RNA–Protein interactions for RNA: ENST00000569074.1

CASC17-201, Transcript of cancer susceptibility 17, humanhuman

TSL 1 (best) BASIC

Gene CASC17, Length 2,059 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC17-201ENST00000569074 IGHV3-64A0A075B6Q5 118 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 IGLV5-52A0A0A0MRZ9 124 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 M0R1W7 72 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
CASC17-201ENST00000569074 MRPS36P82909 103 aaKnown RBP3.83□□□□□ -1.8
CASC17-201ENST00000569074 C9orf139Q6ZV77 190 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 GPHB5Q86YW7 130 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 RPL36ALQ969Q0 106 aaKnown RBP3.83□□□□□ -1.8
CASC17-201ENST00000569074 C16orf95Q9H693 158 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 DNAJC13O75165 2243 aa3.83□□□□□ -1.8
CASC17-201ENST00000569074 VPS13AQ96RL7 3174 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHV4OR15-8A0A075B7B6 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 A0A087WW49 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 TRGV5A0A0B4J1U4 118 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHV3-72A0A0B4J1Y9 119 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 TRAV12-3A0A0B4J271 114 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHV3-30-3P0DP02 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 CCL3L1P16619 93 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 ADAMTSL4-AS1Q5T5F5 129 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 GFRALQ6UXV0 394 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 Q6ZS52 159 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 LINC01561Q8N1V8 128 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 RNF182Q8N6D2 247 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 LAMA1P25391 3075 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 EP300Q09472 2414 aaPredicted RBP3.82□□□□□ -1.8
CASC17-201ENST00000569074 PRRC2AP48634 2157 aaKnown RBP3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 FAM223BA6NKX1 122 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 DNAL4O96015 105 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGLV1-44P01699 117 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 IGHG2P01859 326 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 POLR2KP53803 58 aaKnown RBP3.82□□□□□ -1.8
CASC17-201ENST00000569074 COPS9Q8WXC6 57 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 PHLDA3Q9Y5J5 127 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 SPEGQ15772 3267 aa3.82□□□□□ -1.8
CASC17-201ENST00000569074 NACAE9PAV3 2078 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 CFAP54Q96N23 3096 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 OTOGLQ3ZCN5 2332 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 A0A087WVE0 104 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1BA6NDE4 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1EA6NEQ0 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 KNCNA6PVL3 124 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 TIMM17BO60830 172 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1DP0C7P1 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1A1P0DJD3 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1CP0DJD4 496 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 S100A4P26447 101 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 RBMY1FQ15415 496 aaKnown RBP3.81□□□□□ -1.8
CASC17-201ENST00000569074 FAM223AQ8IWN6 122 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 WFDC11Q8NEX6 87 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 NUP37Q8NFH4 326 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 HES7Q9BYE0 225 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 NDUFA12Q9UI09 145 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 C22orf24Q9Y442 160 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 SLC25A15Q9Y619 301 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 TRIOO75962 3097 aa3.81□□□□□ -1.8
CASC17-201ENST00000569074 GCN1Q92616 2671 aaKnown RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 IGHV1-18A0A0C4DH31 117 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 A0A0J9YXV3 536 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 A0A0U1RQV1 116 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 C9orf47Q6ZRZ4 202 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 VSIG2Q96IQ7 327 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 ARRDC1-AS1Q9H2J1 176 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 Q9H8V8 135 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 UBE2D4Q9Y2X8 147 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 TEP1Q99973 2627 aaKnown RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 MALRD1Q5VYJ5 2156 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 ZFHX4Q86UP3 3567 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 IGLV5-37A0A075B6J1 123 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 TRBV27A0A0K0K1C4 114 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 XCL1P47992 114 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 FP248Q71RG6 208 aaPredicted RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 MRPL53Q96EL3 112 aaKnown RBP3.8□□□□□ -1.8
CASC17-201ENST00000569074 RNF5Q99942 180 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 ZNF580Q9UK33 172 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 LENEPQ9Y5L5 61 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 S4R3C0 116 aa3.8□□□□□ -1.8
CASC17-201ENST00000569074 IGHV1-58A0A0C4DH39 117 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 LOXP28300 417 aaPredicted RBP3.79□□□□□ -1.8
CASC17-201ENST00000569074 C6orf226Q5I0X4 101 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 C20orf197Q8N268 126 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 LINC00846Q9NV44 126 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 IGHV1-3A0A0C4DH29 117 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 TRBV6-5A0A0K0K1A5 114 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 H7BZZ5 65 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 NBR2O15453 112 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 NXPH4O95158 308 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 MDS2Q8NDY4 140 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 OPRPNQ99935 248 aaPredicted RBP3.79□□□□□ -1.8
CASC17-201ENST00000569074 DEFB127Q9H1M4 99 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 KIF25-AS1Q9Y6Z4 181 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 U3KQA8 63 aa3.79□□□□□ -1.8
CASC17-201ENST00000569074 WDFY3Q8IZQ1 3526 aa3.78□□□□□ -1.8
CASC17-201ENST00000569074 CEP250Q9BV73 2442 aa3.78□□□□□ -1.8
CASC17-201ENST00000569074 IGLV11-55A0A075B6I3 123 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms