RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 DUX3Q96PT4 197 aa11.4□□□□□ -0.58
SMG6-207ENST00000570756 BRI3O95415 125 aa11.39□□□□□ -0.59
SMG6-207ENST00000570756 ACYP1P07311 99 aa11.39□□□□□ -0.59
SMG6-207ENST00000570756 ADAMTSL4-AS1Q5T5F5 129 aa11.39□□□□□ -0.59
SMG6-207ENST00000570756 TMEM61Q8N0U2 210 aa11.39□□□□□ -0.59
SMG6-207ENST00000570756 PRRC2AP48634 2157 aaKnown RBP11.39□□□□□ -0.59
SMG6-207ENST00000570756 IGHV3-11P01762 117 aa11.39□□□□□ -0.59
SMG6-207ENST00000570756 IMUPQ9GZP8 106 aa11.39□□□□□ -0.59
SMG6-207ENST00000570756 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
SMG6-207ENST00000570756 UBR5O95071 2799 aaPredicted RBP11.38□□□□□ -0.59
SMG6-207ENST00000570756 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
SMG6-207ENST00000570756 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
SMG6-207ENST00000570756 MED13LQ71F56 2210 aa11.37□□□□□ -0.59
SMG6-207ENST00000570756 VSIG2Q96IQ7 327 aa11.37□□□□□ -0.59
SMG6-207ENST00000570756 TIMM17BO60830 172 aa11.37□□□□□ -0.59
SMG6-207ENST00000570756 IGHV1OR15-1A0A075B7D0 117 aa11.36□□□□□ -0.59
SMG6-207ENST00000570756 CCL21O00585 134 aa11.36□□□□□ -0.59
SMG6-207ENST00000570756 DCANP1Q8TF63 244 aa11.36□□□□□ -0.59
SMG6-207ENST00000570756 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
SMG6-207ENST00000570756 PF4V1P10720 104 aa11.35□□□□□ -0.59
SMG6-207ENST00000570756 GNLYP22749 145 aa11.35□□□□□ -0.59
SMG6-207ENST00000570756 NPC2P61916 151 aa11.35□□□□□ -0.59
SMG6-207ENST00000570756 GCN1Q92616 2671 aaKnown RBP11.34□□□□□ -0.59
SMG6-207ENST00000570756 K7EMT4 169 aa11.34□□□□□ -0.59
SMG6-207ENST00000570756 Q6ZSV7 163 aa11.34□□□□□ -0.59
SMG6-207ENST00000570756 ZNF843Q8N446 348 aa11.34□□□□□ -0.59
SMG6-207ENST00000570756 HRNRQ86YZ3 2850 aaPredicted RBP11.34□□□□□ -0.59
SMG6-207ENST00000570756 TRAV12-2A0A075B6T6 113 aa11.34□□□□□ -0.59
SMG6-207ENST00000570756 CDSNQ15517 529 aa11.34□□□□□ -0.59
SMG6-207ENST00000570756 EDA2RQ9HAV5 297 aa11.34□□□□□ -0.59
SMG6-207ENST00000570756 FAM236AA0A1B0GUQ0 79 aa11.33□□□□□ -0.6
SMG6-207ENST00000570756 FAM236BA0A1B0GV22 79 aa11.33□□□□□ -0.6
SMG6-207ENST00000570756 LINC01587Q99440 93 aa11.33□□□□□ -0.6
SMG6-207ENST00000570756 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
SMG6-207ENST00000570756 IGHG2P01859 326 aa11.32□□□□□ -0.6
SMG6-207ENST00000570756 LMO4P61968 165 aa11.32□□□□□ -0.6
SMG6-207ENST00000570756 SNRPD3P62318 126 aaKnown RBP11.32□□□□□ -0.6
SMG6-207ENST00000570756 FAM104AQ969W3 186 aa11.32□□□□□ -0.6
SMG6-207ENST00000570756 CIRBPQ14011 172 aaKnown RBP11.31□□□□□ -0.6
SMG6-207ENST00000570756 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
SMG6-207ENST00000570756 MAP1AP78559 2803 aaPredicted RBP11.3□□□□□ -0.6
SMG6-207ENST00000570756 LINC00643Q86TS7 51 aa11.3□□□□□ -0.6
SMG6-207ENST00000570756 DOPEY1Q5JWR5 2465 aa11.3□□□□□ -0.6
SMG6-207ENST00000570756 FASNP49327 2511 aaKnown RBP11.3□□□□□ -0.6
SMG6-207ENST00000570756 CEMP1Q6PRD7 247 aaPredicted RBP11.3□□□□□ -0.6
SMG6-207ENST00000570756 CELSR2Q9HCU4 2923 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 ATP5G1P05496 136 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 BPESC1Q9GZL8 116 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 IGHV3OR16-10A0A075B7F0 116 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 NDUFA1O15239 70 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 ADORA2A-AS1P86434 159 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 SPINK13Q1W4C9 94 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
SMG6-207ENST00000570756 COPS9Q8WXC6 57 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
SMG6-207ENST00000570756 A8MZ25 164 aa11.28□□□□□ -0.6
SMG6-207ENST00000570756 COX7A2LO14548 114 aa11.28□□□□□ -0.6
SMG6-207ENST00000570756 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
SMG6-207ENST00000570756 AKAP6Q13023 2319 aa11.27□□□□□ -0.6
SMG6-207ENST00000570756 IGLV1-40P01703 118 aa11.27□□□□□ -0.6
SMG6-207ENST00000570756 EDN2P20800 178 aa11.27□□□□□ -0.6
SMG6-207ENST00000570756 C9orf153Q5TBE3 101 aa11.27□□□□□ -0.6
SMG6-207ENST00000570756 C3orf22Q8N5N4 141 aa11.27□□□□□ -0.6
SMG6-207ENST00000570756 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.6
SMG6-207ENST00000570756 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.6
SMG6-207ENST00000570756 USP9YO00507 2555 aaPredicted RBP11.27□□□□□ -0.61
SMG6-207ENST00000570756 LY6EQ16553 131 aa11.27□□□□□ -0.61
SMG6-207ENST00000570756 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
SMG6-207ENST00000570756 ASH1LQ9NR48 2969 aaKnown RBP11.27□□□□□ -0.61
SMG6-207ENST00000570756 CSMD2Q7Z408 3487 aa11.27□□□□□ -0.61
SMG6-207ENST00000570756 UQCRQO14949 82 aa11.26□□□□□ -0.61
SMG6-207ENST00000570756 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
SMG6-207ENST00000570756 C3orf56Q8N813 242 aa11.26□□□□□ -0.61
SMG6-207ENST00000570756 DAND5Q8N907 189 aa11.26□□□□□ -0.61
SMG6-207ENST00000570756 DUX5Q96PT3 197 aa11.26□□□□□ -0.61
SMG6-207ENST00000570756 NDUFA7O95182 113 aa11.25□□□□□ -0.61
SMG6-207ENST00000570756 LINC00308Q8TCZ7 52 aa11.25□□□□□ -0.61
SMG6-207ENST00000570756 SVEP1Q4LDE5 3571 aa11.25□□□□□ -0.61
SMG6-207ENST00000570756 NBPF19A0A087WUL8 3843 aa11.25□□□□□ -0.61
SMG6-207ENST00000570756 IGHV3-73A0A0B4J1V6 119 aa11.25□□□□□ -0.61
SMG6-207ENST00000570756 CHCHD7Q9BUK0 85 aa11.25□□□□□ -0.61
SMG6-207ENST00000570756 K7EQG2 157 aa11.24□□□□□ -0.61
SMG6-207ENST00000570756 TRACP01848 142 aa11.24□□□□□ -0.61
SMG6-207ENST00000570756 CXCL5P42830 114 aa11.24□□□□□ -0.61
SMG6-207ENST00000570756 TIRAPP58753 221 aa11.24□□□□□ -0.61
SMG6-207ENST00000570756 RNF152Q8N8N0 203 aa11.24□□□□□ -0.61
SMG6-207ENST00000570756 SMCR5Q8TEV8 140 aa11.24□□□□□ -0.61
SMG6-207ENST00000570756 CDKN2A-AS1Q9UH64 79 aa11.24□□□□□ -0.61
SMG6-207ENST00000570756 IGLV5-45A0A087WSX0 123 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 A0A1W2PPR1 153 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 A6NDX4 124 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 H3BUX3 64 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 LINC00526Q96FQ7 95 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 DNAJC30Q96LL9 226 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 PEMTQ9UBM1 199 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 BLCAPP62952 87 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
SMG6-207ENST00000570756 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
SMG6-207ENST00000570756 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
SMG6-207ENST00000570756 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms