RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 IGHV3-38A0A0C4DH36 116 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 I3L3M4 83 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 VCYO14598 125 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 UBE2L6O14933 153 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 AMTP48728 403 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 UBE2D3P61077 147 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 UBE2D2P62837 147 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 ZFAND6Q6FIF0 208 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 C18orf32Q8TCD1 76 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 TMEM70Q9BUB7 260 aa4.6□□□□□ -1.67
CTDNEP1-204ENST00000570484 TRBV25-1A0A075B6N4 114 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 TRBV27A0A0K0K1C4 114 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 HSBP1O75506 76 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 GAS8-AS1O95177 125 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 S100A6P06703 90 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 LINC00694P0DN24 101 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 TCTAP57738 103 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 RPL32P62910 135 aaKnown RBP4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 IQCJQ1A5X6 159 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 ORMDL2Q53FV1 153 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 UBE2DNLQ8IWF7 75 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 Q8N8P6 123 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 TMEM18Q96B42 140 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 GTSF1LQ9H1H1 148 aa4.59□□□□□ -1.67
CTDNEP1-204ENST00000570484 TRAV8-6A0A0B4J262 113 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 IGHV1-24A0A0C4DH33 117 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 K7EMI3 77 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BKO60814 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BJP06899 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BOP23527 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 G0S2P27469 103 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BBP33778 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 IFI27P40305 119 aaPredicted RBP4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 CCL18P55774 89 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BDP58876 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 PKIAP61925 76 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BCP62807 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 SMAGPQ0VAQ4 97 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST2H2BEQ16778 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BHQ93079 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 CHCHD1Q96BP2 118 aaKnown RBP4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BNQ99877 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 HIST1H2BMQ99879 126 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 CHCHD5Q9BSY4 110 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 TMEM243Q9BU79 118 aa4.58□□□□□ -1.68
CTDNEP1-204ENST00000570484 TRBV6-8A0A0A6YYG3 113 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 C3orf84H3BNL1 204 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 SERF1AO75920 110 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 TSHBP01222 138 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 LINC00614P0C842 121 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 BTF3P20290 206 aaKnown RBP4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 POLR2KP53803 58 aaKnown RBP4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 Q0VG73 95 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 LAGE3Q14657 143 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 AMMECR1LQ6DCA0 310 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 DEFB104AQ8WTQ1 72 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 Q9UF83 564 aa4.57□□□□□ -1.68
CTDNEP1-204ENST00000570484 A0A087WX48 190 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 LINC01549A6NIU2 74 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 PRSS47A8MTI9 375 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 HBDP02042 147 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 NDUFA6P56556 154 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 TIRAPP58753 221 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 LELP1Q5T871 98 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 TMEM101Q96IK0 257 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 CYSLTR1Q9Y271 337 aa4.56□□□□□ -1.68
CTDNEP1-204ENST00000570484 MUC4Q99102 2169 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 NBEAL2Q6ZNJ1 2754 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 IGLV2-18A0A075B6J9 118 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 IGKV2-29A2NJV5 120 aaPredicted RBP4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 TMEM262E9PQX1 116 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 S100A2P29034 98 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 DGAT2L7PQ6IED9 249 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 LYPD5Q6UWN5 251 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 Q6ZN92 141 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 NIT1Q86X76 327 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 APLNQ9ULZ1 77 aa4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 MRPS16Q9Y3D3 137 aaKnown RBP4.55□□□□□ -1.68
CTDNEP1-204ENST00000570484 TENM3Q9P273 2699 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 H7C423 109 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 CRPP02741 224 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 ZNF25P17030 456 aaPredicted RBP4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 GAGE6Q13070 117 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 PMCHL1Q16048 86 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 ESRGQ1W209 222 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 RNF151Q2KHN1 245 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 CASC10Q5T4H9 136 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 C2orf66Q6UXQ4 117 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 C20orf203Q8NBC4 194 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 OR5A1Q8NGJ0 315 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 SPANXA1Q9NS26 97 aa4.54□□□□□ -1.68
CTDNEP1-204ENST00000570484 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 PRKDCP78527 4128 aaKnown RBP4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 SIVA1O15304 175 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 FGF6P10767 208 aa4.53□□□□□ -1.68
CTDNEP1-204ENST00000570484 RPL39P62891 51 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms