RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 ALKBH7Q9BT30 221 aaPredicted RBP10.3□□□□□ -0.76
RAB40B-203ENST00000570676 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
RAB40B-203ENST00000570676 LAMTOR2Q9Y2Q5 125 aa10.3□□□□□ -0.76
RAB40B-203ENST00000570676 TRBV7-3A0A075B6L6 115 aa10.29□□□□□ -0.76
RAB40B-203ENST00000570676 TRBV6-5A0A0K0K1A5 114 aa10.29□□□□□ -0.76
RAB40B-203ENST00000570676 PHOX2AO14813 284 aa10.29□□□□□ -0.76
RAB40B-203ENST00000570676 LYPD5Q6UWN5 251 aa10.29□□□□□ -0.76
RAB40B-203ENST00000570676 LRP1BQ9NZR2 4599 aa10.28□□□□□ -0.76
RAB40B-203ENST00000570676 UBE2D3P61077 147 aa10.28□□□□□ -0.76
RAB40B-203ENST00000570676 UBE2D2P62837 147 aa10.28□□□□□ -0.76
RAB40B-203ENST00000570676 NEGR1Q7Z3B1 354 aa10.28□□□□□ -0.76
RAB40B-203ENST00000570676 SPATA12Q7Z6I5 190 aa10.28□□□□□ -0.76
RAB40B-203ENST00000570676 C20orf78Q9BR46 151 aa10.28□□□□□ -0.76
RAB40B-203ENST00000570676 SDHAF1A6NFY7 115 aa10.27□□□□□ -0.77
RAB40B-203ENST00000570676 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
RAB40B-203ENST00000570676 SUMO2P61956 95 aaKnown RBP10.27□□□□□ -0.77
RAB40B-203ENST00000570676 MAP1LC3AQ9H492 121 aa10.27□□□□□ -0.77
RAB40B-203ENST00000570676 ABCA13Q86UQ4 5058 aa10.26□□□□□ -0.77
RAB40B-203ENST00000570676 LOC389332A0A1B0GUA5 103 aa10.26□□□□□ -0.77
RAB40B-203ENST00000570676 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
RAB40B-203ENST00000570676 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
RAB40B-203ENST00000570676 ATP6V0E2Q8NHE4 81 aa10.26□□□□□ -0.77
RAB40B-203ENST00000570676 TMEM70Q9BUB7 260 aa10.26□□□□□ -0.77
RAB40B-203ENST00000570676 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
RAB40B-203ENST00000570676 POLR2KP53803 58 aaKnown RBP10.25□□□□□ -0.77
RAB40B-203ENST00000570676 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
RAB40B-203ENST00000570676 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
RAB40B-203ENST00000570676 SMIM2Q9BVW6 85 aa10.25□□□□□ -0.77
RAB40B-203ENST00000570676 KRTAP4-5Q9BYR2 181 aa10.25□□□□□ -0.77
RAB40B-203ENST00000570676 HSPG2P98160 4391 aa10.24□□□□□ -0.77
RAB40B-203ENST00000570676 DNAH5Q8TE73 4624 aa10.24□□□□□ -0.77
RAB40B-203ENST00000570676 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
RAB40B-203ENST00000570676 VCYO14598 125 aa10.24□□□□□ -0.77
RAB40B-203ENST00000570676 PMCHP20382 165 aa10.24□□□□□ -0.77
RAB40B-203ENST00000570676 RPL32P62910 135 aaKnown RBP10.24□□□□□ -0.77
RAB40B-203ENST00000570676 IQCJQ1A5X6 159 aa10.24□□□□□ -0.77
RAB40B-203ENST00000570676 DAZ4Q86SG3 579 aaKnown RBP10.24□□□□□ -0.77
RAB40B-203ENST00000570676 C18orf32Q8TCD1 76 aa10.24□□□□□ -0.77
RAB40B-203ENST00000570676 DAZ3Q9NR90 486 aaKnown RBP10.24□□□□□ -0.77
RAB40B-203ENST00000570676 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
RAB40B-203ENST00000570676 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
RAB40B-203ENST00000570676 I3L3M4 83 aa10.23□□□□□ -0.77
RAB40B-203ENST00000570676 DEFB104AQ8WTQ1 72 aa10.23□□□□□ -0.77
RAB40B-203ENST00000570676 IFI27P40305 119 aaPredicted RBP10.22□□□□□ -0.77
RAB40B-203ENST00000570676 Q8N8P6 123 aa10.22□□□□□ -0.77
RAB40B-203ENST00000570676 PRSS3P2Q8NHM4 247 aa10.22□□□□□ -0.77
RAB40B-203ENST00000570676 GTSF1LQ9H1H1 148 aa10.22□□□□□ -0.77
RAB40B-203ENST00000570676 NXT2Q9NPJ8 142 aaKnown RBP10.22□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 DNAH10OSP0CZ25 163 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 COTL1Q14019 142 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 KIR2DL4Q99706 377 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
RAB40B-203ENST00000570676 APOBP04114 4563 aaKnown RBP10.2□□□□□ -0.78
RAB40B-203ENST00000570676 TSHBP01222 138 aa10.2□□□□□ -0.78
RAB40B-203ENST00000570676 FCER1GP30273 86 aa10.2□□□□□ -0.78
RAB40B-203ENST00000570676 TIRAPP58753 221 aa10.2□□□□□ -0.78
RAB40B-203ENST00000570676 Q0VG73 95 aa10.2□□□□□ -0.78
RAB40B-203ENST00000570676 BAGE3Q86Y29 109 aa10.2□□□□□ -0.78
RAB40B-203ENST00000570676 K7EP13 123 aa10.19□□□□□ -0.78
RAB40B-203ENST00000570676 TCAPO15273 167 aa10.19□□□□□ -0.78
RAB40B-203ENST00000570676 RAB5BP61020 215 aa10.19□□□□□ -0.78
RAB40B-203ENST00000570676 TMEM97Q5BJF2 176 aa10.19□□□□□ -0.78
RAB40B-203ENST00000570676 NTM-AS1Q6ZSK4 140 aa10.19□□□□□ -0.78
RAB40B-203ENST00000570676 FA2HQ7L5A8 372 aa10.19□□□□□ -0.78
RAB40B-203ENST00000570676 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
RAB40B-203ENST00000570676 RNASEKQ6P5S7 137 aaKnown RBP10.18□□□□□ -0.78
RAB40B-203ENST00000570676 NFE4Q86UQ8 179 aa10.18□□□□□ -0.78
RAB40B-203ENST00000570676 NIT1Q86X76 327 aa10.18□□□□□ -0.78
RAB40B-203ENST00000570676 MAPKAPK5-AS1Q8N8E1 139 aa10.18□□□□□ -0.78
RAB40B-203ENST00000570676 TRAV9-2A0A087WT02 112 aa10.17□□□□□ -0.78
RAB40B-203ENST00000570676 IGHV1-24A0A0C4DH33 117 aa10.17□□□□□ -0.78
RAB40B-203ENST00000570676 LINC00614P0C842 121 aa10.17□□□□□ -0.78
RAB40B-203ENST00000570676 AMTP48728 403 aa10.17□□□□□ -0.78
RAB40B-203ENST00000570676 URB1-AS1Q96HZ7 61 aa10.17□□□□□ -0.78
RAB40B-203ENST00000570676 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
RAB40B-203ENST00000570676 A0A087WTM6 91 aa10.16□□□□□ -0.78
RAB40B-203ENST00000570676 K7EMI3 77 aa10.16□□□□□ -0.78
RAB40B-203ENST00000570676 FUSP35637 526 aaKnown RBP eCLIP10.16□□□□□ -0.78
RAB40B-203ENST00000570676 LAGE3Q14657 143 aa10.16□□□□□ -0.78
RAB40B-203ENST00000570676 LELP1Q5T871 98 aa10.16□□□□□ -0.78
RAB40B-203ENST00000570676 C10orf126Q8N4M7 172 aa10.16□□□□□ -0.78
RAB40B-203ENST00000570676 AP5S1Q9NUS5 200 aa10.16□□□□□ -0.78
RAB40B-203ENST00000570676 LINC01546A6NGU7 62 aa10.15□□□□□ -0.78
RAB40B-203ENST00000570676 SERF1AO75920 110 aa10.15□□□□□ -0.78
RAB40B-203ENST00000570676 NDUFA6P56556 154 aa10.15□□□□□ -0.78
RAB40B-203ENST00000570676 ORMDL2Q53FV1 153 aa10.15□□□□□ -0.78
RAB40B-203ENST00000570676 LINC01556Q5JQF7 62 aa10.15□□□□□ -0.78
RAB40B-203ENST00000570676 CHCHD1Q96BP2 118 aaKnown RBP10.15□□□□□ -0.78
RAB40B-203ENST00000570676 TMEM243Q9BU79 118 aa10.15□□□□□ -0.78
RAB40B-203ENST00000570676 CHCHD7Q9BUK0 85 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms