RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 RHOHQ15669 191 aa9.91□□□□□ -0.82
COMMD4-225ENST00000569245 SH2D6Q7Z4S9 175 aa9.91□□□□□ -0.82
COMMD4-225ENST00000569245 PRADC1Q9BSG0 188 aa9.91□□□□□ -0.82
COMMD4-225ENST00000569245 ST20Q9HBF5 79 aa9.91□□□□□ -0.82
COMMD4-225ENST00000569245 PKD1P98161 4303 aa9.9□□□□□ -0.82
COMMD4-225ENST00000569245 SUMO2P61956 95 aaKnown RBP9.9□□□□□ -0.82
COMMD4-225ENST00000569245 RPL32P62910 135 aaKnown RBP9.9□□□□□ -0.82
COMMD4-225ENST00000569245 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
COMMD4-225ENST00000569245 MAP1LC3AQ9H492 121 aa9.9□□□□□ -0.82
COMMD4-225ENST00000569245 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
COMMD4-225ENST00000569245 POLR2KP53803 58 aaKnown RBP9.89□□□□□ -0.83
COMMD4-225ENST00000569245 Q9UF83 564 aa9.89□□□□□ -0.83
COMMD4-225ENST00000569245 TNFRSF18Q9Y5U5 241 aa9.89□□□□□ -0.83
COMMD4-225ENST00000569245 RPL36AP83881 106 aaKnown RBP9.88□□□□□ -0.83
COMMD4-225ENST00000569245 IQCJQ1A5X6 159 aa9.88□□□□□ -0.83
COMMD4-225ENST00000569245 COA6Q5JTJ3 125 aaKnown RBP9.88□□□□□ -0.83
COMMD4-225ENST00000569245 RPL36ALQ969Q0 106 aaKnown RBP9.88□□□□□ -0.83
COMMD4-225ENST00000569245 TRBV7-3A0A075B6L6 115 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 SDHAF1A6NFY7 115 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 LINC00694P0DN24 101 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 BAGE3Q86Y29 109 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 Q8N8P6 123 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 TMEM70Q9BUB7 260 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 SMIM2Q9BVW6 85 aa9.87□□□□□ -0.83
COMMD4-225ENST00000569245 NXT2Q9NPJ8 142 aaKnown RBP9.87□□□□□ -0.83
COMMD4-225ENST00000569245 KIAA1109Q2LD37 5005 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 LOC389332A0A1B0GUA5 103 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 VCYO14598 125 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 BTF3P20290 206 aaKnown RBP9.86□□□□□ -0.83
COMMD4-225ENST00000569245 PMCHP20382 165 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 IFI27P40305 119 aaPredicted RBP9.86□□□□□ -0.83
COMMD4-225ENST00000569245 UBE2D3P61077 147 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 UBE2D2P62837 147 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 WFDC10BQ8IUB3 73 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
COMMD4-225ENST00000569245 HERC2O95714 4834 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 GAGE12JA6NER3 117 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 LINC01546A6NGU7 62 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 LINC00614P0C842 121 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 NDUFA6P56556 154 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 GAGE1Q13065 139 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 GAGE4Q13068 117 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 GAGE5Q13069 117 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 GAGE13Q4V321 117 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 NIT1Q86X76 327 aa9.85□□□□□ -0.83
COMMD4-225ENST00000569245 DYNC1H1Q14204 4646 aaKnown RBP9.85□□□□□ -0.83
COMMD4-225ENST00000569245 TRAV8-6A0A0B4J262 113 aa9.84□□□□□ -0.83
COMMD4-225ENST00000569245 I3L3M4 83 aa9.84□□□□□ -0.83
COMMD4-225ENST00000569245 K7EMI3 77 aa9.84□□□□□ -0.83
COMMD4-225ENST00000569245 LINC00310P59036 64 aa9.84□□□□□ -0.83
COMMD4-225ENST00000569245 DAZ4Q86SG3 579 aaKnown RBP9.84□□□□□ -0.83
COMMD4-225ENST00000569245 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
COMMD4-225ENST00000569245 CHCHD1Q96BP2 118 aaKnown RBP9.84□□□□□ -0.83
COMMD4-225ENST00000569245 DAZ3Q9NR90 486 aaKnown RBP9.84□□□□□ -0.83
COMMD4-225ENST00000569245 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
COMMD4-225ENST00000569245 DNAH11Q96DT5 4516 aa9.84□□□□□ -0.83
COMMD4-225ENST00000569245 C16orf90A8MZG2 172 aa9.83□□□□□ -0.84
COMMD4-225ENST00000569245 SERF1AO75920 110 aa9.83□□□□□ -0.84
COMMD4-225ENST00000569245 S100A6P06703 90 aa9.83□□□□□ -0.84
COMMD4-225ENST00000569245 ESDP10768 282 aa9.83□□□□□ -0.84
COMMD4-225ENST00000569245 TIRAPP58753 221 aa9.83□□□□□ -0.84
COMMD4-225ENST00000569245 FA2HQ7L5A8 372 aa9.83□□□□□ -0.84
COMMD4-225ENST00000569245 K7EP13 123 aa9.82□□□□□ -0.84
COMMD4-225ENST00000569245 TCAPO15273 167 aa9.82□□□□□ -0.84
COMMD4-225ENST00000569245 DNAH10OSP0CZ25 163 aa9.82□□□□□ -0.84
COMMD4-225ENST00000569245 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
COMMD4-225ENST00000569245 NFE4Q86UQ8 179 aa9.82□□□□□ -0.84
COMMD4-225ENST00000569245 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
COMMD4-225ENST00000569245 GTSF1LQ9H1H1 148 aa9.82□□□□□ -0.84
COMMD4-225ENST00000569245 AP5S1Q9NUS5 200 aa9.82□□□□□ -0.84
COMMD4-225ENST00000569245 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
COMMD4-225ENST00000569245 NUPR1O60356 82 aa9.81□□□□□ -0.84
COMMD4-225ENST00000569245 SPATA12Q7Z6I5 190 aa9.81□□□□□ -0.84
COMMD4-225ENST00000569245 C10orf126Q8N4M7 172 aa9.81□□□□□ -0.84
COMMD4-225ENST00000569245 C5orf52A6NGY3 159 aa9.8□□□□□ -0.84
COMMD4-225ENST00000569245 TSHBP01222 138 aa9.8□□□□□ -0.84
COMMD4-225ENST00000569245 LAGE3Q14657 143 aa9.8□□□□□ -0.84
COMMD4-225ENST00000569245 ORMDL2Q53FV1 153 aa9.8□□□□□ -0.84
COMMD4-225ENST00000569245 TMEM97Q5BJF2 176 aa9.8□□□□□ -0.84
COMMD4-225ENST00000569245 LELP1Q5T871 98 aa9.8□□□□□ -0.84
COMMD4-225ENST00000569245 EREGO14944 169 aa9.79□□□□□ -0.84
COMMD4-225ENST00000569245 HSBP1O75506 76 aa9.79□□□□□ -0.84
COMMD4-225ENST00000569245 COTL1Q14019 142 aa9.79□□□□□ -0.84
COMMD4-225ENST00000569245 Q6ZRN7 208 aaPredicted RBP9.79□□□□□ -0.84
COMMD4-225ENST00000569245 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
COMMD4-225ENST00000569245 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
COMMD4-225ENST00000569245 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
COMMD4-225ENST00000569245 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
COMMD4-225ENST00000569245 FCER1GP30273 86 aa9.78□□□□□ -0.84
COMMD4-225ENST00000569245 SNRPEP62304 92 aaKnown RBP9.78□□□□□ -0.84
COMMD4-225ENST00000569245 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
COMMD4-225ENST00000569245 G0S2P27469 103 aa9.77□□□□□ -0.85
COMMD4-225ENST00000569245 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.85
COMMD4-225ENST00000569245 A0A096LNJ9 63 aa9.76□□□□□ -0.85
COMMD4-225ENST00000569245 IGHV1-24A0A0C4DH33 117 aa9.76□□□□□ -0.85
COMMD4-225ENST00000569245 KRTAP10-2P60368 255 aa9.76□□□□□ -0.85
COMMD4-225ENST00000569245 NTM-AS1Q6ZSK4 140 aa9.76□□□□□ -0.85
COMMD4-225ENST00000569245 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms