RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 TEX46H3BTG2 121 aa13.36□□□□□ -0.27
PKD1-240ENST00000570253 RPS10P46783 165 aaKnown RBP13.36□□□□□ -0.27
PKD1-240ENST00000570253 CENPWQ5EE01 88 aa13.36□□□□□ -0.27
PKD1-240ENST00000570253 SMIM12Q96EX1 92 aa13.36□□□□□ -0.27
PKD1-240ENST00000570253 BIN3Q9NQY0 253 aa13.36□□□□□ -0.27
PKD1-240ENST00000570253 GAGE12HA6NDE8 117 aa13.35□□□□□ -0.27
PKD1-240ENST00000570253 NDUFS6O75380 124 aaKnown RBP13.35□□□□□ -0.27
PKD1-240ENST00000570253 AMMECR1LQ6DCA0 310 aa13.35□□□□□ -0.27
PKD1-240ENST00000570253 GTSF1Q8WW33 167 aa13.35□□□□□ -0.27
PKD1-240ENST00000570253 C11orf52Q96A22 123 aa13.35□□□□□ -0.27
PKD1-240ENST00000570253 GNG13Q9P2W3 67 aa13.35□□□□□ -0.27
PKD1-240ENST00000570253 PKIGQ9Y2B9 76 aa13.35□□□□□ -0.27
PKD1-240ENST00000570253 IGKV3OR2-268A0A0C4DH90 116 aa13.34□□□□□ -0.27
PKD1-240ENST00000570253 IFNA1P01562 189 aa13.34□□□□□ -0.27
PKD1-240ENST00000570253 GNG4P50150 75 aa13.34□□□□□ -0.27
PKD1-240ENST00000570253 MAJINQ3KP22 176 aa13.34□□□□□ -0.27
PKD1-240ENST00000570253 GFRA4Q9GZZ7 299 aa13.34□□□□□ -0.27
PKD1-240ENST00000570253 BCL2L11O43521 198 aa13.33□□□□□ -0.28
PKD1-240ENST00000570253 SLPIP03973 132 aa13.33□□□□□ -0.28
PKD1-240ENST00000570253 COX6A2Q02221 97 aa13.33□□□□□ -0.28
PKD1-240ENST00000570253 SMLR1H3BR10 107 aa13.32□□□□□ -0.28
PKD1-240ENST00000570253 RGS21Q2M5E4 152 aa13.32□□□□□ -0.28
PKD1-240ENST00000570253 LYZL1Q6UWQ5 148 aa13.32□□□□□ -0.28
PKD1-240ENST00000570253 IGKV2-24A0A0C4DH68 120 aa13.31□□□□□ -0.28
PKD1-240ENST00000570253 C19orf71A6NCJ1 209 aa13.31□□□□□ -0.28
PKD1-240ENST00000570253 NTF3P20783 257 aa13.31□□□□□ -0.28
PKD1-240ENST00000570253 CCL20P78556 96 aa13.31□□□□□ -0.28
PKD1-240ENST00000570253 HIGD2BQ4VC39 106 aa13.31□□□□□ -0.28
PKD1-240ENST00000570253 C15orf56Q8N910 161 aa13.31□□□□□ -0.28
PKD1-240ENST00000570253 HMSDA8MTL9 139 aa13.3□□□□□ -0.28
PKD1-240ENST00000570253 PDE6DO43924 150 aa13.29□□□□□ -0.28
PKD1-240ENST00000570253 TWIST1Q15672 202 aa13.29□□□□□ -0.28
PKD1-240ENST00000570253 RNASEKQ6P5S7 137 aaKnown RBP13.29□□□□□ -0.28
PKD1-240ENST00000570253 SMIM15Q7Z3B0 74 aa13.29□□□□□ -0.28
PKD1-240ENST00000570253 STPG4Q8N801 248 aa13.29□□□□□ -0.28
PKD1-240ENST00000570253 LINC00474Q9P2X8 69 aa13.29□□□□□ -0.28
PKD1-240ENST00000570253 CHCHD10Q8WYQ3 142 aaPredicted RBP13.28□□□□□ -0.28
PKD1-240ENST00000570253 NCR2O95944 276 aa13.27□□□□□ -0.29
PKD1-240ENST00000570253 APCSP02743 223 aa13.27□□□□□ -0.29
PKD1-240ENST00000570253 PRR3P79522 188 aaKnown RBP13.27□□□□□ -0.29
PKD1-240ENST00000570253 EIF5AL1Q6IS14 154 aaKnown RBP13.27□□□□□ -0.29
PKD1-240ENST00000570253 REG3GQ6UW15 175 aa13.27□□□□□ -0.29
PKD1-240ENST00000570253 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.29
PKD1-240ENST00000570253 LYPD6BQ8NI32 183 aa13.27□□□□□ -0.29
PKD1-240ENST00000570253 LINC01600Q96MT4 127 aa13.27□□□□□ -0.29
PKD1-240ENST00000570253 MED9Q9NWA0 146 aa13.27□□□□□ -0.29
PKD1-240ENST00000570253 RAB19A4D1S5 217 aa13.26□□□□□ -0.29
PKD1-240ENST00000570253 H7C423 109 aa13.26□□□□□ -0.29
PKD1-240ENST00000570253 C9orf62Q8N4C0 152 aa13.26□□□□□ -0.29
PKD1-240ENST00000570253 BTF3L4Q96K17 158 aa13.26□□□□□ -0.29
PKD1-240ENST00000570253 GVQW2A0A096LPI5 108 aaPredicted RBP13.25□□□□□ -0.29
PKD1-240ENST00000570253 TRAV1-1A0A0B4J248 108 aa13.25□□□□□ -0.29
PKD1-240ENST00000570253 MEF2BQ02080 365 aaPredicted RBP13.25□□□□□ -0.29
PKD1-240ENST00000570253 CTRLP40313 264 aa13.24□□□□□ -0.29
PKD1-240ENST00000570253 TEX261Q6UWH6 196 aa13.24□□□□□ -0.29
PKD1-240ENST00000570253 TMEM101Q96IK0 257 aa13.24□□□□□ -0.29
PKD1-240ENST00000570253 ZNF25P17030 456 aaPredicted RBP13.23□□□□□ -0.29
PKD1-240ENST00000570253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
PKD1-240ENST00000570253 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
PKD1-240ENST00000570253 FGF6P10767 208 aa13.22□□□□□ -0.29
PKD1-240ENST00000570253 SPINK6Q6UWN8 80 aa13.22□□□□□ -0.29
PKD1-240ENST00000570253 GATD1Q8NB37 220 aa13.22□□□□□ -0.29
PKD1-240ENST00000570253 TNXBP22105 4242 aa13.21□□□□□ -0.29
PKD1-240ENST00000570253 TRAV26-2A0A0B4J265 109 aa13.21□□□□□ -0.29
PKD1-240ENST00000570253 NUDT10Q8NFP7 164 aa13.21□□□□□ -0.29
PKD1-240ENST00000570253 NUDT11Q96G61 164 aa13.21□□□□□ -0.29
PKD1-240ENST00000570253 CNFNQ9BYD5 112 aa13.21□□□□□ -0.29
PKD1-240ENST00000570253 RPP21Q9H633 154 aaKnown RBP13.21□□□□□ -0.29
PKD1-240ENST00000570253 A0A096LNI7 61 aa13.2□□□□□ -0.3
PKD1-240ENST00000570253 A0A0J9YXV3 536 aa13.2□□□□□ -0.3
PKD1-240ENST00000570253 Q6ZNX1 250 aa13.2□□□□□ -0.3
PKD1-240ENST00000570253 OR5A1Q8NGJ0 315 aa13.2□□□□□ -0.3
PKD1-240ENST00000570253 IGHV1-58A0A0C4DH39 117 aa13.19□□□□□ -0.3
PKD1-240ENST00000570253 SDHAF1A6NFY7 115 aa13.19□□□□□ -0.3
PKD1-240ENST00000570253 PMCHP20382 165 aa13.19□□□□□ -0.3
PKD1-240ENST00000570253 XCL1P47992 114 aa13.19□□□□□ -0.3
PKD1-240ENST00000570253 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
PKD1-240ENST00000570253 LRP2P98164 4655 aa13.18□□□□□ -0.3
PKD1-240ENST00000570253 BCL2P10415 239 aa13.18□□□□□ -0.3
PKD1-240ENST00000570253 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
PKD1-240ENST00000570253 FOXI1Q12951 378 aa13.18□□□□□ -0.3
PKD1-240ENST00000570253 Q6ZRP5 223 aa13.18□□□□□ -0.3
PKD1-240ENST00000570253 TRBV20OR9-2A0A075B6H5 130 aa13.17□□□□□ -0.3
PKD1-240ENST00000570253 I3L3M4 83 aa13.17□□□□□ -0.3
PKD1-240ENST00000570253 ZNF561-AS1K7EIQ3 104 aa13.17□□□□□ -0.3
PKD1-240ENST00000570253 SS18Q15532 418 aa13.17□□□□□ -0.3
PKD1-240ENST00000570253 RPL39LQ96EH5 51 aaKnown RBP13.17□□□□□ -0.3
PKD1-240ENST00000570253 CCL25O15444 150 aa13.16□□□□□ -0.3
PKD1-240ENST00000570253 RNF213Q63HN8 5207 aa13.16□□□□□ -0.3
PKD1-240ENST00000570253 ISOC2Q96AB3 205 aa13.15□□□□□ -0.3
PKD1-240ENST00000570253 BORCS7Q96B45 105 aa13.15□□□□□ -0.3
PKD1-240ENST00000570253 FAM210AQ96ND0 272 aa13.15□□□□□ -0.3
PKD1-240ENST00000570253 RNASE7Q9H1E1 156 aaKnown RBP13.15□□□□□ -0.3
PKD1-240ENST00000570253 LINC00959A0A1B0GUT2 108 aa13.14□□□□□ -0.31
PKD1-240ENST00000570253 MRAP2Q96G30 205 aa13.14□□□□□ -0.31
PKD1-240ENST00000570253 SYCNQ0VAF6 134 aa13.13□□□□□ -0.31
PKD1-240ENST00000570253 ST20Q9HBF5 79 aa13.11□□□□□ -0.31
PKD1-240ENST00000570253 LOC107984640A0A0U1RRK4 108 aa13.1□□□□□ -0.31
PKD1-240ENST00000570253 A8MWL6 223 aa13.1□□□□□ -0.31
PKD1-240ENST00000570253 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms