBX1P62877 108 aa9.28□□□□□ -0.92
CIITA-205ENST00000571186 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
CIITA-205ENST00000571186 CLPSL2Q6UWE3 100 aa9.28□□□□□ -0.92
CIITA-205ENST00000571186 NCR2O95944 276 aa9.27□□□□□ -0.93
CIITA-205ENST00000571186 RPS10P46783 165 aaKnown RBP9.27□□□□□ -0.93
CIITA-205ENST00000571186 AMTP48728 403 aa9.27□□□□□ -0.93
CIITA-205ENST00000571186 Q0VG73 95 aa9.27□□□□□ -0.93
CIITA-205ENST00000571186 COTL1Q14019 142 aa9.27□□□□□ -0.93
CIITA-205ENST00000571186 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
CIITA-205ENST00000571186 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
CIITA-205ENST00000571186 CAMPP49913 170 aa9.26□□□□□ -0.93
CIITA-205ENST00000571186 HNRNPA3P51991 378 aaKnown RBP9.26□□□□□ -0.93
CIITA-205ENST00000571186 MRPL54Q6P161 138 aaKnown RBP9.26□□□□□ -0.93
CIITA-205ENST00000571186 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
CIITA-205ENST00000571186 IGLV4-60A0A075B6I1 120 aa9.25□□□□□ -0.93
CIITA-205ENST00000571186 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
CIITA-205ENST00000571186 C20orf203Q8NBC4 194 aa9.25□□□□□ -0.93
CIITA-205ENST00000571186 TRBV6-5A0A0K0K1A5 114 aa9.24□□□□□ -0.93
CIITA-205ENST00000571186 CRPP02741 224 aa9.24□□□□□ -0.93
CIITA-205ENST00000571186 ADCYAP1P18509 176 aa9.24□□□□□ -0.93
CIITA-205ENST00000571186 PMCHP20382 165 aa9.24□□□□□ -0.93
CIITA-205ENST00000571186 PKIAP61925 76 aa9.24□□□□□ -0.93
CIITA-205ENST00000571186 MRPL51Q4U2R6 128 aaKnown RBP9.24□□□□□ -0.93
CIITA-205ENST00000571186 MRAP2Q96G30 205 aa9.24□□□□□ -0.93
CIITA-205ENST00000571186 ST20Q9HBF5 79 aa9.24□□□□□ -0.93
CIITA-205ENST00000571186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
CIITA-205ENST00000571186 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
CIITA-205ENST00000571186 UBE2L6O14933 153 aa9.23□□□□□ -0.93
CIITA-205ENST00000571186 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
CIITA-205ENST00000571186 A0A1B0GXF2 115 aa9.22□□□□□ -0.93
CIITA-205ENST00000571186 USP17L23D6RBM5 183 aa9.22□□□□□ -0.93
CIITA-205ENST00000571186 I3L3M4 83 aa9.22□□□□□ -0.93
CIITA-205ENST00000571186 TSHBP01222 138 aa9.22□□□□□ -0.93
CIITA-205ENST00000571186 PNRC1Q12796 327 aaPredicted RBP9.22□□□□□ -0.93
CIITA-205ENST00000571186 NRACQ8N912 160 aa9.22□□□□□ -0.93
CIITA-205ENST00000571186 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
CIITA-205ENST00000571186 TMEM242Q9NWH2 141 aa9.22□□□□□ -0.93
CIITA-205ENST00000571186 IGLV10-54A0A075B6I4 117 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 TMEM218A2RU14 115 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 PPP1R2P9O14990 202 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 HLA-DQA1P01909 254 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 APCSP02743 223 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 POLR2KP53803 58 aaKnown RBP9.21□□□□□ -0.94
CIITA-205ENST00000571186 HBBP68871 147 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 REG3AQ06141 175 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
CIITA-205ENST00000571186 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 A0A1B0GW15 77 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 F8W036 122 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 MT-ND4LP03901 98 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 PRSS1P07477 247 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 MIAQ16674 131 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 DGAT2L7PQ6IED9 249 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms