RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 APOC4P55056 127 aa5.94□□□□□ -1.46
TCF4-246ENST00000570287 ERCC8Q13216 396 aa5.94□□□□□ -1.46
TCF4-246ENST00000570287 Q6ZQT7 251 aa5.94□□□□□ -1.46
TCF4-246ENST00000570287 RNF182Q8N6D2 247 aa5.94□□□□□ -1.46
TCF4-246ENST00000570287 IGHV3-30P01768 117 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 P0DMU3 169 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 FAM231AP0DMU4 169 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 FAM231CP0DMU5 169 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 IGHV3-30-5P0DP03 117 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 IGHV4-38-2P0DP08 117 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 TOMM6Q96B49 74 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 IGHV4-30-2A0A087WSY4 118 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 A0A0J9YY99 117 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 A6NDX4 124 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 IGHG2P01859 326 aa5.93□□□□□ -1.46
TCF4-246ENST00000570287 IGHV3OR16-13A0A075B7E8 117 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 IGHV3-74A0A0B4J1X5 117 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 TRBV7-7A0A0K0K1E9 115 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 FAM236AA0A1B0GUQ0 79 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 FAM236BA0A1B0GV22 79 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 MSMBP08118 114 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 USMG5Q96IX5 58 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 AGPAT4-IT1Q9H0P7 198 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 LINC00527Q9UJ94 153 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 FAM240AA0A1B0GVK7 77 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 ZNF815PA8K554 130 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 NDUFA4O00483 81 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 DUSP14O95147 198 aaKnown RBP5.92□□□□□ -1.46
TCF4-246ENST00000570287 SRSF9Q13242 221 aaKnown RBP eCLIP5.92□□□□□ -1.46
TCF4-246ENST00000570287 C9orf47Q6ZRZ4 202 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 DPH3Q96FX2 82 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
TCF4-246ENST00000570287 KMT2BQ9UMN6 2715 aaPredicted RBP5.92□□□□□ -1.46
TCF4-246ENST00000570287 IGHV4-4A0A075B6R2 117 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 IGHV3-49A0A0A0MS15 119 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 H3BUX3 64 aa5.92□□□□□ -1.46
TCF4-246ENST00000570287 H3BVH4 76 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 J3QQQ9 107 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 DSCR9P59020 149 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 LY6EQ16553 131 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 LINC00526Q96FQ7 95 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 PRO1854Q9UHT4 67 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 PYGO1Q9Y3Y4 419 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 CFAP46Q8IYW2 2715 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 BAHCC1Q9P281 2608 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 B4DSR2 109 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 SFTA2Q6UW10 78 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 SLC25A29Q8N8R3 303 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 LENEPQ9Y5L5 61 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 VPS13CQ709C8 3753 aa5.91□□□□□ -1.46
TCF4-246ENST00000570287 LGALS9O00182 355 aa5.9□□□□□ -1.46
TCF4-246ENST00000570287 DEFB121Q5J5C9 76 aa5.9□□□□□ -1.46
TCF4-246ENST00000570287 C15orf53Q8NAA6 179 aa5.9□□□□□ -1.46
TCF4-246ENST00000570287 IGKV3D-20A0A0C4DH25 116 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 C3orf22Q8N5N4 141 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 AMELXQ99217 191 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 DOPEY1Q5JWR5 2465 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 RBMY1BA6NDE4 496 aaKnown RBP5.9□□□□□ -1.47
TCF4-246ENST00000570287 RBMY1EA6NEQ0 496 aaKnown RBP5.9□□□□□ -1.47
TCF4-246ENST00000570287 OVOL1O14753 267 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 TRBV12-3P01733 135 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 RBMY1DP0C7P1 496 aaKnown RBP5.9□□□□□ -1.47
TCF4-246ENST00000570287 RBMY1A1P0DJD3 496 aaKnown RBP5.9□□□□□ -1.47
TCF4-246ENST00000570287 NSUN5P1Q3KNT7 163 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 ORMDL2Q53FV1 153 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 UNQ9165/PRO28630Q6UXU0 137 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 SCGB1D4Q6XE38 83 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 PRIMA1Q86XR5 153 aa5.9□□□□□ -1.47
TCF4-246ENST00000570287 TRAV8-4A0A0B4J246 113 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 A0A0B4J2C4 111 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 EPM2AB3EWF7 344 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 TMEM263Q8WUH6 116 aaKnown RBP5.89□□□□□ -1.47
TCF4-246ENST00000570287 SMIM2Q9BVW6 85 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 SPANXDQ9BXN6 97 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 ZNF580Q9UK33 172 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 SPTAN1Q13813 2472 aaKnown RBP5.89□□□□□ -1.47
TCF4-246ENST00000570287 ZFHX3Q15911 3703 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 IGHV3-33P01772 117 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 BLCAPP62952 87 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 POM121L12Q8N7R1 296 aa5.89□□□□□ -1.47
TCF4-246ENST00000570287 NTN5Q8WTR8 489 aaPredicted RBP5.89□□□□□ -1.47
TCF4-246ENST00000570287 IGHV7-4-1A0A0J9YVY3 117 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 SOCS3O14543 225 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 GPHB5Q86YW7 130 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 IMUPQ9GZP8 106 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 IGSF10Q6WRI0 2623 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 IGLV4-69A0A075B6H9 119 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 TRBV10-2A0A0K0K1G8 114 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 TEX49A0A1B0GTD5 131 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 UQCRQO14949 82 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 SCGB3A1Q96QR1 104 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 TRAV2A0A0B4J234 112 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 TSHBP01222 138 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 IGHV3-11P01762 117 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 CRYGAP11844 174 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 ATXN8Q156A1 80 aa5.88□□□□□ -1.47
TCF4-246ENST00000570287 PFN2P35080 140 aa5.87□□□□□ -1.47
TCF4-246ENST00000570287 KLHL30-AS1Q8NEE0 82 aa5.87□□□□□ -1.47
TCF4-246ENST00000570287 CHCHD5Q9BSY4 110 aa5.87□□□□□ -1.47
TCF4-246ENST00000570287 COL12A1Q99715 3063 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms